EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000026779 (Gene tree)
Gene ID: 109986496
Gene Symbol: rab13
Alias: cb764|hm:zeh0455
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6932 bases
Position: chrFKLU01000098.1:529841-536772
Accession: 109986496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035702	MMR_HSR1	PF01926.23	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037213	-	3909	XM_020637168	ENSLBEP00000035702	200 (aa)	XP_020492824	UPI0009B49F11

Gene Model

Click here to download ENSLBEG00000026779's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026779's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000026779	rab13	81	37.037	ENSLBEG00000028450	kras	98	35.233
ENSLBEG00000026779	rab13	87	45.665	ENSLBEG00000016417	rab11al	80	45.665
ENSLBEG00000026779	rab13	84	35.882	ENSLBEG00000025705	si:ch73-116o1.2	81	35.882
ENSLBEG00000026779	rab13	85	45.349	ENSLBEG00000001313	RAB39B	81	45.349
ENSLBEG00000026779	rab13	86	53.801	ENSLBEG00000026989	RAB15	81	53.801
ENSLBEG00000026779	rab13	97	38.462	ENSLBEG00000026790	-	97	38.462
ENSLBEG00000026779	rab13	94	41.837	ENSLBEG00000014427	rab33a	88	41.837
ENSLBEG00000026779	rab13	63	31.783	ENSLBEG00000027205	-	69	31.783
ENSLBEG00000026779	rab13	82	41.071	ENSLBEG00000005128	-	75	41.071
ENSLBEG00000026779	rab13	90	44.324	ENSLBEG00000005861	rab18a	85	44.324
ENSLBEG00000026779	rab13	74	43.137	ENSLBEG00000018063	-	63	43.137
ENSLBEG00000026779	rab13	50	43.434	ENSLBEG00000003369	-	83	43.434
ENSLBEG00000026779	rab13	79	44.304	ENSLBEG00000019372	rab6bb	76	44.304
ENSLBEG00000026779	rab13	83	38.012	ENSLBEG00000018812	RAB29	86	39.157
ENSLBEG00000026779	rab13	86	37.143	ENSLBEG00000003132	rras	86	37.143
ENSLBEG00000026779	rab13	84	41.618	ENSLBEG00000026930	rab6ba	83	41.618
ENSLBEG00000026779	rab13	97	39.706	ENSLBEG00000005981	-	94	39.706
ENSLBEG00000026779	rab13	86	36.047	ENSLBEG00000001905	hrasb	90	36.047
ENSLBEG00000026779	rab13	85	44.767	ENSLBEG00000022630	-	81	44.767
ENSLBEG00000026779	rab13	84	42.690	ENSLBEG00000002926	si:dkey-34d22.5	77	42.690
ENSLBEG00000026779	rab13	82	34.524	ENSLBEG00000000119	rras2	94	33.503
ENSLBEG00000026779	rab13	94	35.602	ENSLBEG00000018180	si:dkey-13a21.4	94	35.602
ENSLBEG00000026779	rab13	85	38.857	ENSLBEG00000011478	rab9b	80	38.857
ENSLBEG00000026779	rab13	86	45.930	ENSLBEG00000003101	rab4a	81	45.930
ENSLBEG00000026779	rab13	87	46.243	ENSLBEG00000006087	rab11ba	80	46.243
ENSLBEG00000026779	rab13	79	44.304	ENSLBEG00000003748	rab6a	76	44.304
ENSLBEG00000026779	rab13	84	44.311	ENSLBEG00000019435	rab14	78	44.311
ENSLBEG00000026779	rab13	85	36.782	ENSLBEG00000027691	RAB17	75	36.782
ENSLBEG00000026779	rab13	77	35.714	ENSLBEG00000014885	rheb	83	35.714
ENSLBEG00000026779	rab13	88	54.857	ENSLBEG00000013463	rab15	82	54.857
ENSLBEG00000026779	rab13	68	31.387	ENSLBEG00000016494	arl2	71	31.387
ENSLBEG00000026779	rab13	86	50.581	ENSLBEG00000013756	rab12	71	50.581
ENSLBEG00000026779	rab13	86	47.368	ENSLBEG00000001146	rab30	84	47.368
ENSLBEG00000026779	rab13	83	38.012	ENSLBEG00000006152	-	83	38.012
ENSLBEG00000026779	rab13	78	32.692	ENSLBEG00000003644	rabl2	68	32.692
ENSLBEG00000026779	rab13	85	48.235	ENSLBEG00000007681	si:dkey-16l2.16	87	46.154
ENSLBEG00000026779	rab13	100	51.244	ENSLBEG00000005791	-	94	51.244
ENSLBEG00000026779	rab13	87	47.399	ENSLBEG00000015248	rab11bb	79	47.399
ENSLBEG00000026779	rab13	84	42.604	ENSLBEG00000001193	rab42a	78	42.604
ENSLBEG00000026779	rab13	84	46.429	ENSLBEG00000020796	rab2a	83	47.134
ENSLBEG00000026779	rab13	87	43.678	ENSLBEG00000016446	rab25b	84	43.678
ENSLBEG00000026779	rab13	88	36.872	ENSLBEG00000017798	-	86	36.872
ENSLBEG00000026779	rab13	91	55.801	ENSLBEG00000028426	RAB1A	89	55.801
ENSLBEG00000026779	rab13	87	32.584	ENSLBEG00000027628	si:cabz01085950.1	87	32.584
ENSLBEG00000026779	rab13	75	30.719	ENSLBEG00000017331	-	83	30.719
ENSLBEG00000026779	rab13	98	53.000	ENSLBEG00000027781	rab1ab	98	53.000
ENSLBEG00000026779	rab13	82	46.341	ENSLBEG00000019428	rab18b	80	46.341
ENSLBEG00000026779	rab13	80	42.683	ENSLBEG00000025798	zgc:101559	70	42.683
ENSLBEG00000026779	rab13	93	43.316	ENSLBEG00000027539	-	86	43.316
ENSLBEG00000026779	rab13	82	38.095	ENSLBEG00000020582	rab9a	83	38.095
ENSLBEG00000026779	rab13	95	39.062	ENSLBEG00000002516	rab5aa	85	39.062
ENSLBEG00000026779	rab13	79	39.241	ENSLBEG00000027819	rab34b	65	41.985
ENSLBEG00000026779	rab13	91	31.319	ENSLBEG00000019137	rhebl1	93	31.319
ENSLBEG00000026779	rab13	81	32.948	ENSLBEG00000016218	rasl11a	66	32.948
ENSLBEG00000026779	rab13	94	38.860	ENSLBEG00000026777	rab33ba	83	38.860
ENSLBEG00000026779	rab13	88	35.028	ENSLBEG00000013176	rab23	90	34.921
ENSLBEG00000026779	rab13	91	54.696	ENSLBEG00000021040	rab1ba	89	54.696
ENSLBEG00000026779	rab13	88	36.872	ENSLBEG00000001796	RAB7A	86	36.872
ENSLBEG00000026779	rab13	95	37.629	ENSLBEG00000003235	rab22a	97	37.629
ENSLBEG00000026779	rab13	81	42.236	ENSLBEG00000010408	-	88	38.342
ENSLBEG00000026779	rab13	98	51.531	ENSLBEG00000027226	-	80	51.596
ENSLBEG00000026779	rab13	97	42.157	ENSLBEG00000004172	-	94	42.157
ENSLBEG00000026779	rab13	86	51.462	ENSLBEG00000001618	rab35b	100	46.040
ENSLBEG00000026779	rab13	79	43.671	ENSLBEG00000008746	RAB41	75	43.671
ENSLBEG00000026779	rab13	93	45.161	ENSLBEG00000026857	rab11a	87	45.161
ENSLBEG00000026779	rab13	80	44.375	ENSLBEG00000002367	rab25a	75	44.375
ENSLBEG00000026779	rab13	83	37.791	ENSLBEG00000005018	rab32b	81	37.791
ENSLBEG00000026779	rab13	79	40.625	ENSLBEG00000026006	rab34a	60	40.625
ENSLBEG00000026779	rab13	81	41.615	ENSLBEG00000004128	rab5c	80	40.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026779	rab13	99	77.000	ENSG00000143545	RAB13	99	77.000	Homo_sapiens
ENSLBEG00000026779	rab13	91	93.407	ENSACIG00000008584	rab13	88	93.407	Amphilophus_citrinellus
ENSLBEG00000026779	rab13	99	77.723	ENSANAG00000030247	-	99	77.723	Aotus_nancymaae
ENSLBEG00000026779	rab13	100	92.079	ENSAMXG00000030712	rab13	100	92.079	Astyanax_mexicanus
ENSLBEG00000026779	rab13	99	75.980	ENSBTAG00000017604	RAB13	99	75.980	Bos_taurus
ENSLBEG00000026779	rab13	81	46.914	WBGene00019317	K02E10.1	74	46.914	Caenorhabditis_elegans
ENSLBEG00000026779	rab13	90	81.283	ENSCJAG00000009933	-	99	76.471	Callithrix_jacchus
ENSLBEG00000026779	rab13	99	75.980	ENSCHIG00000022271	-	99	75.980	Capra_hircus
ENSLBEG00000026779	rab13	99	76.500	ENSCPOG00000011491	-	99	76.500	Cavia_porcellus
ENSLBEG00000026779	rab13	99	77.000	ENSCCAG00000028502	-	99	77.000	Cebus_capucinus
ENSLBEG00000026779	rab13	99	77.000	ENSCATG00000041779	-	99	77.000	Cercocebus_atys
ENSLBEG00000026779	rab13	99	76.000	ENSCLAG00000006603	-	99	76.000	Chinchilla_lanigera
ENSLBEG00000026779	rab13	99	77.000	ENSCANG00000036573	-	99	77.000	Colobus_angolensis_palliatus
ENSLBEG00000026779	rab13	99	77.228	ENSCGRG00001021505	Rab13	99	77.228	Cricetulus_griseus_chok1gshd
ENSLBEG00000026779	rab13	99	77.228	ENSCGRG00000012126	Rab13	99	77.228	Cricetulus_griseus_crigri
ENSLBEG00000026779	rab13	100	93.500	ENSCSEG00000002358	rab13	100	93.500	Cynoglossus_semilaevis
ENSLBEG00000026779	rab13	100	92.500	ENSDARG00000034771	rab13	100	92.500	Danio_rerio
ENSLBEG00000026779	rab13	99	77.941	ENSDORG00000001591	Rab13	99	77.941	Dipodomys_ordii
ENSLBEG00000026779	rab13	99	77.000	ENSEASG00005000683	-	99	77.000	Equus_asinus_asinus
ENSLBEG00000026779	rab13	99	77.000	ENSECAG00000016551	RAB13	99	77.000	Equus_caballus
ENSLBEG00000026779	rab13	100	71.921	ENSEEUG00000001233	-	100	71.921	Erinaceus_europaeus
ENSLBEG00000026779	rab13	100	92.000	ENSELUG00000012801	rab13	100	92.000	Esox_lucius
ENSLBEG00000026779	rab13	99	75.500	ENSFCAG00000045269	-	99	75.500	Felis_catus
ENSLBEG00000026779	rab13	66	87.786	ENSFDAG00000014469	-	99	87.786	Fukomys_damarensis
ENSLBEG00000026779	rab13	100	92.000	ENSFHEG00000021221	rab13	97	95.480	Fundulus_heteroclitus
ENSLBEG00000026779	rab13	100	94.500	ENSGACG00000011925	rab13	99	94.500	Gasterosteus_aculeatus
ENSLBEG00000026779	rab13	91	81.421	ENSGAGG00000000742	-	100	76.733	Gopherus_agassizii
ENSLBEG00000026779	rab13	99	77.000	ENSGGOG00000023693	RAB13	99	77.000	Gorilla_gorilla
ENSLBEG00000026779	rab13	99	75.879	ENSHGLG00000008749	RAB13	99	75.879	Heterocephalus_glaber_female
ENSLBEG00000026779	rab13	99	75.879	ENSHGLG00100013608	RAB13	99	75.879	Heterocephalus_glaber_male
ENSLBEG00000026779	rab13	100	89.000	ENSHCOG00000007440	rab13	97	96.610	Hippocampus_comes
ENSLBEG00000026779	rab13	100	90.050	ENSIPUG00000003199	rab13	100	90.050	Ictalurus_punctatus
ENSLBEG00000026779	rab13	99	77.451	ENSSTOG00000011222	-	99	77.451	Ictidomys_tridecemlineatus
ENSLBEG00000026779	rab13	99	77.000	ENSJJAG00000010575	Rab13	99	77.000	Jaculus_jaculus
ENSLBEG00000026779	rab13	100	89.500	ENSKMAG00000001908	rab13	100	89.500	Kryptolebias_marmoratus
ENSLBEG00000026779	rab13	89	76.271	ENSLACG00000008103	-	99	76.271	Latimeria_chalumnae
ENSLBEG00000026779	rab13	99	77.000	ENSMFAG00000041018	RAB13	99	77.000	Macaca_fascicularis
ENSLBEG00000026779	rab13	99	77.000	ENSMNEG00000028951	-	99	77.000	Macaca_nemestrina
ENSLBEG00000026779	rab13	99	77.000	ENSMLEG00000042247	-	99	77.000	Mandrillus_leucophaeus
ENSLBEG00000026779	rab13	100	94.500	ENSMAMG00000014602	rab13	100	94.500	Mastacembelus_armatus
ENSLBEG00000026779	rab13	99	76.500	ENSMAUG00000015713	Rab13	99	76.500	Mesocricetus_auratus
ENSLBEG00000026779	rab13	99	77.387	ENSMICG00000010340	-	99	77.387	Microcebus_murinus
ENSLBEG00000026779	rab13	99	78.000	ENSMOCG00000021448	Rab13	99	78.000	Microtus_ochrogaster
ENSLBEG00000026779	rab13	99	77.833	ENSMODG00000017295	-	84	77.833	Monodelphis_domestica
ENSLBEG00000026779	rab13	99	74.510	MGP_CAROLIEiJ_G0025227	Rab13	99	74.510	Mus_caroli
ENSLBEG00000026779	rab13	99	74.757	ENSMUSG00000027935	Rab13	99	74.757	Mus_musculus
ENSLBEG00000026779	rab13	100	74.146	MGP_PahariEiJ_G0026671	Rab13	100	74.146	Mus_pahari
ENSLBEG00000026779	rab13	99	76.238	ENSNGAG00000010309	Rab13	99	76.238	Nannospalax_galili
ENSLBEG00000026779	rab13	100	93.500	ENSNBRG00000004124	rab13	100	93.500	Neolamprologus_brichardi
ENSLBEG00000026779	rab13	99	77.000	ENSNLEG00000028944	-	99	77.000	Nomascus_leucogenys
ENSLBEG00000026779	rab13	99	78.500	ENSMEUG00000009667	-	99	78.500	Notamacropus_eugenii
ENSLBEG00000026779	rab13	64	87.402	ENSODEG00000012634	-	100	87.402	Octodon_degus
ENSLBEG00000026779	rab13	99	76.000	ENSODEG00000010443	-	99	76.000	Octodon_degus
ENSLBEG00000026779	rab13	100	89.109	ENSONIG00000006340	rab13	100	89.109	Oreochromis_niloticus
ENSLBEG00000026779	rab13	87	84.971	ENSOCUG00000006286	-	97	84.971	Oryctolagus_cuniculus
ENSLBEG00000026779	rab13	100	94.000	ENSOMEG00000008210	rab13	100	94.000	Oryzias_melastigma
ENSLBEG00000026779	rab13	99	75.758	ENSOGAG00000016969	-	99	75.758	Otolemur_garnettii
ENSLBEG00000026779	rab13	99	77.000	ENSPPAG00000028435	-	99	77.000	Pan_paniscus
ENSLBEG00000026779	rab13	99	75.500	ENSPPRG00000008865	-	99	75.500	Panthera_pardus
ENSLBEG00000026779	rab13	99	77.000	ENSPTRG00000001370	RAB13	99	77.000	Pan_troglodytes
ENSLBEG00000026779	rab13	99	77.000	ENSPANG00000004479	-	99	77.000	Papio_anubis
ENSLBEG00000026779	rab13	100	93.500	ENSPMGG00000007680	rab13	100	93.500	Periophthalmus_magnuspinnatus
ENSLBEG00000026779	rab13	63	78.030	ENSPEMG00000017353	-	99	78.030	Peromyscus_maniculatus_bairdii
ENSLBEG00000026779	rab13	99	78.500	ENSPCIG00000029350	-	99	78.500	Phascolarctos_cinereus
ENSLBEG00000026779	rab13	89	96.045	ENSPLAG00000005832	RAB13	95	96.045	Poecilia_latipinna
ENSLBEG00000026779	rab13	100	93.500	ENSPREG00000017567	rab13	100	93.500	Poecilia_reticulata
ENSLBEG00000026779	rab13	99	77.000	ENSPPYG00000000790	-	99	77.000	Pongo_abelii
ENSLBEG00000026779	rab13	99	77.889	ENSPCOG00000012189	-	99	77.889	Propithecus_coquereli
ENSLBEG00000026779	rab13	99	76.884	ENSPVAG00000011095	-	99	76.884	Pteropus_vampyrus
ENSLBEG00000026779	rab13	89	96.045	ENSPNAG00000004189	rab13	94	96.045	Pygocentrus_nattereri
ENSLBEG00000026779	rab13	99	75.248	ENSRNOG00000016733	Rab13	99	75.248	Rattus_norvegicus
ENSLBEG00000026779	rab13	99	77.000	ENSRBIG00000008552	-	99	77.000	Rhinopithecus_bieti
ENSLBEG00000026779	rab13	99	77.000	ENSRROG00000036885	-	99	77.000	Rhinopithecus_roxellana
ENSLBEG00000026779	rab13	99	77.387	ENSSBOG00000020342	-	99	77.387	Saimiri_boliviensis_boliviensis
ENSLBEG00000026779	rab13	99	79.500	ENSSHAG00000011866	-	99	79.500	Sarcophilus_harrisii
ENSLBEG00000026779	rab13	99	76.471	ENSSSCG00000006564	-	99	76.471	Sus_scrofa
ENSLBEG00000026779	rab13	100	95.500	ENSTRUG00000024177	rab13	100	95.500	Takifugu_rubripes
ENSLBEG00000026779	rab13	99	78.000	ENSTBEG00000012734	-	99	78.000	Tupaia_belangeri
ENSLBEG00000026779	rab13	99	76.471	ENSTTRG00000011183	-	99	76.471	Tursiops_truncatus
ENSLBEG00000026779	rab13	69	81.159	ENSXETG00000020729	rab13	100	73.750	Xenopus_tropicalis
ENSLBEG00000026779	rab13	89	94.915	ENSXCOG00000019533	rab13	95	94.915	Xiphophorus_couchianus