EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026573 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 2155 bases
Position: chrFKLU01000087.1:883874-886028
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035406	zf-C2H2	PF00096.26	1.6e-16	1	3
ENSLBEP00000035406	zf-C2H2	PF00096.26	1.6e-16	2	3
ENSLBEP00000035406	zf-C2H2	PF00096.26	1.6e-16	3	3
ENSLBEP00000035406	zf-met	PF12874.7	0.00048	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000036906	-	687	-	ENSLBEP00000035406	228 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000026573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026573's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026573	-	64	34.167	ENSLBEG00000020747	-	87	34.167
ENSLBEG00000026573	-	59	33.043	ENSLBEG00000000369	-	80	33.043
ENSLBEG00000026573	-	75	43.056	ENSLBEG00000011349	-	75	43.056
ENSLBEG00000026573	-	61	35.897	ENSLBEG00000013235	-	70	35.897
ENSLBEG00000026573	-	73	43.662	ENSLBEG00000011465	-	97	43.662
ENSLBEG00000026573	-	88	31.304	ENSLBEG00000024509	-	95	36.842
ENSLBEG00000026573	-	79	35.593	ENSLBEG00000028271	-	90	35.593
ENSLBEG00000026573	-	64	46.296	ENSLBEG00000007937	-	64	46.296
ENSLBEG00000026573	-	50	35.455	ENSLBEG00000024458	-	59	35.455
ENSLBEG00000026573	-	55	34.615	ENSLBEG00000017424	-	91	34.615
ENSLBEG00000026573	-	58	33.077	ENSLBEG00000005729	znf652	72	38.667
ENSLBEG00000026573	-	69	43.137	ENSLBEG00000025139	-	83	43.137
ENSLBEG00000026573	-	61	38.571	ENSLBEG00000018509	-	88	38.571
ENSLBEG00000026573	-	54	45.455	ENSLBEG00000020128	-	97	43.860
ENSLBEG00000026573	-	86	33.913	ENSLBEG00000002278	-	69	33.913
ENSLBEG00000026573	-	75	33.898	ENSLBEG00000011289	-	66	33.898
ENSLBEG00000026573	-	52	33.898	ENSLBEG00000027993	-	56	35.870
ENSLBEG00000026573	-	55	33.071	ENSLBEG00000025305	-	82	33.071
ENSLBEG00000026573	-	77	42.593	ENSLBEG00000004867	-	86	32.812
ENSLBEG00000026573	-	64	32.704	ENSLBEG00000020461	-	57	32.704
ENSLBEG00000026573	-	54	37.600	ENSLBEG00000010132	-	82	32.683
ENSLBEG00000026573	-	66	38.393	ENSLBEG00000005715	-	74	38.393
ENSLBEG00000026573	-	62	40.000	ENSLBEG00000015264	-	62	40.000
ENSLBEG00000026573	-	71	30.233	ENSLBEG00000021260	-	58	30.233
ENSLBEG00000026573	-	78	62.703	ENSLBEG00000014676	-	65	62.703
ENSLBEG00000026573	-	56	38.636	ENSLBEG00000008850	-	51	38.636
ENSLBEG00000026573	-	72	31.098	ENSLBEG00000006161	-	54	32.787
ENSLBEG00000026573	-	76	42.593	ENSLBEG00000012201	-	72	42.593
ENSLBEG00000026573	-	73	35.606	ENSLBEG00000011145	si:cabz01071911.3	85	35.606
ENSLBEG00000026573	-	61	35.088	ENSLBEG00000008320	-	54	35.088
ENSLBEG00000026573	-	76	42.667	ENSLBEG00000014211	-	80	42.667
ENSLBEG00000026573	-	77	38.967	ENSLBEG00000026552	-	66	38.967
ENSLBEG00000026573	-	67	38.462	ENSLBEG00000022736	prdm5	53	38.462
ENSLBEG00000026573	-	79	37.079	ENSLBEG00000009580	-	74	37.079
ENSLBEG00000026573	-	74	46.154	ENSLBEG00000010165	-	87	43.077
ENSLBEG00000026573	-	88	36.719	ENSLBEG00000008689	-	83	43.038
ENSLBEG00000026573	-	77	35.345	ENSLBEG00000019067	zbtb47b	58	33.077
ENSLBEG00000026573	-	84	36.111	ENSLBEG00000015694	-	94	40.299
ENSLBEG00000026573	-	50	43.662	ENSLBEG00000006924	-	99	43.662
ENSLBEG00000026573	-	63	31.126	ENSLBEG00000024454	-	59	31.667
ENSLBEG00000026573	-	57	34.532	ENSLBEG00000007106	-	60	34.532
ENSLBEG00000026573	-	79	36.496	ENSLBEG00000007837	-	98	36.496
ENSLBEG00000026573	-	81	32.576	ENSLBEG00000025696	-	72	32.576
ENSLBEG00000026573	-	92	40.789	ENSLBEG00000013570	-	98	40.789
ENSLBEG00000026573	-	78	41.667	ENSLBEG00000004805	-	91	41.667
ENSLBEG00000026573	-	60	40.299	ENSLBEG00000028243	-	80	40.299
ENSLBEG00000026573	-	76	39.437	ENSLBEG00000000373	-	78	39.437
ENSLBEG00000026573	-	75	40.845	ENSLBEG00000024737	-	89	48.000
ENSLBEG00000026573	-	63	34.454	ENSLBEG00000014527	-	50	34.454
ENSLBEG00000026573	-	61	33.621	ENSLBEG00000008606	-	85	35.398
ENSLBEG00000026573	-	57	41.538	ENSLBEG00000011091	si:cabz01071911.3	90	41.538
ENSLBEG00000026573	-	50	51.613	ENSLBEG00000001920	-	86	51.613
ENSLBEG00000026573	-	57	44.286	ENSLBEG00000017450	-	73	44.286
ENSLBEG00000026573	-	58	39.655	ENSLBEG00000025689	-	65	39.655
ENSLBEG00000026573	-	73	37.273	ENSLBEG00000017726	-	87	37.273
ENSLBEG00000026573	-	64	38.710	ENSLBEG00000028628	znf1174	53	38.710
ENSLBEG00000026573	-	78	33.028	ENSLBEG00000002357	-	96	30.818
ENSLBEG00000026573	-	79	44.444	ENSLBEG00000010278	-	87	40.845
ENSLBEG00000026573	-	50	47.143	ENSLBEG00000012947	-	70	47.143
ENSLBEG00000026573	-	77	50.000	ENSLBEG00000007251	-	86	42.254

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026573	-	75	36.275	ENSACIG00000017166	-	80	37.255	Amphilophus_citrinellus
ENSLBEG00000026573	-	52	35.294	ENSAOCG00000018579	-	71	35.294	Amphiprion_ocellaris
ENSLBEG00000026573	-	60	39.062	ENSAPEG00000019755	-	76	39.062	Amphiprion_percula
ENSLBEG00000026573	-	75	31.092	ENSCING00000004861	zf(c2h2)-12	77	31.092	Ciona_intestinalis
ENSLBEG00000026573	-	69	40.506	ENSCSAVG00000009574	-	98	40.506	Ciona_savignyi
ENSLBEG00000026573	-	71	31.852	ENSCSAVG00000006729	-	74	31.852	Ciona_savignyi
ENSLBEG00000026573	-	66	33.582	ENSCSAVG00000005896	-	74	33.582	Ciona_savignyi
ENSLBEG00000026573	-	66	43.056	ENSCVAG00000002295	-	82	43.056	Cyprinodon_variegatus
ENSLBEG00000026573	-	51	31.731	FBgn0030012	CG18262	55	37.879	Drosophila_melanogaster
ENSLBEG00000026573	-	52	35.938	FBgn0040366	CG11398	52	35.938	Drosophila_melanogaster
ENSLBEG00000026573	-	62	50.000	ENSEBUG00000008392	-	68	50.000	Eptatretus_burgeri
ENSLBEG00000026573	-	61	47.143	ENSEBUG00000015522	-	64	47.143	Eptatretus_burgeri
ENSLBEG00000026573	-	76	42.254	ENSEBUG00000004841	-	79	42.254	Eptatretus_burgeri
ENSLBEG00000026573	-	63	43.750	ENSFHEG00000013644	-	71	43.284	Fundulus_heteroclitus
ENSLBEG00000026573	-	59	42.254	ENSFHEG00000003596	-	59	42.254	Fundulus_heteroclitus
ENSLBEG00000026573	-	63	37.097	ENSFHEG00000012990	-	85	37.097	Fundulus_heteroclitus
ENSLBEG00000026573	-	76	37.097	ENSFHEG00000020889	-	94	37.097	Fundulus_heteroclitus
ENSLBEG00000026573	-	79	37.333	ENSGACG00000018415	-	92	37.333	Gasterosteus_aculeatus
ENSLBEG00000026573	-	57	40.385	ENSHCOG00000017437	-	59	34.483	Hippocampus_comes
ENSLBEG00000026573	-	59	34.667	ENSIPUG00000013526	-	51	34.667	Ictalurus_punctatus
ENSLBEG00000026573	-	55	34.058	ENSKMAG00000007658	-	81	34.884	Kryptolebias_marmoratus
ENSLBEG00000026573	-	78	33.566	ENSKMAG00000012909	-	69	33.566	Kryptolebias_marmoratus
ENSLBEG00000026573	-	55	34.677	ENSONIG00000003224	-	79	34.677	Oreochromis_niloticus
ENSLBEG00000026573	-	62	34.815	ENSONIG00000016416	-	85	34.815	Oreochromis_niloticus
ENSLBEG00000026573	-	59	34.667	ENSONIG00000003471	-	81	34.667	Oreochromis_niloticus
ENSLBEG00000026573	-	63	39.815	ENSONIG00000007812	-	95	39.815	Oreochromis_niloticus
ENSLBEG00000026573	-	59	40.909	ENSORLG00015018254	-	86	40.909	Oryzias_latipes_hsok
ENSLBEG00000026573	-	75	34.783	ENSOMEG00000017673	-	79	34.783	Oryzias_melastigma
ENSLBEG00000026573	-	69	32.174	ENSPMGG00000000243	-	75	32.174	Periophthalmus_magnuspinnatus
ENSLBEG00000026573	-	56	36.364	ENSPMGG00000019842	-	63	36.364	Periophthalmus_magnuspinnatus
ENSLBEG00000026573	-	83	37.975	ENSPMGG00000000458	-	80	34.211	Periophthalmus_magnuspinnatus
ENSLBEG00000026573	-	76	39.130	ENSPMGG00000022524	-	93	35.345	Periophthalmus_magnuspinnatus
ENSLBEG00000026573	-	57	47.727	ENSPMAG00000007983	-	82	47.727	Petromyzon_marinus
ENSLBEG00000026573	-	87	36.567	ENSPFOG00000002879	-	98	36.567	Poecilia_formosa
ENSLBEG00000026573	-	59	33.333	ENSPFOG00000020691	-	74	33.333	Poecilia_formosa
ENSLBEG00000026573	-	82	39.726	ENSPLAG00000006174	-	76	39.726	Poecilia_latipinna
ENSLBEG00000026573	-	75	35.043	ENSPMEG00000019229	-	55	35.043	Poecilia_mexicana
ENSLBEG00000026573	-	81	38.261	ENSPMEG00000007503	-	67	38.261	Poecilia_mexicana
ENSLBEG00000026573	-	81	38.261	ENSPREG00000015352	-	66	38.261	Poecilia_reticulata
ENSLBEG00000026573	-	93	33.071	ENSSDUG00000000946	-	77	40.845	Seriola_dumerili
ENSLBEG00000026573	-	68	33.043	ENSSLDG00000000464	-	60	33.043	Seriola_lalandi_dorsalis
ENSLBEG00000026573	-	80	51.020	ENSSLDG00000002515	-	88	51.020	Seriola_lalandi_dorsalis
ENSLBEG00000026573	-	60	37.681	ENSSLDG00000015796	-	52	37.681	Seriola_lalandi_dorsalis
ENSLBEG00000026573	-	63	38.462	ENSTNIG00000008154	-	52	38.462	Tetraodon_nigroviridis
ENSLBEG00000026573	-	82	38.017	ENSXMAG00000022242	-	84	38.017	Xiphophorus_maculatus