EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026373 (Gene tree)
Gene ID: 109985809
Gene Symbol: e4f1
Alias: zgc:114190
Full Name: E4F transcription factor 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6983 bases
Position: chrFKLU01000087.1:812364-819346
Accession: 109985809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035113	zf-C2H2	PF00096.26	1.2e-31	1	6
ENSLBEP00000035113	zf-C2H2	PF00096.26	1.2e-31	2	6
ENSLBEP00000035113	zf-C2H2	PF00096.26	1.2e-31	3	6
ENSLBEP00000035113	zf-C2H2	PF00096.26	1.2e-31	4	6
ENSLBEP00000035113	zf-C2H2	PF00096.26	1.2e-31	5	6
ENSLBEP00000035113	zf-C2H2	PF00096.26	1.2e-31	6	6
ENSLBEP00000035113	zf-met	PF12874.7	2.2e-07	1	1
ENSLBEP00000035113	zf-C2H2_jaz	PF12171.8	1.2e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036609	-	3603	XM_020636218	ENSLBEP00000035113	776 (aa)	XP_020491874	UPI0009B4179F

Gene Model

Click here to download ENSLBEG00000026373's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026373's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026373	e4f1	60	46.753	ENSLBEG00000005307	znf236	62	46.753
ENSLBEG00000026373	e4f1	67	40.449	ENSLBEG00000024737	-	98	43.243
ENSLBEG00000026373	e4f1	66	43.210	ENSLBEG00000002278	-	71	40.449
ENSLBEG00000026373	e4f1	70	38.333	ENSLBEG00000005715	-	79	38.356
ENSLBEG00000026373	e4f1	56	39.333	ENSLBEG00000008115	-	98	38.750
ENSLBEG00000026373	e4f1	71	38.922	ENSLBEG00000020747	-	93	38.182
ENSLBEG00000026373	e4f1	54	40.000	ENSLBEG00000028243	-	81	40.000
ENSLBEG00000026373	e4f1	71	43.373	ENSLBEG00000018509	-	89	43.373
ENSLBEG00000026373	e4f1	52	44.444	ENSLBEG00000000435	-	77	44.444
ENSLBEG00000026373	e4f1	55	36.310	ENSLBEG00000015694	-	91	36.527
ENSLBEG00000026373	e4f1	51	39.521	ENSLBEG00000022736	prdm5	69	39.521
ENSLBEG00000026373	e4f1	57	34.752	ENSLBEG00000011289	-	62	43.421
ENSLBEG00000026373	e4f1	70	39.474	ENSLBEG00000001132	-	79	42.857
ENSLBEG00000026373	e4f1	70	43.421	ENSLBEG00000002357	-	89	44.444
ENSLBEG00000026373	e4f1	63	41.667	ENSLBEG00000011091	si:cabz01071911.3	96	42.708
ENSLBEG00000026373	e4f1	61	36.943	ENSLBEG00000009580	-	69	46.053
ENSLBEG00000026373	e4f1	60	42.105	ENSLBEG00000007251	-	80	42.105
ENSLBEG00000026373	e4f1	61	40.789	ENSLBEG00000011465	-	96	40.789
ENSLBEG00000026373	e4f1	55	39.474	ENSLBEG00000010165	-	90	48.485
ENSLBEG00000026373	e4f1	73	43.373	ENSLBEG00000013570	-	99	45.455
ENSLBEG00000026373	e4f1	67	40.506	ENSLBEG00000010278	-	92	43.421
ENSLBEG00000026373	e4f1	59	45.652	ENSLBEG00000012438	ZNF319	93	37.423
ENSLBEG00000026373	e4f1	86	34.615	ENSLBEG00000016562	znf646	59	34.615
ENSLBEG00000026373	e4f1	66	36.905	ENSLBEG00000025689	-	75	46.053
ENSLBEG00000026373	e4f1	66	35.152	ENSLBEG00000008689	-	83	46.809
ENSLBEG00000026373	e4f1	56	38.667	ENSLBEG00000008439	znf319b	82	36.709
ENSLBEG00000026373	e4f1	66	35.398	ENSLBEG00000018970	-	83	42.105
ENSLBEG00000026373	e4f1	56	39.474	ENSLBEG00000008606	-	96	39.252
ENSLBEG00000026373	e4f1	61	37.589	ENSLBEG00000004805	-	93	40.789
ENSLBEG00000026373	e4f1	64	39.024	ENSLBEG00000024509	-	99	44.776

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026373	e4f1	100	72.640	ENSCSEG00000015852	e4f1	68	80.894	Cynoglossus_semilaevis
ENSLBEG00000026373	e4f1	100	74.131	ENSCVAG00000002788	e4f1	100	73.745	Cyprinodon_variegatus
ENSLBEG00000026373	e4f1	99	71.608	ENSFHEG00000022551	e4f1	97	71.053	Fundulus_heteroclitus
ENSLBEG00000026373	e4f1	82	64.163	ENSGMOG00000011409	e4f1	95	64.130	Gadus_morhua
ENSLBEG00000026373	e4f1	100	76.795	ENSGACG00000011808	e4f1	100	76.410	Gasterosteus_aculeatus
ENSLBEG00000026373	e4f1	100	69.809	ENSHCOG00000016455	e4f1	100	68.568	Hippocampus_comes
ENSLBEG00000026373	e4f1	100	53.316	ENSIPUG00000005379	e4f1	99	52.806	Ictalurus_punctatus
ENSLBEG00000026373	e4f1	100	72.599	ENSMMOG00000007612	e4f1	100	72.471	Mola_mola
ENSLBEG00000026373	e4f1	100	80.385	ENSMALG00000007314	e4f1	100	80.385	Monopterus_albus
ENSLBEG00000026373	e4f1	100	75.032	ENSORLG00000009160	e4f1	100	73.624	Oryzias_latipes
ENSLBEG00000026373	e4f1	100	72.581	ENSORLG00020017974	e4f1	100	71.216	Oryzias_latipes_hni
ENSLBEG00000026373	e4f1	100	75.738	ENSORLG00015007385	e4f1	100	74.583	Oryzias_latipes_hsok
ENSLBEG00000026373	e4f1	100	76.834	ENSOMEG00000012220	e4f1	100	76.190	Oryzias_melastigma
ENSLBEG00000026373	e4f1	100	57.503	ENSPKIG00000001942	e4f1	99	56.401	Paramormyrops_kingsleyae
ENSLBEG00000026373	e4f1	90	79.032	ENSPMGG00000020527	e4f1	100	81.356	Periophthalmus_magnuspinnatus
ENSLBEG00000026373	e4f1	99	52.949	ENSSFOG00015021291	e4f1	98	58.991	Scleropages_formosus
ENSLBEG00000026373	e4f1	100	82.564	ENSSMAG00000014720	e4f1	100	82.949	Scophthalmus_maximus
ENSLBEG00000026373	e4f1	97	48.711	ENSSPUG00000011420	E4F1	95	46.556	Sphenodon_punctatus
ENSLBEG00000026373	e4f1	100	73.149	ENSTRUG00000005176	e4f1	100	74.028	Takifugu_rubripes
ENSLBEG00000026373	e4f1	96	71.711	ENSTNIG00000018001	e4f1	100	71.579	Tetraodon_nigroviridis
ENSLBEG00000026373	e4f1	61	69.355	ENSXETG00000016091	e4f1	99	69.355	Xenopus_tropicalis