EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000026818 (Gene tree)
Gene ID: 109984525
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4297 bases
Position: chrFKLU01000072.1:1434365-1438661
Accession: 109984525
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035763	RRM_1	PF00076.22	3.4e-39	1	2
ENSLBEP00000035763	RRM_1	PF00076.22	3.4e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037276	-	1914	XM_020634716	ENSLBEP00000035763	399 (aa)	XP_020490372	UPI0009B38A9C

Gene Model

Click here to download ENSLBEG00000026818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026818's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026818	sf3b4	57	98.246	ENSG00000143368	SF3B4	99	97.354	Homo_sapiens
ENSLBEG00000026818	sf3b4	58	99.130	ENSAPOG00000017647	sf3b4	58	98.712	Acanthochromis_polyacanthus
ENSLBEG00000026818	sf3b4	57	98.246	ENSAMEG00000010073	SF3B4	55	97.425	Ailuropoda_melanoleuca
ENSLBEG00000026818	sf3b4	58	97.403	ENSACIG00000018455	sf3b4	69	96.996	Amphilophus_citrinellus
ENSLBEG00000026818	sf3b4	57	100.000	ENSAOCG00000019801	sf3b4	58	98.712	Amphiprion_ocellaris
ENSLBEG00000026818	sf3b4	57	100.000	ENSAPEG00000010365	sf3b4	58	98.712	Amphiprion_percula
ENSLBEG00000026818	sf3b4	58	99.130	ENSATEG00000012844	sf3b4	58	98.283	Anabas_testudineus
ENSLBEG00000026818	sf3b4	54	100.000	ENSACAG00000010019	SF3B4	56	97.854	Anolis_carolinensis
ENSLBEG00000026818	sf3b4	57	98.246	ENSANAG00000031025	SF3B4	55	97.425	Aotus_nancymaae
ENSLBEG00000026818	sf3b4	59	97.468	ENSACLG00000014260	sf3b4	58	98.276	Astatotilapia_calliptera
ENSLBEG00000026818	sf3b4	58	98.261	ENSAMXG00000008282	sf3b4	58	96.996	Astyanax_mexicanus
ENSLBEG00000026818	sf3b4	51	96.535	ENSBTAG00000012793	-	51	95.652	Bos_taurus
ENSLBEG00000026818	sf3b4	57	98.246	ENSBTAG00000012495	SF3B4	55	97.425	Bos_taurus
ENSLBEG00000026818	sf3b4	57	98.246	ENSCAFG00000011617	SF3B4	55	97.425	Canis_familiaris
ENSLBEG00000026818	sf3b4	57	98.246	ENSCAFG00020019775	SF3B4	55	97.425	Canis_lupus_dingo
ENSLBEG00000026818	sf3b4	57	98.246	ENSCHIG00000025663	-	55	97.425	Capra_hircus
ENSLBEG00000026818	sf3b4	57	98.246	ENSTSYG00000009295	SF3B4	55	97.425	Carlito_syrichta
ENSLBEG00000026818	sf3b4	59	94.624	ENSCAPG00000006451	SF3B4	50	96.629	Cavia_aperea
ENSLBEG00000026818	sf3b4	57	98.246	ENSCPOG00000008267	SF3B4	55	97.425	Cavia_porcellus
ENSLBEG00000026818	sf3b4	57	97.368	ENSCCAG00000021751	-	52	96.983	Cebus_capucinus
ENSLBEG00000026818	sf3b4	57	98.246	ENSCATG00000033114	SF3B4	55	97.425	Cercocebus_atys
ENSLBEG00000026818	sf3b4	57	98.246	ENSCLAG00000015851	SF3B4	55	97.425	Chinchilla_lanigera
ENSLBEG00000026818	sf3b4	57	98.246	ENSCSAG00000018129	SF3B4	55	97.425	Chlorocebus_sabaeus
ENSLBEG00000026818	sf3b4	54	100.000	ENSCPBG00000008041	SF3B4	56	97.845	Chrysemys_picta_bellii
ENSLBEG00000026818	sf3b4	57	87.665	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSLBEG00000026818	sf3b4	52	91.429	ENSCSAVG00000007809	-	88	89.697	Ciona_savignyi
ENSLBEG00000026818	sf3b4	57	98.246	ENSCANG00000035579	SF3B4	55	97.425	Colobus_angolensis_palliatus
ENSLBEG00000026818	sf3b4	57	98.246	ENSCGRG00001003590	Sf3b4	55	97.425	Cricetulus_griseus_chok1gshd
ENSLBEG00000026818	sf3b4	57	98.246	ENSCGRG00000016914	Sf3b4	55	97.425	Cricetulus_griseus_crigri
ENSLBEG00000026818	sf3b4	66	93.985	ENSCVAG00000005536	sf3b4	60	95.279	Cyprinodon_variegatus
ENSLBEG00000026818	sf3b4	58	98.696	ENSDARG00000018574	sf3b4	58	97.854	Danio_rerio
ENSLBEG00000026818	sf3b4	55	92.727	ENSDNOG00000048908	-	52	94.064	Dasypus_novemcinctus
ENSLBEG00000026818	sf3b4	97	65.239	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSLBEG00000026818	sf3b4	57	98.246	ENSDORG00000016366	Sf3b4	55	97.425	Dipodomys_ordii
ENSLBEG00000026818	sf3b4	57	88.158	ENSETEG00000008963	SF3B4	55	87.554	Echinops_telfairi
ENSLBEG00000026818	sf3b4	57	98.246	ENSEASG00005001477	SF3B4	55	97.425	Equus_asinus_asinus
ENSLBEG00000026818	sf3b4	57	98.246	ENSECAG00000024737	SF3B4	55	97.425	Equus_caballus
ENSLBEG00000026818	sf3b4	87	84.571	ENSELUG00000012876	sf3b4	58	99.142	Esox_lucius
ENSLBEG00000026818	sf3b4	57	98.246	ENSFCAG00000010106	SF3B4	55	97.425	Felis_catus
ENSLBEG00000026818	sf3b4	57	98.246	ENSFDAG00000009286	SF3B4	55	97.425	Fukomys_damarensis
ENSLBEG00000026818	sf3b4	58	97.826	ENSGMOG00000002519	sf3b4	68	96.996	Gadus_morhua
ENSLBEG00000026818	sf3b4	54	100.000	ENSGALG00000013352	SF3B4	56	98.283	Gallus_gallus
ENSLBEG00000026818	sf3b4	66	93.985	ENSGAFG00000010181	sf3b4	59	98.283	Gambusia_affinis
ENSLBEG00000026818	sf3b4	100	91.228	ENSGACG00000003819	sf3b4	61	99.163	Gasterosteus_aculeatus
ENSLBEG00000026818	sf3b4	76	70.455	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSLBEG00000026818	sf3b4	57	98.246	ENSGGOG00000004761	SF3B4	55	97.425	Gorilla_gorilla
ENSLBEG00000026818	sf3b4	59	97.468	ENSHBUG00000002028	sf3b4	58	98.276	Haplochromis_burtoni
ENSLBEG00000026818	sf3b4	57	98.246	ENSHGLG00000012360	SF3B4	55	97.425	Heterocephalus_glaber_female
ENSLBEG00000026818	sf3b4	57	98.246	ENSHGLG00100008533	SF3B4	55	97.425	Heterocephalus_glaber_male
ENSLBEG00000026818	sf3b4	99	82.836	ENSHCOG00000003014	sf3b4	58	96.137	Hippocampus_comes
ENSLBEG00000026818	sf3b4	58	99.130	ENSIPUG00000012242	Sf3b4	58	98.283	Ictalurus_punctatus
ENSLBEG00000026818	sf3b4	57	98.246	ENSSTOG00000000684	-	55	97.425	Ictidomys_tridecemlineatus
ENSLBEG00000026818	sf3b4	56	71.324	ENSJJAG00000022500	Sf3b4	56	71.429	Jaculus_jaculus
ENSLBEG00000026818	sf3b4	59	97.468	ENSKMAG00000008154	sf3b4	59	98.283	Kryptolebias_marmoratus
ENSLBEG00000026818	sf3b4	57	97.368	ENSLACG00000004436	SF3B4	64	95.708	Latimeria_chalumnae
ENSLBEG00000026818	sf3b4	58	99.138	ENSLOCG00000009048	sf3b4	55	99.138	Lepisosteus_oculatus
ENSLBEG00000026818	sf3b4	57	98.246	ENSLAFG00000008531	SF3B4	55	97.425	Loxodonta_africana
ENSLBEG00000026818	sf3b4	89	62.674	ENSMFAG00000039067	-	59	79.452	Macaca_fascicularis
ENSLBEG00000026818	sf3b4	57	98.246	ENSMFAG00000042395	SF3B4	55	97.425	Macaca_fascicularis
ENSLBEG00000026818	sf3b4	57	98.246	ENSMMUG00000007256	SF3B4	55	97.425	Macaca_mulatta
ENSLBEG00000026818	sf3b4	89	61.141	ENSMNEG00000031526	-	59	78.995	Macaca_nemestrina
ENSLBEG00000026818	sf3b4	57	98.246	ENSMNEG00000031839	SF3B4	55	97.425	Macaca_nemestrina
ENSLBEG00000026818	sf3b4	57	98.246	ENSMLEG00000038667	SF3B4	55	97.425	Mandrillus_leucophaeus
ENSLBEG00000026818	sf3b4	59	97.468	ENSMAMG00000014692	sf3b4	58	97.854	Mastacembelus_armatus
ENSLBEG00000026818	sf3b4	59	97.468	ENSMZEG00005026741	sf3b4	58	98.276	Maylandia_zebra
ENSLBEG00000026818	sf3b4	54	100.000	ENSMGAG00000000653	SF3B4	56	98.283	Meleagris_gallopavo
ENSLBEG00000026818	sf3b4	57	98.246	ENSMAUG00000015266	Sf3b4	55	97.425	Mesocricetus_auratus
ENSLBEG00000026818	sf3b4	57	98.246	ENSMICG00000044961	SF3B4	55	97.425	Microcebus_murinus
ENSLBEG00000026818	sf3b4	51	98.049	ENSMOCG00000014155	-	55	95.089	Microtus_ochrogaster
ENSLBEG00000026818	sf3b4	57	98.246	ENSMOCG00000013658	-	55	97.425	Microtus_ochrogaster
ENSLBEG00000026818	sf3b4	65	98.456	ENSMMOG00000018032	sf3b4	59	99.142	Mola_mola
ENSLBEG00000026818	sf3b4	57	98.246	ENSMODG00000018767	SF3B4	55	97.425	Monodelphis_domestica
ENSLBEG00000026818	sf3b4	57	99.559	ENSMALG00000006174	sf3b4	58	98.283	Monopterus_albus
ENSLBEG00000026818	sf3b4	57	98.246	MGP_CAROLIEiJ_G0025365	Sf3b4	55	97.425	Mus_caroli
ENSLBEG00000026818	sf3b4	57	98.246	ENSMUSG00000068856	Sf3b4	55	97.425	Mus_musculus
ENSLBEG00000026818	sf3b4	57	98.246	MGP_PahariEiJ_G0026809	Sf3b4	55	97.425	Mus_pahari
ENSLBEG00000026818	sf3b4	57	98.246	MGP_SPRETEiJ_G0026309	Sf3b4	55	97.425	Mus_spretus
ENSLBEG00000026818	sf3b4	57	98.246	ENSMPUG00000005563	SF3B4	55	97.425	Mustela_putorius_furo
ENSLBEG00000026818	sf3b4	57	98.246	ENSMLUG00000010789	SF3B4	55	96.996	Myotis_lucifugus
ENSLBEG00000026818	sf3b4	57	98.246	ENSNGAG00000016337	Sf3b4	55	97.425	Nannospalax_galili
ENSLBEG00000026818	sf3b4	59	97.890	ENSNBRG00000013865	sf3b4	58	98.707	Neolamprologus_brichardi
ENSLBEG00000026818	sf3b4	99	49.531	ENSNLEG00000009693	-	99	49.531	Nomascus_leucogenys
ENSLBEG00000026818	sf3b4	99	65.196	ENSNLEG00000000537	-	59	88.362	Nomascus_leucogenys
ENSLBEG00000026818	sf3b4	57	93.860	ENSOPRG00000010808	SF3B4	55	93.133	Ochotona_princeps
ENSLBEG00000026818	sf3b4	91	59.259	ENSODEG00000008916	-	55	76.415	Octodon_degus
ENSLBEG00000026818	sf3b4	59	97.046	ENSONIG00000002730	sf3b4	58	98.276	Oreochromis_niloticus
ENSLBEG00000026818	sf3b4	57	98.246	ENSOCUG00000004614	SF3B4	55	97.425	Oryctolagus_cuniculus
ENSLBEG00000026818	sf3b4	86	87.679	ENSORLG00000003062	sf3b4	60	98.707	Oryzias_latipes
ENSLBEG00000026818	sf3b4	74	89.000	ENSORLG00020000687	sf3b4	58	98.707	Oryzias_latipes_hni
ENSLBEG00000026818	sf3b4	74	89.000	ENSORLG00015010989	sf3b4	58	98.707	Oryzias_latipes_hsok
ENSLBEG00000026818	sf3b4	73	87.205	ENSOMEG00000013694	sf3b4	74	86.689	Oryzias_melastigma
ENSLBEG00000026818	sf3b4	57	98.246	ENSOGAG00000006265	SF3B4	55	97.425	Otolemur_garnettii
ENSLBEG00000026818	sf3b4	57	98.246	ENSOARG00000020718	-	55	97.425	Ovis_aries
ENSLBEG00000026818	sf3b4	76	70.724	ENSOARG00000007368	-	55	81.858	Ovis_aries
ENSLBEG00000026818	sf3b4	76	74.121	ENSPPAG00000030024	-	57	87.500	Pan_paniscus
ENSLBEG00000026818	sf3b4	57	98.246	ENSPPAG00000040904	SF3B4	55	97.425	Pan_paniscus
ENSLBEG00000026818	sf3b4	57	98.246	ENSPPRG00000007384	SF3B4	55	97.425	Panthera_pardus
ENSLBEG00000026818	sf3b4	57	98.246	ENSPTIG00000014530	SF3B4	55	97.425	Panthera_tigris_altaica
ENSLBEG00000026818	sf3b4	57	98.246	ENSPTRG00000001243	SF3B4	55	97.425	Pan_troglodytes
ENSLBEG00000026818	sf3b4	76	74.593	ENSPTRG00000049727	-	58	87.931	Pan_troglodytes
ENSLBEG00000026818	sf3b4	57	98.246	ENSPANG00000005126	SF3B4	55	97.425	Papio_anubis
ENSLBEG00000026818	sf3b4	58	99.138	ENSPKIG00000020669	sf3b4	62	98.712	Paramormyrops_kingsleyae
ENSLBEG00000026818	sf3b4	71	71.986	ENSPSIG00000009565	SF3B4	69	97.354	Pelodiscus_sinensis
ENSLBEG00000026818	sf3b4	57	98.246	ENSPEMG00000017568	Sf3b4	55	97.425	Peromyscus_maniculatus_bairdii
ENSLBEG00000026818	sf3b4	53	95.305	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSLBEG00000026818	sf3b4	57	98.246	ENSPCIG00000008765	SF3B4	55	97.425	Phascolarctos_cinereus
ENSLBEG00000026818	sf3b4	67	94.382	ENSPFOG00000005754	sf3b4	59	97.854	Poecilia_formosa
ENSLBEG00000026818	sf3b4	67	94.382	ENSPLAG00000001401	sf3b4	64	98.276	Poecilia_latipinna
ENSLBEG00000026818	sf3b4	67	94.757	ENSPREG00000011076	sf3b4	58	98.283	Poecilia_reticulata
ENSLBEG00000026818	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSLBEG00000026818	sf3b4	57	98.246	ENSPCOG00000015399	SF3B4	55	97.425	Propithecus_coquereli
ENSLBEG00000026818	sf3b4	57	98.246	ENSPVAG00000014171	SF3B4	55	97.425	Pteropus_vampyrus
ENSLBEG00000026818	sf3b4	59	97.468	ENSPNYG00000012700	sf3b4	58	98.276	Pundamilia_nyererei
ENSLBEG00000026818	sf3b4	58	98.696	ENSPNAG00000000686	sf3b4	59	97.854	Pygocentrus_nattereri
ENSLBEG00000026818	sf3b4	57	98.246	ENSRNOG00000021181	Sf3b4	55	97.425	Rattus_norvegicus
ENSLBEG00000026818	sf3b4	57	98.246	ENSRBIG00000043392	SF3B4	55	97.425	Rhinopithecus_bieti
ENSLBEG00000026818	sf3b4	57	98.246	ENSRROG00000029366	SF3B4	55	97.425	Rhinopithecus_roxellana
ENSLBEG00000026818	sf3b4	92	57.143	ENSRROG00000028213	-	57	74.554	Rhinopithecus_roxellana
ENSLBEG00000026818	sf3b4	76	64.263	ENSSBOG00000025174	-	50	76.293	Saimiri_boliviensis_boliviensis
ENSLBEG00000026818	sf3b4	57	97.807	ENSSBOG00000012310	-	55	96.996	Saimiri_boliviensis_boliviensis
ENSLBEG00000026818	sf3b4	57	93.421	ENSSHAG00000004043	SF3B4	54	92.704	Sarcophilus_harrisii
ENSLBEG00000026818	sf3b4	59	97.890	ENSSFOG00015008864	sf3b4	57	98.283	Scleropages_formosus
ENSLBEG00000026818	sf3b4	100	87.531	ENSSMAG00000006837	sf3b4	58	98.712	Scophthalmus_maximus
ENSLBEG00000026818	sf3b4	66	93.985	ENSSDUG00000012064	sf3b4	58	98.712	Seriola_dumerili
ENSLBEG00000026818	sf3b4	100	96.030	ENSSLDG00000014226	sf3b4	100	96.030	Seriola_lalandi_dorsalis
ENSLBEG00000026818	sf3b4	58	100.000	ENSSPAG00000019219	sf3b4	58	99.571	Stegastes_partitus
ENSLBEG00000026818	sf3b4	79	57.680	ENSSSCG00000039440	-	56	64.224	Sus_scrofa
ENSLBEG00000026818	sf3b4	57	98.246	ENSSSCG00000006665	-	55	97.425	Sus_scrofa
ENSLBEG00000026818	sf3b4	59	97.458	ENSTGUG00000004470	SF3B4	92	97.854	Taeniopygia_guttata
ENSLBEG00000026818	sf3b4	79	90.536	ENSTRUG00000004516	sf3b4	59	97.425	Takifugu_rubripes
ENSLBEG00000026818	sf3b4	66	94.717	ENSTNIG00000009156	sf3b4	60	98.283	Tetraodon_nigroviridis
ENSLBEG00000026818	sf3b4	57	98.246	ENSTTRG00000005217	SF3B4	55	97.425	Tursiops_truncatus
ENSLBEG00000026818	sf3b4	57	98.246	ENSUAMG00000022468	SF3B4	55	97.425	Ursus_americanus
ENSLBEG00000026818	sf3b4	57	98.246	ENSUMAG00000003802	SF3B4	55	97.425	Ursus_maritimus
ENSLBEG00000026818	sf3b4	54	98.148	ENSVPAG00000008152	SF3B4	54	97.285	Vicugna_pacos
ENSLBEG00000026818	sf3b4	57	98.246	ENSVVUG00000007732	-	60	97.425	Vulpes_vulpes
ENSLBEG00000026818	sf3b4	76	77.888	ENSXETG00000011038	sf3b4	58	94.118	Xenopus_tropicalis
ENSLBEG00000026818	sf3b4	67	93.633	ENSXCOG00000019895	sf3b4	60	98.283	Xiphophorus_couchianus
ENSLBEG00000026818	sf3b4	66	93.609	ENSXMAG00000003772	sf3b4	60	98.283	Xiphophorus_maculatus