EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026419 (Gene tree)
Gene ID: 109990977
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 31674 bases
Position: chrFKLU01000195.1:61979-93652
Accession: 109990977
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035219	PARP	PF00644.20	7.5e-30	1	1
ENSLBEP00000035296	PARP	PF00644.20	1e-29	1	1
ENSLBEP00000035338	PARP	PF00644.20	1e-29	1	1
ENSLBEP00000035257	PARP	PF00644.20	1.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036869	-	6347	-	ENSLBEP00000035370	1840 (aa)	-	-
ENSLBET00000036793	-	9849	-	ENSLBEP00000035296	1938 (aa)	-	-
ENSLBET00000036836	-	9816	-	ENSLBEP00000035338	1927 (aa)	-	-
ENSLBET00000036715	-	4698	-	ENSLBEP00000035219	1565 (aa)	-	-
ENSLBET00000036753	-	9975	XM_020643268	ENSLBEP00000035257	1980 (aa)	XP_020498924	-

Gene Model

Click here to download ENSLBEG00000026419's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026419's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026419	-	92	35.513	ENSLBEG00000025830	si:ch211-219a4.3	99	41.041

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026419	-	94	59.679	ENSAPOG00000002274	-	98	64.912	Acanthochromis_polyacanthus
ENSLBEG00000026419	-	94	61.309	ENSAOCG00000020608	-	100	62.811	Amphiprion_ocellaris
ENSLBEG00000026419	-	58	49.294	ENSAMXG00000010091	-	99	52.507	Astyanax_mexicanus
ENSLBEG00000026419	-	91	33.571	ENSAMXG00000010209	-	99	33.835	Astyanax_mexicanus
ENSLBEG00000026419	-	99	58.031	ENSCVAG00000009352	-	99	64.511	Cyprinodon_variegatus
ENSLBEG00000026419	-	95	48.593	ENSDARG00000112454	FO744833.2	95	50.788	Danio_rerio
ENSLBEG00000026419	-	82	32.027	ENSELUG00000004826	-	88	30.651	Esox_lucius
ENSLBEG00000026419	-	99	51.226	ENSELUG00000013643	-	99	60.304	Esox_lucius
ENSLBEG00000026419	-	82	45.122	ENSIPUG00000019762	-	95	51.892	Ictalurus_punctatus
ENSLBEG00000026419	-	99	50.125	ENSIPUG00000019562	-	89	66.176	Ictalurus_punctatus
ENSLBEG00000026419	-	99	71.698	ENSKMAG00000010882	-	99	66.470	Kryptolebias_marmoratus
ENSLBEG00000026419	-	99	62.176	ENSMZEG00005002061	-	99	63.355	Maylandia_zebra
ENSLBEG00000026419	-	86	58.712	ENSMZEG00005027856	-	99	58.524	Maylandia_zebra
ENSLBEG00000026419	-	86	77.632	ENSMMOG00000010419	-	100	74.619	Mola_mola
ENSLBEG00000026419	-	99	77.358	ENSONIG00000000234	-	91	77.358	Oreochromis_niloticus
ENSLBEG00000026419	-	99	56.582	ENSORLG00000017386	-	99	60.921	Oryzias_latipes
ENSLBEG00000026419	-	99	68.000	ENSORLG00000017404	-	98	62.970	Oryzias_latipes
ENSLBEG00000026419	-	99	54.950	ENSORLG00015004157	-	99	67.323	Oryzias_latipes_hsok
ENSLBEG00000026419	-	99	55.806	ENSORLG00015004253	-	96	62.500	Oryzias_latipes_hsok
ENSLBEG00000026419	-	99	52.473	ENSOMEG00000009483	-	92	66.272	Oryzias_melastigma
ENSLBEG00000026419	-	83	32.540	ENSPKIG00000004064	-	85	48.235	Paramormyrops_kingsleyae
ENSLBEG00000026419	-	98	75.676	ENSPFOG00000015738	-	89	75.472	Poecilia_formosa
ENSLBEG00000026419	-	93	65.193	ENSPREG00000017145	-	98	67.041	Poecilia_reticulata
ENSLBEG00000026419	-	90	62.736	ENSPNYG00000006865	-	100	53.666	Pundamilia_nyererei
ENSLBEG00000026419	-	75	35.156	ENSPNAG00000005968	-	92	38.071	Pygocentrus_nattereri
ENSLBEG00000026419	-	82	32.317	ENSSFOG00015019732	-	85	39.594	Scleropages_formosus
ENSLBEG00000026419	-	99	50.000	ENSSFOG00015006999	-	98	50.060	Scleropages_formosus
ENSLBEG00000026419	-	99	64.005	ENSSMAG00000016922	-	100	70.202	Scophthalmus_maximus
ENSLBEG00000026419	-	52	70.561	ENSSDUG00000013560	-	98	70.561	Seriola_dumerili
ENSLBEG00000026419	-	99	59.404	ENSSPAG00000014708	-	92	71.429	Stegastes_partitus
ENSLBEG00000026419	-	96	54.100	ENSTRUG00000003423	-	95	54.502	Takifugu_rubripes
ENSLBEG00000026419	-	93	65.193	ENSXCOG00000012535	-	98	67.041	Xiphophorus_couchianus