EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000026310 (Gene tree)
Gene ID: 109986439
Gene Symbol: prpf3
Alias: HPRP3|wu:fa11f05
Full Name: pre-mRNA processing factor 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6558 bases
Position: chrFKLU01000098.1:354851-361408
Accession: 109986439
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035086	PRP3	PF08572.10	7.7e-77	1	1
ENSLBEP00000035038	PRP3	PF08572.10	9.3e-77	1	1
ENSLBEP00000035058	PRP3	PF08572.10	9.7e-77	1	1
ENSLBEP00000035086	PWI	PF01480.17	1.1e-11	1	1
ENSLBEP00000035038	PWI	PF01480.17	1.2e-11	1	1
ENSLBEP00000035058	PWI	PF01480.17	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036533	-	3782	-	ENSLBEP00000035038	686 (aa)	-	-
ENSLBET00000036554	-	3447	XM_020637092	ENSLBEP00000035058	702 (aa)	XP_020492748	UPI0009B415F6
ENSLBET00000036582	-	1878	-	ENSLBEP00000035086	625 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000026310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026310's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026310	prpf3	99	71.186	ENSG00000117360	PRPF3	100	70.266	Homo_sapiens
ENSLBEG00000026310	prpf3	100	92.165	ENSAPOG00000015584	prpf3	100	92.023	Acanthochromis_polyacanthus
ENSLBEG00000026310	prpf3	99	71.328	ENSAMEG00000001630	PRPF3	100	70.407	Ailuropoda_melanoleuca
ENSLBEG00000026310	prpf3	100	96.739	ENSACIG00000007876	prpf3	100	89.773	Amphilophus_citrinellus
ENSLBEG00000026310	prpf3	100	91.880	ENSAOCG00000011449	prpf3	100	92.023	Amphiprion_ocellaris
ENSLBEG00000026310	prpf3	100	92.735	ENSATEG00000023583	prpf3	100	92.450	Anabas_testudineus
ENSLBEG00000026310	prpf3	99	72.521	ENSAPLG00000002440	PRPF3	100	71.388	Anas_platyrhynchos
ENSLBEG00000026310	prpf3	99	71.186	ENSACAG00000003176	PRPF3	100	70.588	Anolis_carolinensis
ENSLBEG00000026310	prpf3	99	71.186	ENSANAG00000026138	PRPF3	100	70.266	Aotus_nancymaae
ENSLBEG00000026310	prpf3	100	87.977	ENSACLG00000020127	prpf3	100	87.412	Astatotilapia_calliptera
ENSLBEG00000026310	prpf3	100	83.193	ENSAMXG00000007306	prpf3	100	82.584	Astyanax_mexicanus
ENSLBEG00000026310	prpf3	99	71.186	ENSBTAG00000013946	PRPF3	100	70.266	Bos_taurus
ENSLBEG00000026310	prpf3	85	40.868	WBGene00010844	prp-3	95	35.610	Caenorhabditis_elegans
ENSLBEG00000026310	prpf3	99	71.186	ENSCJAG00000009926	PRPF3	100	70.266	Callithrix_jacchus
ENSLBEG00000026310	prpf3	99	71.186	ENSCAFG00000011820	PRPF3	100	70.266	Canis_familiaris
ENSLBEG00000026310	prpf3	83	70.979	ENSCAFG00020019653	PRPF3	100	70.017	Canis_lupus_dingo
ENSLBEG00000026310	prpf3	99	71.186	ENSCHIG00000015434	PRPF3	100	70.266	Capra_hircus
ENSLBEG00000026310	prpf3	99	71.328	ENSTSYG00000001383	PRPF3	100	71.045	Carlito_syrichta
ENSLBEG00000026310	prpf3	92	63.875	ENSCAPG00000017812	PRPF3	95	64.426	Cavia_aperea
ENSLBEG00000026310	prpf3	99	71.186	ENSCPOG00000008068	PRPF3	100	70.904	Cavia_porcellus
ENSLBEG00000026310	prpf3	99	71.186	ENSCCAG00000026380	PRPF3	100	70.266	Cebus_capucinus
ENSLBEG00000026310	prpf3	99	59.046	ENSCATG00000041778	PRPF3	100	58.217	Cercocebus_atys
ENSLBEG00000026310	prpf3	99	71.328	ENSCLAG00000015009	PRPF3	100	70.407	Chinchilla_lanigera
ENSLBEG00000026310	prpf3	77	80.287	ENSCHOG00000011645	PRPF3	76	81.071	Choloepus_hoffmanni
ENSLBEG00000026310	prpf3	99	71.711	ENSCPBG00000008216	PRPF3	100	71.429	Chrysemys_picta_bellii
ENSLBEG00000026310	prpf3	66	59.375	ENSCING00000003312	-	99	59.375	Ciona_intestinalis
ENSLBEG00000026310	prpf3	85	55.413	ENSCSAVG00000008720	-	94	53.616	Ciona_savignyi
ENSLBEG00000026310	prpf3	99	70.621	ENSCANG00000036769	PRPF3	100	69.705	Colobus_angolensis_palliatus
ENSLBEG00000026310	prpf3	99	71.186	ENSCGRG00001019100	Prpf3	100	70.266	Cricetulus_griseus_chok1gshd
ENSLBEG00000026310	prpf3	99	71.186	ENSCGRG00000007322	Prpf3	100	70.266	Cricetulus_griseus_crigri
ENSLBEG00000026310	prpf3	100	87.188	ENSCSEG00000002532	prpf3	100	87.188	Cynoglossus_semilaevis
ENSLBEG00000026310	prpf3	100	89.031	ENSCVAG00000009318	prpf3	100	88.889	Cyprinodon_variegatus
ENSLBEG00000026310	prpf3	100	80.512	ENSDARG00000086425	prpf3	100	80.512	Danio_rerio
ENSLBEG00000026310	prpf3	99	73.676	ENSDNOG00000005904	PRPF3	100	73.717	Dasypus_novemcinctus
ENSLBEG00000026310	prpf3	93	71.017	ENSDORG00000008664	Prpf3	100	70.136	Dipodomys_ordii
ENSLBEG00000026310	prpf3	91	50.586	FBgn0036915	Prp3	96	49.917	Drosophila_melanogaster
ENSLBEG00000026310	prpf3	99	71.328	ENSETEG00000019124	PRPF3	100	70.547	Echinops_telfairi
ENSLBEG00000026310	prpf3	100	62.115	ENSEBUG00000011680	prpf3	100	60.992	Eptatretus_burgeri
ENSLBEG00000026310	prpf3	99	71.045	ENSEASG00005001566	PRPF3	100	70.126	Equus_asinus_asinus
ENSLBEG00000026310	prpf3	99	71.186	ENSECAG00000019840	PRPF3	100	70.266	Equus_caballus
ENSLBEG00000026310	prpf3	83	72.851	ENSEEUG00000007338	PRPF3	85	72.624	Erinaceus_europaeus
ENSLBEG00000026310	prpf3	100	76.771	ENSELUG00000013624	prpf3	100	76.771	Esox_lucius
ENSLBEG00000026310	prpf3	99	71.186	ENSFCAG00000013940	PRPF3	100	70.266	Felis_catus
ENSLBEG00000026310	prpf3	99	71.751	ENSFDAG00000010365	PRPF3	100	70.827	Fukomys_damarensis
ENSLBEG00000026310	prpf3	100	87.464	ENSFHEG00000021746	prpf3	100	86.610	Fundulus_heteroclitus
ENSLBEG00000026310	prpf3	100	84.495	ENSGMOG00000008535	prpf3	100	84.495	Gadus_morhua
ENSLBEG00000026310	prpf3	99	72.663	ENSGALG00000028205	PRPF3	100	71.530	Gallus_gallus
ENSLBEG00000026310	prpf3	100	87.179	ENSGAFG00000012671	prpf3	100	86.325	Gambusia_affinis
ENSLBEG00000026310	prpf3	100	92.391	ENSGACG00000011792	prpf3	100	89.886	Gasterosteus_aculeatus
ENSLBEG00000026310	prpf3	99	71.711	ENSGAGG00000013765	PRPF3	100	74.291	Gopherus_agassizii
ENSLBEG00000026310	prpf3	86	77.059	ENSGGOG00000013174	PRPF3	100	77.713	Gorilla_gorilla
ENSLBEG00000026310	prpf3	100	88.402	ENSHBUG00000003493	prpf3	100	87.836	Haplochromis_burtoni
ENSLBEG00000026310	prpf3	99	71.328	ENSHGLG00000016569	PRPF3	100	70.407	Heterocephalus_glaber_female
ENSLBEG00000026310	prpf3	99	54.071	ENSHGLG00000016033	-	100	54.083	Heterocephalus_glaber_female
ENSLBEG00000026310	prpf3	99	71.328	ENSHGLG00100007590	PRPF3	100	70.407	Heterocephalus_glaber_male
ENSLBEG00000026310	prpf3	99	54.290	ENSHGLG00100008951	-	100	54.219	Heterocephalus_glaber_male
ENSLBEG00000026310	prpf3	100	83.569	ENSHCOG00000014058	prpf3	100	83.428	Hippocampus_comes
ENSLBEG00000026310	prpf3	100	82.178	ENSIPUG00000000902	PRPF3	100	81.612	Ictalurus_punctatus
ENSLBEG00000026310	prpf3	99	71.186	ENSSTOG00000001889	PRPF3	100	70.266	Ictidomys_tridecemlineatus
ENSLBEG00000026310	prpf3	100	95.652	ENSKMAG00000001390	prpf3	100	89.841	Kryptolebias_marmoratus
ENSLBEG00000026310	prpf3	93	66.214	ENSLACG00000010541	PRPF3	100	65.913	Latimeria_chalumnae
ENSLBEG00000026310	prpf3	99	71.186	ENSLAFG00000004713	PRPF3	100	70.266	Loxodonta_africana
ENSLBEG00000026310	prpf3	99	71.186	ENSMFAG00000039791	PRPF3	100	70.266	Macaca_fascicularis
ENSLBEG00000026310	prpf3	92	70.788	ENSMMUG00000016301	PRPF3	97	70.892	Macaca_mulatta
ENSLBEG00000026310	prpf3	99	71.186	ENSMNEG00000038161	PRPF3	100	70.266	Macaca_nemestrina
ENSLBEG00000026310	prpf3	86	77.059	ENSMLEG00000040609	PRPF3	100	77.713	Mandrillus_leucophaeus
ENSLBEG00000026310	prpf3	98	49.288	ENSMLEG00000041065	-	97	48.624	Mandrillus_leucophaeus
ENSLBEG00000026310	prpf3	100	94.565	ENSMAMG00000014968	prpf3	100	91.181	Mastacembelus_armatus
ENSLBEG00000026310	prpf3	100	91.040	ENSMZEG00005015970	prpf3	100	90.469	Maylandia_zebra
ENSLBEG00000026310	prpf3	99	72.663	ENSMGAG00000000707	PRPF3	100	71.530	Meleagris_gallopavo
ENSLBEG00000026310	prpf3	99	71.186	ENSMAUG00000017112	Prpf3	100	70.266	Mesocricetus_auratus
ENSLBEG00000026310	prpf3	99	71.045	ENSMICG00000015386	PRPF3	100	73.982	Microcebus_murinus
ENSLBEG00000026310	prpf3	99	71.186	ENSMOCG00000000242	Prpf3	100	70.266	Microtus_ochrogaster
ENSLBEG00000026310	prpf3	100	84.485	ENSMMOG00000016131	prpf3	100	84.485	Mola_mola
ENSLBEG00000026310	prpf3	99	71.610	ENSMODG00000018774	PRPF3	100	70.687	Monodelphis_domestica
ENSLBEG00000026310	prpf3	100	85.795	ENSMALG00000007257	prpf3	100	85.755	Monopterus_albus
ENSLBEG00000026310	prpf3	99	71.186	MGP_CAROLIEiJ_G0025354	Prpf3	100	70.904	Mus_caroli
ENSLBEG00000026310	prpf3	99	71.186	ENSMUSG00000015748	Prpf3	100	70.904	Mus_musculus
ENSLBEG00000026310	prpf3	99	71.328	MGP_PahariEiJ_G0026798	Prpf3	100	70.863	Mus_pahari
ENSLBEG00000026310	prpf3	99	71.186	MGP_SPRETEiJ_G0026298	Prpf3	100	70.904	Mus_spretus
ENSLBEG00000026310	prpf3	99	69.405	ENSMPUG00000005080	PRPF3	100	68.258	Mustela_putorius_furo
ENSLBEG00000026310	prpf3	99	71.509	ENSMLUG00000004646	-	100	70.588	Myotis_lucifugus
ENSLBEG00000026310	prpf3	99	71.186	ENSNGAG00000000910	Prpf3	100	70.266	Nannospalax_galili
ENSLBEG00000026310	prpf3	100	89.733	ENSNBRG00000003462	prpf3	100	89.733	Neolamprologus_brichardi
ENSLBEG00000026310	prpf3	90	71.767	ENSNLEG00000009841	PRPF3	99	70.892	Nomascus_leucogenys
ENSLBEG00000026310	prpf3	83	63.824	ENSMEUG00000008733	PRPF3	89	64.118	Notamacropus_eugenii
ENSLBEG00000026310	prpf3	99	71.045	ENSOPRG00000010139	PRPF3	100	70.225	Ochotona_princeps
ENSLBEG00000026310	prpf3	99	71.368	ENSODEG00000011363	-	100	70.266	Octodon_degus
ENSLBEG00000026310	prpf3	99	53.566	ENSODEG00000014412	-	100	53.284	Octodon_degus
ENSLBEG00000026310	prpf3	100	90.896	ENSONIG00000006394	prpf3	100	90.896	Oreochromis_niloticus
ENSLBEG00000026310	prpf3	99	54.902	ENSOANG00000015441	PRPF3	100	54.457	Ornithorhynchus_anatinus
ENSLBEG00000026310	prpf3	99	71.186	ENSOCUG00000011760	PRPF3	100	70.266	Oryctolagus_cuniculus
ENSLBEG00000026310	prpf3	100	87.749	ENSORLG00000010330	prpf3	100	86.895	Oryzias_latipes
ENSLBEG00000026310	prpf3	100	87.749	ENSORLG00020009054	prpf3	100	86.895	Oryzias_latipes_hni
ENSLBEG00000026310	prpf3	100	87.464	ENSORLG00015015016	prpf3	100	86.610	Oryzias_latipes_hsok
ENSLBEG00000026310	prpf3	100	89.590	ENSOMEG00000000940	prpf3	100	89.590	Oryzias_melastigma
ENSLBEG00000026310	prpf3	99	67.278	ENSOGAG00000005352	PRPF3	100	66.387	Otolemur_garnettii
ENSLBEG00000026310	prpf3	99	71.186	ENSOARG00000020798	PRPF3	100	70.266	Ovis_aries
ENSLBEG00000026310	prpf3	98	54.806	ENSPPAG00000043769	-	99	53.904	Pan_paniscus
ENSLBEG00000026310	prpf3	99	71.045	ENSPPAG00000030983	PRPF3	100	70.126	Pan_paniscus
ENSLBEG00000026310	prpf3	99	71.186	ENSPPRG00000000731	PRPF3	100	70.266	Panthera_pardus
ENSLBEG00000026310	prpf3	99	71.186	ENSPTIG00000005516	PRPF3	100	70.266	Panthera_tigris_altaica
ENSLBEG00000026310	prpf3	99	71.186	ENSPTRG00000001254	PRPF3	100	70.266	Pan_troglodytes
ENSLBEG00000026310	prpf3	98	53.945	ENSPTRG00000047819	-	99	53.003	Pan_troglodytes
ENSLBEG00000026310	prpf3	99	71.045	ENSPANG00000000499	PRPF3	100	70.126	Papio_anubis
ENSLBEG00000026310	prpf3	100	85.714	ENSPKIG00000010501	prpf3	100	85.397	Paramormyrops_kingsleyae
ENSLBEG00000026310	prpf3	99	71.955	ENSPSIG00000014877	PRPF3	100	71.388	Pelodiscus_sinensis
ENSLBEG00000026310	prpf3	100	82.132	ENSPMGG00000007776	prpf3	100	81.975	Periophthalmus_magnuspinnatus
ENSLBEG00000026310	prpf3	99	71.186	ENSPEMG00000011672	Prpf3	100	70.266	Peromyscus_maniculatus_bairdii
ENSLBEG00000026310	prpf3	68	73.227	ENSPMAG00000005588	prpf3	97	73.227	Petromyzon_marinus
ENSLBEG00000026310	prpf3	99	71.610	ENSPCIG00000008795	PRPF3	100	70.687	Phascolarctos_cinereus
ENSLBEG00000026310	prpf3	100	89.130	ENSPFOG00000013638	prpf3	100	86.017	Poecilia_formosa
ENSLBEG00000026310	prpf3	100	89.130	ENSPLAG00000018103	prpf3	100	86.182	Poecilia_latipinna
ENSLBEG00000026310	prpf3	100	87.037	ENSPMEG00000023546	prpf3	100	86.467	Poecilia_mexicana
ENSLBEG00000026310	prpf3	100	89.130	ENSPREG00000017216	prpf3	100	86.325	Poecilia_reticulata
ENSLBEG00000026310	prpf3	93	70.152	ENSPPYG00000000900	PRPF3	99	69.173	Pongo_abelii
ENSLBEG00000026310	prpf3	78	62.454	ENSPPYG00000018646	-	99	62.268	Pongo_abelii
ENSLBEG00000026310	prpf3	85	75.181	ENSPCAG00000014908	PRPF3	87	71.498	Procavia_capensis
ENSLBEG00000026310	prpf3	99	71.045	ENSPCOG00000013828	PRPF3	100	70.126	Propithecus_coquereli
ENSLBEG00000026310	prpf3	99	71.045	ENSPVAG00000013472	PRPF3	100	70.225	Pteropus_vampyrus
ENSLBEG00000026310	prpf3	100	89.733	ENSPNYG00000004279	prpf3	100	89.733	Pundamilia_nyererei
ENSLBEG00000026310	prpf3	100	85.215	ENSPNAG00000001799	prpf3	100	84.897	Pygocentrus_nattereri
ENSLBEG00000026310	prpf3	99	71.328	ENSRNOG00000025629	Prpf3	100	71.045	Rattus_norvegicus
ENSLBEG00000026310	prpf3	83	69.504	ENSRBIG00000028854	PRPF3	98	71.127	Rhinopithecus_bieti
ENSLBEG00000026310	prpf3	99	71.186	ENSRROG00000027464	PRPF3	100	70.266	Rhinopithecus_roxellana
ENSLBEG00000026310	prpf3	99	64.972	ENSSBOG00000033104	PRPF3	100	64.095	Saimiri_boliviensis_boliviensis
ENSLBEG00000026310	prpf3	99	71.227	ENSSHAG00000009548	PRPF3	100	70.308	Sarcophilus_harrisii
ENSLBEG00000026310	prpf3	100	86.032	ENSSFOG00015022014	prpf3	100	85.873	Scleropages_formosus
ENSLBEG00000026310	prpf3	100	91.127	ENSSMAG00000015739	prpf3	100	91.127	Scophthalmus_maximus
ENSLBEG00000026310	prpf3	100	87.179	ENSSDUG00000006840	prpf3	92	96.739	Seriola_dumerili
ENSLBEG00000026310	prpf3	100	97.826	ENSSLDG00000015423	prpf3	100	92.827	Seriola_lalandi_dorsalis
ENSLBEG00000026310	prpf3	99	71.045	ENSSARG00000011064	PRPF3	100	70.126	Sorex_araneus
ENSLBEG00000026310	prpf3	99	71.130	ENSSPUG00000000809	PRPF3	100	69.806	Sphenodon_punctatus
ENSLBEG00000026310	prpf3	100	93.301	ENSSPAG00000018721	prpf3	100	93.142	Stegastes_partitus
ENSLBEG00000026310	prpf3	99	71.186	ENSSSCG00000030119	PRPF3	99	74.864	Sus_scrofa
ENSLBEG00000026310	prpf3	99	62.571	ENSTGUG00000004552	PRPF3	100	61.723	Taeniopygia_guttata
ENSLBEG00000026310	prpf3	100	83.333	ENSTRUG00000014923	prpf3	100	83.333	Takifugu_rubripes
ENSLBEG00000026310	prpf3	99	83.989	ENSTNIG00000008058	prpf3	100	83.708	Tetraodon_nigroviridis
ENSLBEG00000026310	prpf3	80	72.172	ENSTBEG00000014072	PRPF3	88	73.077	Tupaia_belangeri
ENSLBEG00000026310	prpf3	99	66.243	ENSTTRG00000010616	PRPF3	100	65.358	Tursiops_truncatus
ENSLBEG00000026310	prpf3	85	74.819	ENSUAMG00000009345	PRPF3	99	74.864	Ursus_americanus
ENSLBEG00000026310	prpf3	99	71.186	ENSUMAG00000003720	PRPF3	100	70.949	Ursus_maritimus
ENSLBEG00000026310	prpf3	88	77.149	ENSVPAG00000005425	PRPF3	89	76.697	Vicugna_pacos
ENSLBEG00000026310	prpf3	99	73.438	ENSVVUG00000007933	PRPF3	100	73.635	Vulpes_vulpes
ENSLBEG00000026310	prpf3	97	74.054	ENSXETG00000018654	prpf3	100	69.492	Xenopus_tropicalis
ENSLBEG00000026310	prpf3	100	89.440	ENSXMAG00000016347	prpf3	100	89.120	Xiphophorus_maculatus