EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026324 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: si:ch211-153b23.3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3670 bases
Position: chrFKLU01000293.1:324138-327807
Accession: ZDB-GENE-141216-408
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035039	Sua5_yciO_yrdC	PF01300.18	1.4e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036535	-	2622	-	ENSLBEP00000035039	873 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000026324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026324	si:ch211-153b23.3	56	31.094	ENSLBEG00000026309	si:ch211-153b23.4	59	31.094

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026324	si:ch211-153b23.3	56	31.166	ENSAPOG00000006178	si:ch211-153b23.4	60	31.166	Acanthochromis_polyacanthus
ENSLBEG00000026324	si:ch211-153b23.3	56	31.166	ENSAPOG00000006144	si:ch211-153b23.4	61	31.166	Acanthochromis_polyacanthus
ENSLBEG00000026324	si:ch211-153b23.3	99	75.517	ENSACIG00000006968	si:ch211-153b23.3	100	75.517	Amphilophus_citrinellus
ENSLBEG00000026324	si:ch211-153b23.3	56	31.931	ENSACIG00000006997	si:ch211-153b23.4	61	31.931	Amphilophus_citrinellus
ENSLBEG00000026324	si:ch211-153b23.3	99	83.977	ENSAOCG00000010974	si:ch211-153b23.3	100	83.977	Amphiprion_ocellaris
ENSLBEG00000026324	si:ch211-153b23.3	56	31.703	ENSAPEG00000014665	si:ch211-153b23.4	60	31.703	Amphiprion_percula
ENSLBEG00000026324	si:ch211-153b23.3	99	84.091	ENSAPEG00000014700	si:ch211-153b23.3	100	84.091	Amphiprion_percula
ENSLBEG00000026324	si:ch211-153b23.3	56	31.931	ENSATEG00000004948	si:ch211-153b23.4	59	31.931	Anabas_testudineus
ENSLBEG00000026324	si:ch211-153b23.3	99	81.448	ENSATEG00000004956	si:ch211-153b23.3	100	81.448	Anabas_testudineus
ENSLBEG00000026324	si:ch211-153b23.3	56	32.955	ENSACLG00000005471	si:ch211-153b23.4	59	32.955	Astatotilapia_calliptera
ENSLBEG00000026324	si:ch211-153b23.3	99	80.568	ENSACLG00000005894	si:ch211-153b23.3	100	80.568	Astatotilapia_calliptera
ENSLBEG00000026324	si:ch211-153b23.3	99	71.769	ENSAMXG00000038564	si:ch211-153b23.3	99	71.769	Astyanax_mexicanus
ENSLBEG00000026324	si:ch211-153b23.3	99	77.816	ENSCSEG00000014853	si:ch211-153b23.3	100	77.816	Cynoglossus_semilaevis
ENSLBEG00000026324	si:ch211-153b23.3	99	80.181	ENSCVAG00000021124	si:ch211-153b23.3	100	80.181	Cyprinodon_variegatus
ENSLBEG00000026324	si:ch211-153b23.3	56	32.129	ENSCVAG00000021145	si:ch211-153b23.4	64	32.129	Cyprinodon_variegatus
ENSLBEG00000026324	si:ch211-153b23.3	58	32.514	ENSDARG00000077169	si:ch211-153b23.4	59	32.514	Danio_rerio
ENSLBEG00000026324	si:ch211-153b23.3	100	70.805	ENSDARG00000104919	si:ch211-153b23.3	100	70.805	Danio_rerio
ENSLBEG00000026324	si:ch211-153b23.3	86	87.500	ENSELUG00000004912	si:ch211-153b23.3	100	87.500	Esox_lucius
ENSLBEG00000026324	si:ch211-153b23.3	100	81.222	ENSFHEG00000010030	si:ch211-153b23.3	100	81.222	Fundulus_heteroclitus
ENSLBEG00000026324	si:ch211-153b23.3	56	31.609	ENSFHEG00000010001	si:ch211-153b23.4	65	31.609	Fundulus_heteroclitus
ENSLBEG00000026324	si:ch211-153b23.3	100	79.594	ENSGAFG00000007455	si:ch211-153b23.3	100	79.594	Gambusia_affinis
ENSLBEG00000026324	si:ch211-153b23.3	53	32.277	ENSHBUG00000000013	si:ch211-153b23.4	66	32.277	Haplochromis_burtoni
ENSLBEG00000026324	si:ch211-153b23.3	99	80.682	ENSHBUG00000001760	si:ch211-153b23.3	100	80.682	Haplochromis_burtoni
ENSLBEG00000026324	si:ch211-153b23.3	100	70.588	ENSIPUG00000015213	si:ch211-153b23.3	100	70.588	Ictalurus_punctatus
ENSLBEG00000026324	si:ch211-153b23.3	57	31.528	ENSKMAG00000006829	si:ch211-153b23.4	62	31.528	Kryptolebias_marmoratus
ENSLBEG00000026324	si:ch211-153b23.3	100	80.135	ENSKMAG00000006792	si:ch211-153b23.3	100	80.135	Kryptolebias_marmoratus
ENSLBEG00000026324	si:ch211-153b23.3	57	31.660	ENSKMAG00000006919	-	58	31.660	Kryptolebias_marmoratus
ENSLBEG00000026324	si:ch211-153b23.3	94	57.261	ENSLACG00000005800	-	99	57.261	Latimeria_chalumnae
ENSLBEG00000026324	si:ch211-153b23.3	84	58.333	ENSLOCG00000015063	si:ch211-153b23.3	98	58.333	Lepisosteus_oculatus
ENSLBEG00000026324	si:ch211-153b23.3	99	81.839	ENSMAMG00000009328	si:ch211-153b23.3	100	81.839	Mastacembelus_armatus
ENSLBEG00000026324	si:ch211-153b23.3	56	32.375	ENSMAMG00000009358	si:ch211-153b23.4	63	32.375	Mastacembelus_armatus
ENSLBEG00000026324	si:ch211-153b23.3	56	32.634	ENSMAMG00000009277	si:ch211-153b23.4	62	32.634	Mastacembelus_armatus
ENSLBEG00000026324	si:ch211-153b23.3	56	32.765	ENSMZEG00005011433	si:ch211-153b23.4	63	32.765	Maylandia_zebra
ENSLBEG00000026324	si:ch211-153b23.3	99	80.795	ENSMZEG00005011450	si:ch211-153b23.3	100	80.795	Maylandia_zebra
ENSLBEG00000026324	si:ch211-153b23.3	99	82.993	ENSMMOG00000004436	si:ch211-153b23.3	100	82.993	Mola_mola
ENSLBEG00000026324	si:ch211-153b23.3	56	32.252	ENSMMOG00000004425	si:ch211-153b23.4	64	32.252	Mola_mola
ENSLBEG00000026324	si:ch211-153b23.3	99	80.682	ENSNBRG00000013370	si:ch211-153b23.3	100	80.682	Neolamprologus_brichardi
ENSLBEG00000026324	si:ch211-153b23.3	56	32.386	ENSNBRG00000013392	si:ch211-153b23.4	65	32.386	Neolamprologus_brichardi
ENSLBEG00000026324	si:ch211-153b23.3	56	32.765	ENSONIG00000017875	si:ch211-153b23.4	59	32.765	Oreochromis_niloticus
ENSLBEG00000026324	si:ch211-153b23.3	99	78.251	ENSORLG00000006161	si:ch211-153b23.3	99	78.251	Oryzias_latipes
ENSLBEG00000026324	si:ch211-153b23.3	56	31.992	ENSORLG00000006169	si:ch211-153b23.4	59	31.992	Oryzias_latipes
ENSLBEG00000026324	si:ch211-153b23.3	97	79.487	ENSORLG00020000910	si:ch211-153b23.3	100	79.487	Oryzias_latipes_hni
ENSLBEG00000026324	si:ch211-153b23.3	97	78.721	ENSORLG00015003698	si:ch211-153b23.3	100	78.721	Oryzias_latipes_hsok
ENSLBEG00000026324	si:ch211-153b23.3	56	32.375	ENSORLG00015003709	si:ch211-153b23.4	59	32.375	Oryzias_latipes_hsok
ENSLBEG00000026324	si:ch211-153b23.3	99	78.676	ENSOMEG00000007661	si:ch211-153b23.3	99	78.676	Oryzias_melastigma
ENSLBEG00000026324	si:ch211-153b23.3	56	31.609	ENSOMEG00000007682	si:ch211-153b23.4	59	31.609	Oryzias_melastigma
ENSLBEG00000026324	si:ch211-153b23.3	97	70.814	ENSPKIG00000022450	si:ch211-153b23.3	100	70.814	Paramormyrops_kingsleyae
ENSLBEG00000026324	si:ch211-153b23.3	57	32.171	ENSPKIG00000025681	si:ch211-153b23.4	59	32.171	Paramormyrops_kingsleyae
ENSLBEG00000026324	si:ch211-153b23.3	56	32.122	ENSPKIG00000014429	si:ch211-153b23.4	61	32.122	Paramormyrops_kingsleyae
ENSLBEG00000026324	si:ch211-153b23.3	99	50.939	ENSPKIG00000021029	-	99	51.050	Paramormyrops_kingsleyae
ENSLBEG00000026324	si:ch211-153b23.3	83	81.633	ENSPMGG00000001311	si:ch211-153b23.3	99	81.633	Periophthalmus_magnuspinnatus
ENSLBEG00000026324	si:ch211-153b23.3	100	79.978	ENSPFOG00000012289	si:ch211-153b23.3	100	79.978	Poecilia_formosa
ENSLBEG00000026324	si:ch211-153b23.3	99	80.839	ENSPLAG00000016320	si:ch211-153b23.3	100	80.839	Poecilia_latipinna
ENSLBEG00000026324	si:ch211-153b23.3	55	31.538	ENSPMEG00000007538	si:ch211-153b23.4	64	31.538	Poecilia_mexicana
ENSLBEG00000026324	si:ch211-153b23.3	100	80.834	ENSPMEG00000008884	si:ch211-153b23.3	100	80.834	Poecilia_mexicana
ENSLBEG00000026324	si:ch211-153b23.3	56	32.765	ENSPNYG00000000250	si:ch211-153b23.4	63	32.765	Pundamilia_nyererei
ENSLBEG00000026324	si:ch211-153b23.3	99	80.568	ENSPNYG00000000251	si:ch211-153b23.3	100	80.568	Pundamilia_nyererei
ENSLBEG00000026324	si:ch211-153b23.3	100	73.643	ENSPNAG00000019592	si:ch211-153b23.3	100	73.643	Pygocentrus_nattereri
ENSLBEG00000026324	si:ch211-153b23.3	56	32.314	ENSPNAG00000019554	si:ch211-153b23.4	59	32.184	Pygocentrus_nattereri
ENSLBEG00000026324	si:ch211-153b23.3	68	50.564	ENSSFOG00015009030	-	96	50.564	Scleropages_formosus
ENSLBEG00000026324	si:ch211-153b23.3	100	72.464	ENSSFOG00015010910	si:ch211-153b23.3	100	72.464	Scleropages_formosus
ENSLBEG00000026324	si:ch211-153b23.3	99	83.182	ENSSMAG00000005446	si:ch211-153b23.3	100	83.182	Scophthalmus_maximus
ENSLBEG00000026324	si:ch211-153b23.3	56	31.418	ENSSDUG00000006671	si:ch211-153b23.4	64	31.418	Seriola_dumerili
ENSLBEG00000026324	si:ch211-153b23.3	99	82.786	ENSSLDG00000008629	si:ch211-153b23.3	100	82.786	Seriola_lalandi_dorsalis
ENSLBEG00000026324	si:ch211-153b23.3	56	32.765	ENSTGUG00000005499	-	63	32.765	Taeniopygia_guttata
ENSLBEG00000026324	si:ch211-153b23.3	99	79.287	ENSTRUG00000020530	si:ch211-153b23.3	99	79.287	Takifugu_rubripes
ENSLBEG00000026324	si:ch211-153b23.3	93	82.528	ENSTNIG00000008962	si:ch211-153b23.3	99	82.528	Tetraodon_nigroviridis
ENSLBEG00000026324	si:ch211-153b23.3	100	80.248	ENSXMAG00000029318	si:ch211-153b23.3	100	80.248	Xiphophorus_maculatus
ENSLBEG00000026324	si:ch211-153b23.3	56	32.319	ENSXMAG00000009416	-	61	32.319	Xiphophorus_maculatus
ENSLBEG00000026324	si:ch211-153b23.3	56	32.122	ENSXMAG00000021388	si:ch211-153b23.4	62	32.122	Xiphophorus_maculatus