EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026775 (Gene tree)
Gene ID: -
Gene Symbol: pde12
Alias: fc58c05|fi42f03|wu:fc58c05|wu:fi42f03|zgc:136374
Full Name: phosphodiesterase 12
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4852 bases
Position: chrFKLU01000035.1:2093432-2098283
Accession: 109981724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035711	Exo_endo_phos	PF03372.23	1.2e-15	1	1
ENSLBEP00000035720	Exo_endo_phos	PF03372.23	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037233	-	1344	-	ENSLBEP00000035720	447 (aa)	-	-
ENSLBET00000037222	-	1767	XM_020630640	ENSLBEP00000035711	588 (aa)	XP_020486296	-

Gene Model

Click here to download ENSLBEG00000026775's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026775's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026775	pde12	96	92.401	ENSLBEG00000009762	PDE12	96	92.401

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026775	pde12	97	56.126	ENSG00000174840	PDE12	94	57.659	Homo_sapiens
ENSLBEG00000026775	pde12	99	74.050	ENSAPOG00000018806	pde12	96	74.271	Acanthochromis_polyacanthus
ENSLBEG00000026775	pde12	94	56.250	ENSAMEG00000011802	PDE12	99	56.424	Ailuropoda_melanoleuca
ENSLBEG00000026775	pde12	100	72.637	ENSACIG00000014918	pde12	94	73.545	Amphilophus_citrinellus
ENSLBEG00000026775	pde12	99	74.667	ENSAOCG00000016376	pde12	96	75.087	Amphiprion_ocellaris
ENSLBEG00000026775	pde12	99	74.667	ENSAPEG00000000756	pde12	96	75.087	Amphiprion_percula
ENSLBEG00000026775	pde12	100	75.707	ENSATEG00000003072	pde12	99	76.339	Anabas_testudineus
ENSLBEG00000026775	pde12	94	51.652	ENSACAG00000003067	PDE12	95	51.820	Anolis_carolinensis
ENSLBEG00000026775	pde12	97	55.980	ENSANAG00000011815	PDE12	95	57.021	Aotus_nancymaae
ENSLBEG00000026775	pde12	100	73.211	ENSACLG00000010127	pde12	99	72.414	Astatotilapia_calliptera
ENSLBEG00000026775	pde12	96	62.139	ENSAMXG00000020765	pde12	97	62.245	Astyanax_mexicanus
ENSLBEG00000026775	pde12	94	56.627	ENSBTAG00000015563	PDE12	94	56.261	Bos_taurus
ENSLBEG00000026775	pde12	54	30.294	WBGene00011268	pde-12	51	30.294	Caenorhabditis_elegans
ENSLBEG00000026775	pde12	97	55.868	ENSCJAG00000019905	PDE12	95	57.119	Callithrix_jacchus
ENSLBEG00000026775	pde12	94	55.612	ENSCAFG00000007792	PDE12	94	56.068	Canis_familiaris
ENSLBEG00000026775	pde12	94	55.612	ENSCAFG00020006692	PDE12	94	56.068	Canis_lupus_dingo
ENSLBEG00000026775	pde12	94	56.410	ENSCHIG00000014202	PDE12	94	55.726	Capra_hircus
ENSLBEG00000026775	pde12	94	56.068	ENSTSYG00000025750	PDE12	94	56.454	Carlito_syrichta
ENSLBEG00000026775	pde12	94	57.143	ENSCPOG00000001620	PDE12	95	56.971	Cavia_porcellus
ENSLBEG00000026775	pde12	99	48.618	ENSCCAG00000031290	PDE12	94	65.789	Cebus_capucinus
ENSLBEG00000026775	pde12	94	57.487	ENSCATG00000044539	PDE12	94	57.240	Cercocebus_atys
ENSLBEG00000026775	pde12	94	55.862	ENSCLAG00000004864	PDE12	94	56.282	Chinchilla_lanigera
ENSLBEG00000026775	pde12	94	57.586	ENSCSAG00000012275	PDE12	94	57.586	Chlorocebus_sabaeus
ENSLBEG00000026775	pde12	87	65.940	ENSCHOG00000002188	-	83	65.761	Choloepus_hoffmanni
ENSLBEG00000026775	pde12	64	65.963	ENSCHOG00000012173	-	95	63.682	Choloepus_hoffmanni
ENSLBEG00000026775	pde12	94	55.420	ENSCPBG00000012353	PDE12	91	55.323	Chrysemys_picta_bellii
ENSLBEG00000026775	pde12	92	34.507	ENSCING00000006903	-	99	34.155	Ciona_intestinalis
ENSLBEG00000026775	pde12	94	57.659	ENSCANG00000038723	PDE12	94	57.659	Colobus_angolensis_palliatus
ENSLBEG00000026775	pde12	96	55.333	ENSCGRG00001021836	Pde12	95	56.261	Cricetulus_griseus_chok1gshd
ENSLBEG00000026775	pde12	96	55.351	ENSCGRG00000012319	Pde12	95	56.971	Cricetulus_griseus_crigri
ENSLBEG00000026775	pde12	94	71.150	ENSCSEG00000018538	pde12	100	71.150	Cynoglossus_semilaevis
ENSLBEG00000026775	pde12	100	61.628	ENSCVAG00000003624	pde12	96	61.724	Cyprinodon_variegatus
ENSLBEG00000026775	pde12	98	56.926	ENSDARG00000030964	pde12	93	58.511	Danio_rerio
ENSLBEG00000026775	pde12	98	54.207	ENSDNOG00000048413	PDE12	94	57.240	Dasypus_novemcinctus
ENSLBEG00000026775	pde12	94	56.604	ENSDORG00000004313	Pde12	94	56.971	Dipodomys_ordii
ENSLBEG00000026775	pde12	94	33.108	FBgn0051759	CG31759	77	36.726	Drosophila_melanogaster
ENSLBEG00000026775	pde12	71	43.976	ENSEBUG00000004803	pde12	72	43.976	Eptatretus_burgeri
ENSLBEG00000026775	pde12	94	56.678	ENSEASG00005000644	PDE12	95	56.923	Equus_asinus_asinus
ENSLBEG00000026775	pde12	94	56.849	ENSECAG00000005326	PDE12	95	57.094	Equus_caballus
ENSLBEG00000026775	pde12	56	62.428	ENSEEUG00000010406	-	54	62.069	Erinaceus_europaeus
ENSLBEG00000026775	pde12	99	61.194	ENSELUG00000014391	pde12	93	62.892	Esox_lucius
ENSLBEG00000026775	pde12	94	56.304	ENSFCAG00000031696	PDE12	94	56.485	Felis_catus
ENSLBEG00000026775	pde12	79	58.506	ENSFALG00000008401	PDE12	99	58.873	Ficedula_albicollis
ENSLBEG00000026775	pde12	96	56.240	ENSFDAG00000021278	PDE12	95	56.997	Fukomys_damarensis
ENSLBEG00000026775	pde12	97	67.184	ENSFHEG00000018967	pde12	87	71.587	Fundulus_heteroclitus
ENSLBEG00000026775	pde12	94	62.324	ENSGMOG00000018041	pde12	99	62.324	Gadus_morhua
ENSLBEG00000026775	pde12	94	55.712	ENSGALG00000052355	PDE12	96	56.239	Gallus_gallus
ENSLBEG00000026775	pde12	99	70.333	ENSGAFG00000002045	pde12	96	70.415	Gambusia_affinis
ENSLBEG00000026775	pde12	100	71.993	ENSGACG00000003914	pde12	96	73.565	Gasterosteus_aculeatus
ENSLBEG00000026775	pde12	98	54.077	ENSGAGG00000010266	PDE12	91	55.420	Gopherus_agassizii
ENSLBEG00000026775	pde12	97	56.126	ENSGGOG00000003312	PDE12	94	57.659	Gorilla_gorilla
ENSLBEG00000026775	pde12	100	73.378	ENSHBUG00000023370	pde12	95	74.431	Haplochromis_burtoni
ENSLBEG00000026775	pde12	96	55.574	ENSHGLG00000005661	PDE12	95	56.314	Heterocephalus_glaber_female
ENSLBEG00000026775	pde12	96	55.075	ENSHGLG00100001136	PDE12	95	55.973	Heterocephalus_glaber_male
ENSLBEG00000026775	pde12	100	66.776	ENSHCOG00000013749	pde12	96	67.462	Hippocampus_comes
ENSLBEG00000026775	pde12	99	58.124	ENSIPUG00000007123	Pde12	94	60.354	Ictalurus_punctatus
ENSLBEG00000026775	pde12	94	55.763	ENSSTOG00000007861	PDE12	95	55.877	Ictidomys_tridecemlineatus
ENSLBEG00000026775	pde12	94	56.581	ENSJJAG00000006038	Pde12	94	56.752	Jaculus_jaculus
ENSLBEG00000026775	pde12	99	73.000	ENSKMAG00000018523	pde12	96	73.852	Kryptolebias_marmoratus
ENSLBEG00000026775	pde12	94	60.816	ENSLACG00000015492	PDE12	94	60.816	Latimeria_chalumnae
ENSLBEG00000026775	pde12	94	61.170	ENSLOCG00000013277	pde12	93	61.062	Lepisosteus_oculatus
ENSLBEG00000026775	pde12	91	55.052	ENSLAFG00000002821	PDE12	100	56.239	Loxodonta_africana
ENSLBEG00000026775	pde12	94	57.659	ENSMFAG00000030966	PDE12	94	57.659	Macaca_fascicularis
ENSLBEG00000026775	pde12	94	57.659	ENSMMUG00000004052	PDE12	94	57.659	Macaca_mulatta
ENSLBEG00000026775	pde12	94	57.659	ENSMNEG00000030068	PDE12	94	57.659	Macaca_nemestrina
ENSLBEG00000026775	pde12	94	57.659	ENSMLEG00000036137	PDE12	94	57.659	Mandrillus_leucophaeus
ENSLBEG00000026775	pde12	100	76.040	ENSMAMG00000014415	pde12	96	76.511	Mastacembelus_armatus
ENSLBEG00000026775	pde12	97	69.795	ENSMZEG00005028202	-	99	70.928	Maylandia_zebra
ENSLBEG00000026775	pde12	100	73.211	ENSMZEG00005016132	pde12	99	72.069	Maylandia_zebra
ENSLBEG00000026775	pde12	54	65.938	ENSMGAG00000006449	PDE12	99	65.938	Meleagris_gallopavo
ENSLBEG00000026775	pde12	94	55.245	ENSMAUG00000000442	Pde12	95	54.974	Mesocricetus_auratus
ENSLBEG00000026775	pde12	94	56.110	ENSMICG00000005723	PDE12	94	56.110	Microcebus_murinus
ENSLBEG00000026775	pde12	94	56.894	ENSMOCG00000020734	Pde12	95	56.696	Microtus_ochrogaster
ENSLBEG00000026775	pde12	100	76.539	ENSMMOG00000013636	pde12	96	76.511	Mola_mola
ENSLBEG00000026775	pde12	97	53.367	ENSMODG00000000155	PDE12	96	53.886	Monodelphis_domestica
ENSLBEG00000026775	pde12	100	73.877	ENSMALG00000022647	pde12	96	75.302	Monopterus_albus
ENSLBEG00000026775	pde12	98	55.319	MGP_CAROLIEiJ_G0019032	Pde12	95	56.089	Mus_caroli
ENSLBEG00000026775	pde12	94	56.775	ENSMUSG00000043702	Pde12	95	56.775	Mus_musculus
ENSLBEG00000026775	pde12	94	56.947	MGP_PahariEiJ_G0030049	Pde12	95	55.897	Mus_pahari
ENSLBEG00000026775	pde12	94	56.604	MGP_SPRETEiJ_G0019916	Pde12	95	55.746	Mus_spretus
ENSLBEG00000026775	pde12	94	55.862	ENSMPUG00000016869	PDE12	94	55.594	Mustela_putorius_furo
ENSLBEG00000026775	pde12	94	56.529	ENSMLUG00000026487	PDE12	95	56.529	Myotis_lucifugus
ENSLBEG00000026775	pde12	94	56.870	ENSNGAG00000001228	Pde12	95	56.870	Nannospalax_galili
ENSLBEG00000026775	pde12	99	66.778	ENSNBRG00000015769	pde12	65	67.311	Neolamprologus_brichardi
ENSLBEG00000026775	pde12	97	56.126	ENSNLEG00000007269	-	94	57.659	Nomascus_leucogenys
ENSLBEG00000026775	pde12	94	56.814	ENSNLEG00000034833	-	94	56.429	Nomascus_leucogenys
ENSLBEG00000026775	pde12	93	54.610	ENSMEUG00000006786	PDE12	94	54.720	Notamacropus_eugenii
ENSLBEG00000026775	pde12	96	55.122	ENSOPRG00000015273	PDE12	99	55.285	Ochotona_princeps
ENSLBEG00000026775	pde12	93	57.069	ENSODEG00000006268	PDE12	94	57.290	Octodon_degus
ENSLBEG00000026775	pde12	94	74.468	ENSONIG00000004293	pde12	100	74.468	Oreochromis_niloticus
ENSLBEG00000026775	pde12	90	50.226	ENSOANG00000012885	PDE12	99	52.087	Ornithorhynchus_anatinus
ENSLBEG00000026775	pde12	93	58.031	ENSOCUG00000000823	PDE12	94	57.904	Oryctolagus_cuniculus
ENSLBEG00000026775	pde12	100	68.719	ENSORLG00000017444	pde12	96	69.948	Oryzias_latipes
ENSLBEG00000026775	pde12	100	68.220	ENSORLG00020010469	pde12	96	69.603	Oryzias_latipes_hni
ENSLBEG00000026775	pde12	100	68.719	ENSORLG00015004093	pde12	96	69.948	Oryzias_latipes_hsok
ENSLBEG00000026775	pde12	100	69.103	ENSOMEG00000020900	pde12	96	69.085	Oryzias_melastigma
ENSLBEG00000026775	pde12	94	56.282	ENSOGAG00000024093	PDE12	94	56.775	Otolemur_garnettii
ENSLBEG00000026775	pde12	90	55.914	ENSOARG00000013642	PDE12	100	55.080	Ovis_aries
ENSLBEG00000026775	pde12	97	55.960	ENSPPAG00000034712	PDE12	94	57.487	Pan_paniscus
ENSLBEG00000026775	pde12	94	56.131	ENSPPRG00000011738	PDE12	94	56.314	Panthera_pardus
ENSLBEG00000026775	pde12	85	54.857	ENSPTIG00000019166	PDE12	96	56.505	Panthera_tigris_altaica
ENSLBEG00000026775	pde12	97	55.629	ENSPTRG00000030221	PDE12	94	57.143	Pan_troglodytes
ENSLBEG00000026775	pde12	94	57.487	ENSPANG00000007324	PDE12	94	57.487	Papio_anubis
ENSLBEG00000026775	pde12	98	59.083	ENSPKIG00000025354	pde12	94	60.106	Paramormyrops_kingsleyae
ENSLBEG00000026775	pde12	98	54.257	ENSPSIG00000004926	PDE12	91	55.888	Pelodiscus_sinensis
ENSLBEG00000026775	pde12	100	62.458	ENSPMGG00000006742	pde12	97	64.956	Periophthalmus_magnuspinnatus
ENSLBEG00000026775	pde12	76	66.053	ENSPEMG00000007259	Pde12	94	53.131	Peromyscus_maniculatus_bairdii
ENSLBEG00000026775	pde12	99	72.185	ENSPFOG00000011864	pde12	96	72.680	Poecilia_formosa
ENSLBEG00000026775	pde12	74	77.397	ENSPLAG00000023871	pde12	80	77.397	Poecilia_latipinna
ENSLBEG00000026775	pde12	99	72.712	ENSPMEG00000005674	pde12	96	73.057	Poecilia_mexicana
ENSLBEG00000026775	pde12	99	72.213	ENSPREG00000022831	pde12	96	72.539	Poecilia_reticulata
ENSLBEG00000026775	pde12	97	56.219	ENSPPYG00000013769	PDE12	95	57.436	Pongo_abelii
ENSLBEG00000026775	pde12	94	55.938	ENSPCOG00000026004	PDE12	94	56.282	Propithecus_coquereli
ENSLBEG00000026775	pde12	94	56.250	ENSPVAG00000008885	PDE12	94	56.153	Pteropus_vampyrus
ENSLBEG00000026775	pde12	100	73.544	ENSPNYG00000013258	pde12	95	74.606	Pundamilia_nyererei
ENSLBEG00000026775	pde12	94	64.261	ENSPNAG00000029032	pde12	96	64.148	Pygocentrus_nattereri
ENSLBEG00000026775	pde12	94	57.118	ENSRNOG00000059442	Pde12	95	56.261	Rattus_norvegicus
ENSLBEG00000026775	pde12	94	57.831	ENSRBIG00000040704	PDE12	94	57.659	Rhinopithecus_bieti
ENSLBEG00000026775	pde12	94	57.831	ENSRROG00000031279	PDE12	94	57.659	Rhinopithecus_roxellana
ENSLBEG00000026775	pde12	93	57.639	ENSSBOG00000023974	PDE12	95	57.192	Saimiri_boliviensis_boliviensis
ENSLBEG00000026775	pde12	82	66.369	ENSSFOG00015003468	pde12	89	66.369	Scleropages_formosus
ENSLBEG00000026775	pde12	99	71.167	ENSSMAG00000003258	pde12	95	73.158	Scophthalmus_maximus
ENSLBEG00000026775	pde12	100	78.536	ENSSDUG00000020470	pde12	96	77.547	Seriola_dumerili
ENSLBEG00000026775	pde12	100	77.205	ENSSLDG00000019833	pde12	96	76.166	Seriola_lalandi_dorsalis
ENSLBEG00000026775	pde12	94	57.465	ENSSARG00000007201	PDE12	95	57.366	Sorex_araneus
ENSLBEG00000026775	pde12	97	74.232	ENSSPAG00000014980	pde12	96	74.048	Stegastes_partitus
ENSLBEG00000026775	pde12	54	57.500	ENSSSCG00000034476	-	74	57.500	Sus_scrofa
ENSLBEG00000026775	pde12	94	56.552	ENSSSCG00000011465	-	94	56.799	Sus_scrofa
ENSLBEG00000026775	pde12	63	64.690	ENSTGUG00000007290	PDE12	100	64.690	Taeniopygia_guttata
ENSLBEG00000026775	pde12	100	70.050	ENSTRUG00000005159	pde12	94	72.007	Takifugu_rubripes
ENSLBEG00000026775	pde12	99	69.783	ENSTNIG00000017497	pde12	94	71.403	Tetraodon_nigroviridis
ENSLBEG00000026775	pde12	69	66.124	ENSTBEG00000008202	PDE12	70	66.124	Tupaia_belangeri
ENSLBEG00000026775	pde12	94	56.207	ENSTTRG00000014707	PDE12	94	56.454	Tursiops_truncatus
ENSLBEG00000026775	pde12	94	56.034	ENSUAMG00000020634	-	94	56.110	Ursus_americanus
ENSLBEG00000026775	pde12	89	49.879	ENSUAMG00000008368	-	90	49.880	Ursus_americanus
ENSLBEG00000026775	pde12	74	60.731	ENSUMAG00000021906	PDE12	100	60.592	Ursus_maritimus
ENSLBEG00000026775	pde12	94	56.186	ENSVVUG00000020335	PDE12	92	56.261	Vulpes_vulpes
ENSLBEG00000026775	pde12	94	47.711	ENSXETG00000008653	pde12	98	47.711	Xenopus_tropicalis
ENSLBEG00000026775	pde12	97	72.260	ENSXCOG00000000407	pde12	97	73.274	Xiphophorus_couchianus
ENSLBEG00000026775	pde12	99	72.833	ENSXMAG00000013370	pde12	96	73.010	Xiphophorus_maculatus