EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000026845 (Gene tree)
Gene ID
109984495
Gene Symbol
pabpc1b
Alias
-
Full Name
polyadenylate-binding protein 1
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
9726 bases
Position
chrFKLU01000072.1:1452114-1461839
Accession
109984495
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000035803PABPPF00658.188e-3211
ENSLBEP00000035803RRM_5PF13893.67.5e-0812
ENSLBEP00000035803RRM_5PF13893.67.5e-0822
ENSLBEP00000035803RRM_1PF00076.223.3e-8914
ENSLBEP00000035803RRM_1PF00076.223.3e-8924
ENSLBEP00000035803RRM_1PF00076.223.3e-8934
ENSLBEP00000035803RRM_1PF00076.223.3e-8944
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000037316-6525XM_020634677ENSLBEP00000035803633 (aa)XP_020490333UPI0009B3A56A
Gene Model
Click here to download ENSLBEG00000026845's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026845's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000026845pabpc1b5936.000ENSLBEG00000012897rbm197036.000
ENSLBEG00000026845pabpc1b5937.349ENSLBEG00000027924ELAVL28537.349
ENSLBEG00000026845pabpc1b5937.349ENSLBEG00000008073elavl38830.719
ENSLBEG00000026845pabpc1b5943.056ENSLBEG00000008018-5243.056
ENSLBEG00000026845pabpc1b10089.812ENSLBEG00000024002-10089.812
ENSLBEG00000026845pabpc1b5631.111ENSLBEG00000000122-7031.111
ENSLBEG00000026845pabpc1b6041.026ENSLBEG00000009909rbm39b7141.026
ENSLBEG00000026845pabpc1b9868.000ENSLBEG00000010084pabpc1l9967.846
ENSLBEG00000026845pabpc1b5136.047ENSLBEG00000010618-5336.047
ENSLBEG00000026845pabpc1b5936.145ENSLBEG00000007096elavl48236.145
ENSLBEG00000026845pabpc1b9974.173ENSLBEG00000013654pabpc49974.646
ENSLBEG00000026845pabpc1b5933.684ENSLBEG00000010843rbms2b6933.684
ENSLBEG00000026845pabpc1b5931.792ENSLBEG00000019073ncl5131.928
ENSLBEG00000026845pabpc1b5334.884ENSLBEG00000018296celf17434.091
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000026845pabpc1b5880.102ENSG00000184388PABPC1L2B9880.102Homo_sapiens
ENSLBEG00000026845pabpc1b5880.102ENSG00000186288PABPC1L2A9880.102Homo_sapiens
ENSLBEG00000026845pabpc1b10097.161ENSAPOG00000017776pabpc1b10097.161Acanthochromis_polyacanthus
ENSLBEG00000026845pabpc1b10089.185ENSAPOG00000015105pabpc1a10089.185Acanthochromis_polyacanthus
ENSLBEG00000026845pabpc1b5980.102ENSAMEG00000019441-9880.102Ailuropoda_melanoleuca
ENSLBEG00000026845pabpc1b10089.498ENSACIG00000004685pabpc1a10089.498Amphilophus_citrinellus
ENSLBEG00000026845pabpc1b10090.221ENSACIG00000018366pabpc1b10090.221Amphilophus_citrinellus
ENSLBEG00000026845pabpc1b10096.845ENSAOCG00000019839pabpc1b10096.845Amphiprion_ocellaris
ENSLBEG00000026845pabpc1b10089.168ENSAOCG00000011656pabpc1a10089.498Amphiprion_ocellaris
ENSLBEG00000026845pabpc1b10096.845ENSAPEG00000010435pabpc1b10096.845Amphiprion_percula
ENSLBEG00000026845pabpc1b10089.168ENSAPEG00000006963pabpc1a10089.498Amphiprion_percula
ENSLBEG00000026845pabpc1b10089.011ENSATEG00000024852pabpc1a10089.498Anabas_testudineus
ENSLBEG00000026845pabpc1b10094.969ENSATEG00000012917pabpc1b10094.969Anabas_testudineus
ENSLBEG00000026845pabpc1b5880.102ENSANAG00000019431-9880.102Aotus_nancymaae
ENSLBEG00000026845pabpc1b5880.102ENSANAG00000019429-9880.102Aotus_nancymaae
ENSLBEG00000026845pabpc1b10095.110ENSACLG00000014335pabpc1b10095.110Astatotilapia_calliptera
ENSLBEG00000026845pabpc1b9993.285ENSACLG00000009399pabpc1a10093.285Astatotilapia_calliptera
ENSLBEG00000026845pabpc1b10094.488ENSAMXG00000008599pabpc1b10094.488Astyanax_mexicanus
ENSLBEG00000026845pabpc1b5977.033ENSBTAG00000052491-9877.033Bos_taurus
ENSLBEG00000026845pabpc1b5979.024ENSBTAG00000050902-9879.024Bos_taurus
ENSLBEG00000026845pabpc1b5880.102ENSCJAG00000041326-9880.102Callithrix_jacchus
ENSLBEG00000026845pabpc1b5979.024ENSCAFG00020002052-9879.024Canis_lupus_dingo
ENSLBEG00000026845pabpc1b5880.102ENSCHIG00000011138-9880.102Capra_hircus
ENSLBEG00000026845pabpc1b5880.102ENSCHIG00000006283-9880.102Capra_hircus
ENSLBEG00000026845pabpc1b5880.102ENSTSYG00000001775-9880.102Carlito_syrichta
ENSLBEG00000026845pabpc1b5979.592ENSCPOG00000009525-9879.592Cavia_porcellus
ENSLBEG00000026845pabpc1b5880.102ENSCCAG00000031524-9880.102Cebus_capucinus
ENSLBEG00000026845pabpc1b5880.102ENSCATG00000043125-9880.102Cercocebus_atys
ENSLBEG00000026845pabpc1b5880.102ENSCATG00000042826-9880.102Cercocebus_atys
ENSLBEG00000026845pabpc1b5877.551ENSCLAG00000017412-9877.551Chinchilla_lanigera
ENSLBEG00000026845pabpc1b5877.551ENSCLAG00000017409-9877.551Chinchilla_lanigera
ENSLBEG00000026845pabpc1b5980.102ENSCSAG00000000102-9880.102Chlorocebus_sabaeus
ENSLBEG00000026845pabpc1b5879.558ENSCGRG00001023387-9677.320Cricetulus_griseus_chok1gshd
ENSLBEG00000026845pabpc1b9989.030ENSCSEG00000013324pabpc1a9989.365Cynoglossus_semilaevis
ENSLBEG00000026845pabpc1b10091.325ENSCSEG00000015241-10091.325Cynoglossus_semilaevis
ENSLBEG00000026845pabpc1b10088.871ENSCVAG00000021872pabpc1a10088.871Cyprinodon_variegatus
ENSLBEG00000026845pabpc1b10092.756ENSCVAG00000005489pabpc1b10092.756Cyprinodon_variegatus
ENSLBEG00000026845pabpc1b10094.173ENSDARG00000021140pabpc1b10094.961Danio_rerio
ENSLBEG00000026845pabpc1b10090.566ENSDARG00000017219pabpc1a10090.723Danio_rerio
ENSLBEG00000026845pabpc1b5980.423ENSDNOG00000030926-9878.571Dasypus_novemcinctus
ENSLBEG00000026845pabpc1b5877.551ENSDORG00000011362-9877.551Dipodomys_ordii
ENSLBEG00000026845pabpc1b5978.641ENSEASG00005010399-9878.641Equus_asinus_asinus
ENSLBEG00000026845pabpc1b5978.641ENSECAG00000002620-9878.641Equus_caballus
ENSLBEG00000026845pabpc1b5975.510ENSEEUG00000008203-9875.510Erinaceus_europaeus
ENSLBEG00000026845pabpc1b9990.881ENSELUG00000003614pabpc1a10090.723Esox_lucius
ENSLBEG00000026845pabpc1b5959.052ENSELUG00000005389-9759.052Esox_lucius
ENSLBEG00000026845pabpc1b10091.366ENSELUG00000015062-10091.366Esox_lucius
ENSLBEG00000026845pabpc1b5880.102ENSFCAG00000039701-9880.102Felis_catus
ENSLBEG00000026845pabpc1b5979.592ENSFDAG00000005484-9879.592Fukomys_damarensis
ENSLBEG00000026845pabpc1b10093.060ENSFHEG00000008186pabpc1b10093.060Fundulus_heteroclitus
ENSLBEG00000026845pabpc1b10088.871ENSFHEG00000018979pabpc1a10089.028Fundulus_heteroclitus
ENSLBEG00000026845pabpc1b9989.009ENSGMOG00000013448pabpc1a10088.872Gadus_morhua
ENSLBEG00000026845pabpc1b10084.891ENSGMOG00000002448-10084.891Gadus_morhua
ENSLBEG00000026845pabpc1b10094.164ENSGAFG00000010193pabpc1b10094.164Gambusia_affinis
ENSLBEG00000026845pabpc1b10088.558ENSGAFG00000019750pabpc1a10088.871Gambusia_affinis
ENSLBEG00000026845pabpc1b10090.125ENSGACG00000003572pabpc1a10090.125Gasterosteus_aculeatus
ENSLBEG00000026845pabpc1b10092.991ENSGACG00000003771pabpc1b10093.302Gasterosteus_aculeatus
ENSLBEG00000026845pabpc1b5880.102ENSGGOG00000038606-9880.102Gorilla_gorilla
ENSLBEG00000026845pabpc1b5880.102ENSGGOG00000043933-9880.102Gorilla_gorilla
ENSLBEG00000026845pabpc1b9993.285ENSHBUG00000020487pabpc1a10093.285Haplochromis_burtoni
ENSLBEG00000026845pabpc1b10095.110ENSHBUG00000002075pabpc1b10095.110Haplochromis_burtoni
ENSLBEG00000026845pabpc1b5878.571ENSHGLG00000019762-9878.571Heterocephalus_glaber_female
ENSLBEG00000026845pabpc1b5878.571ENSHGLG00000019668-9878.571Heterocephalus_glaber_female
ENSLBEG00000026845pabpc1b5878.571ENSHGLG00100020854-9878.571Heterocephalus_glaber_male
ENSLBEG00000026845pabpc1b9871.036ENSHCOG00000003175pabpc1b9970.921Hippocampus_comes
ENSLBEG00000026845pabpc1b10088.383ENSHCOG00000013502pabpc1a10088.715Hippocampus_comes
ENSLBEG00000026845pabpc1b10086.593ENSIPUG00000010791-10086.593Ictalurus_punctatus
ENSLBEG00000026845pabpc1b10088.031ENSIPUG00000008848pabpc1a10088.031Ictalurus_punctatus
ENSLBEG00000026845pabpc1b7455.532ENSIPUG00000021244-6555.532Ictalurus_punctatus
ENSLBEG00000026845pabpc1b7555.224ENSIPUG00000018724-7855.224Ictalurus_punctatus
ENSLBEG00000026845pabpc1b5979.592ENSSTOG00000026028-9879.592Ictidomys_tridecemlineatus
ENSLBEG00000026845pabpc1b5979.592ENSSTOG00000022096-9879.592Ictidomys_tridecemlineatus
ENSLBEG00000026845pabpc1b5878.061ENSJJAG00000007037-9878.061Jaculus_jaculus
ENSLBEG00000026845pabpc1b10089.498ENSKMAG00000000605pabpc1a10089.342Kryptolebias_marmoratus
ENSLBEG00000026845pabpc1b10092.744ENSKMAG00000008049pabpc1b10093.060Kryptolebias_marmoratus
ENSLBEG00000026845pabpc1b5979.487ENSLAFG00000023096-9879.487Loxodonta_africana
ENSLBEG00000026845pabpc1b5879.695ENSMFAG00000028878-9879.695Macaca_fascicularis
ENSLBEG00000026845pabpc1b5880.102ENSMMUG00000039929-9880.102Macaca_mulatta
ENSLBEG00000026845pabpc1b5880.102ENSMMUG00000037681-9880.102Macaca_mulatta
ENSLBEG00000026845pabpc1b5880.102ENSMMUG00000009740-9880.102Macaca_mulatta
ENSLBEG00000026845pabpc1b5880.102ENSMNEG00000037732-9880.102Macaca_nemestrina
ENSLBEG00000026845pabpc1b5880.102ENSMLEG00000027495-9880.102Mandrillus_leucophaeus
ENSLBEG00000026845pabpc1b10095.584ENSMAMG00000014610pabpc1b10095.584Mastacembelus_armatus
ENSLBEG00000026845pabpc1b9992.806ENSMAMG00000004502-10092.806Mastacembelus_armatus
ENSLBEG00000026845pabpc1b9993.285ENSMZEG00005025416pabpc1a10093.285Maylandia_zebra
ENSLBEG00000026845pabpc1b10095.110ENSMZEG00005026745pabpc1b10095.110Maylandia_zebra
ENSLBEG00000026845pabpc1b5880.102ENSMICG00000047642-9880.102Microcebus_murinus
ENSLBEG00000026845pabpc1b9992.566ENSMMOG00000018044pabpc1a10092.566Mola_mola
ENSLBEG00000026845pabpc1b10089.415ENSMMOG00000018009pabpc1b10089.573Mola_mola
ENSLBEG00000026845pabpc1b9966.614ENSMODG00000015024-9966.614Monodelphis_domestica
ENSLBEG00000026845pabpc1b9873.558ENSMODG00000013156-9874.045Monodelphis_domestica
ENSLBEG00000026845pabpc1b10088.942ENSMALG00000006066pabpc1b10089.100Monopterus_albus
ENSLBEG00000026845pabpc1b10088.540ENSMALG00000013020-10089.028Monopterus_albus
ENSLBEG00000026845pabpc1b5881.421ENSNGAG00000012688-9878.061Nannospalax_galili
ENSLBEG00000026845pabpc1b10095.268ENSNBRG00000013737pabpc1b10095.268Neolamprologus_brichardi
ENSLBEG00000026845pabpc1b9993.285ENSNBRG00000003068-10093.285Neolamprologus_brichardi
ENSLBEG00000026845pabpc1b5880.102ENSNLEG00000018128-9880.102Nomascus_leucogenys
ENSLBEG00000026845pabpc1b5879.082ENSODEG00000018540-9879.082Octodon_degus
ENSLBEG00000026845pabpc1b10088.871ENSONIG00000006871-10088.871Oreochromis_niloticus
ENSLBEG00000026845pabpc1b10094.795ENSONIG00000002717pabpc1b10094.795Oreochromis_niloticus
ENSLBEG00000026845pabpc1b5980.102ENSOCUG00000002565-9880.102Oryctolagus_cuniculus
ENSLBEG00000026845pabpc1b10085.804ENSORLG00000003008-10085.804Oryzias_latipes
ENSLBEG00000026845pabpc1b9992.874ENSORLG00000002691pabpc1a9692.874Oryzias_latipes
ENSLBEG00000026845pabpc1b10085.804ENSORLG00020022259-10085.804Oryzias_latipes_hni
ENSLBEG00000026845pabpc1b10088.226ENSORLG00020022398pabpc1a10088.558Oryzias_latipes_hni
ENSLBEG00000026845pabpc1b10086.120ENSORLG00015010932-10086.120Oryzias_latipes_hsok
ENSLBEG00000026845pabpc1b10088.069ENSORLG00015013633pabpc110088.401Oryzias_latipes_hsok
ENSLBEG00000026845pabpc1b9583.524ENSOMEG00000013627pabpc1b10083.524Oryzias_melastigma
ENSLBEG00000026845pabpc1b10088.383ENSOMEG00000020219pabpc1a10088.871Oryzias_melastigma
ENSLBEG00000026845pabpc1b5980.102ENSOGAG00000026047-9880.102Otolemur_garnettii
ENSLBEG00000026845pabpc1b5980.102ENSOGAG00000029513-9880.102Otolemur_garnettii
ENSLBEG00000026845pabpc1b5980.102ENSOARG00000005943-9880.102Ovis_aries
ENSLBEG00000026845pabpc1b5880.102ENSPPAG00000012920-9880.102Pan_paniscus
ENSLBEG00000026845pabpc1b5980.102ENSPPRG00000011804-9880.102Panthera_pardus
ENSLBEG00000026845pabpc1b5980.102ENSPPRG00000011809-9880.102Panthera_pardus
ENSLBEG00000026845pabpc1b5880.102ENSPTRG00000028252-9880.102Pan_troglodytes
ENSLBEG00000026845pabpc1b5880.102ENSPANG00000011549-9880.102Papio_anubis
ENSLBEG00000026845pabpc1b10094.646ENSPKIG00000005676pabpc1b10094.488Paramormyrops_kingsleyae
ENSLBEG00000026845pabpc1b7094.395ENSPMGG00000023134-9794.395Periophthalmus_magnuspinnatus
ENSLBEG00000026845pabpc1b7092.152ENSPMGG00000022487pabpc1a9292.152Periophthalmus_magnuspinnatus
ENSLBEG00000026845pabpc1b9970.382ENSPCIG00000016995-5570.382Phascolarctos_cinereus
ENSLBEG00000026845pabpc1b10093.849ENSPFOG00000005917pabpc1b10093.849Poecilia_formosa
ENSLBEG00000026845pabpc1b10087.385ENSPFOG00000010815pabpc1a10087.692Poecilia_formosa
ENSLBEG00000026845pabpc1b10089.028ENSPLAG00000004114pabpc1a10089.342Poecilia_latipinna
ENSLBEG00000026845pabpc1b10094.164ENSPLAG00000001388pabpc1b10094.164Poecilia_latipinna
ENSLBEG00000026845pabpc1b10089.028ENSPMEG00000001334pabpc1a10089.342Poecilia_mexicana
ENSLBEG00000026845pabpc1b10093.849ENSPMEG00000014399pabpc1b10093.849Poecilia_mexicana
ENSLBEG00000026845pabpc1b9992.806ENSPREG00000019595pabpc1a10092.806Poecilia_reticulata
ENSLBEG00000026845pabpc1b10094.164ENSPREG00000010911pabpc1b10094.164Poecilia_reticulata
ENSLBEG00000026845pabpc1b5980.102ENSPPYG00000020468-9880.102Pongo_abelii
ENSLBEG00000026845pabpc1b5980.102ENSPCAG00000005308-9880.102Procavia_capensis
ENSLBEG00000026845pabpc1b5879.592ENSPCOG00000026349-9879.592Propithecus_coquereli
ENSLBEG00000026845pabpc1b5980.513ENSPVAG00000016117-9880.513Pteropus_vampyrus
ENSLBEG00000026845pabpc1b10095.110ENSPNYG00000012578pabpc1b10095.110Pundamilia_nyererei
ENSLBEG00000026845pabpc1b10089.342ENSPNYG00000005192pabpc1a10089.342Pundamilia_nyererei
ENSLBEG00000026845pabpc1b10093.701ENSPNAG00000024626pabpc1b10093.701Pygocentrus_nattereri
ENSLBEG00000026845pabpc1b10089.623ENSPNAG00000028408pabpc1a10089.623Pygocentrus_nattereri
ENSLBEG00000026845pabpc1b5880.102ENSRBIG00000027173-9880.102Rhinopithecus_bieti
ENSLBEG00000026845pabpc1b7983.333ENSRBIG00000028738-8486.593Rhinopithecus_bieti
ENSLBEG00000026845pabpc1b5880.102ENSRROG00000017404-9880.102Rhinopithecus_roxellana
ENSLBEG00000026845pabpc1b9863.462ENSSHAG00000000511-10063.462Sarcophilus_harrisii
ENSLBEG00000026845pabpc1b6980.347ENSSFOG00015019668-9180.347Scleropages_formosus
ENSLBEG00000026845pabpc1b10094.006ENSSFOG00015002752-10094.006Scleropages_formosus
ENSLBEG00000026845pabpc1b10089.921ENSSFOG00015006662pabpc1a10089.921Scleropages_formosus
ENSLBEG00000026845pabpc1b10095.268ENSSMAG00000006869pabpc1b10095.268Scophthalmus_maximus
ENSLBEG00000026845pabpc1b10089.342ENSSMAG00000010803pabpc1a10089.342Scophthalmus_maximus
ENSLBEG00000026845pabpc1b10089.498ENSSDUG00000006675pabpc1a10089.655Seriola_dumerili
ENSLBEG00000026845pabpc1b10093.997ENSSDUG00000011965pabpc1b10093.997Seriola_dumerili
ENSLBEG00000026845pabpc1b10095.768ENSSLDG00000014156pabpc1b10095.768Seriola_lalandi_dorsalis
ENSLBEG00000026845pabpc1b10089.498ENSSLDG00000011661pabpc1a10089.655Seriola_lalandi_dorsalis
ENSLBEG00000026845pabpc1b10089.011ENSSPAG00000014453-10089.342Stegastes_partitus
ENSLBEG00000026845pabpc1b10096.998ENSSPAG00000019265pabpc1b10096.998Stegastes_partitus
ENSLBEG00000026845pabpc1b5880.102ENSSSCG00000036336-9880.102Sus_scrofa
ENSLBEG00000026845pabpc1b5880.102ENSSSCG00000032167-9880.102Sus_scrofa
ENSLBEG00000026845pabpc1b10089.185ENSTRUG00000011577-10089.185Takifugu_rubripes
ENSLBEG00000026845pabpc1b10090.551ENSTRUG00000003767-10090.551Takifugu_rubripes
ENSLBEG00000026845pabpc1b10086.090ENSTNIG00000013307pabpc1a10086.090Tetraodon_nigroviridis
ENSLBEG00000026845pabpc1b10090.125ENSTNIG00000009153pabpc1b10090.125Tetraodon_nigroviridis
ENSLBEG00000026845pabpc1b5980.102ENSTTRG00000013181-9880.102Tursiops_truncatus
ENSLBEG00000026845pabpc1b5880.102ENSUAMG00000008089-9880.102Ursus_americanus
ENSLBEG00000026845pabpc1b5880.102ENSUMAG00000003364-9880.102Ursus_maritimus
ENSLBEG00000026845pabpc1b9752.606ENSUMAG00000023926-8966.575Ursus_maritimus
ENSLBEG00000026845pabpc1b5979.000ENSVVUG00000015892-9779.000Vulpes_vulpes
ENSLBEG00000026845pabpc1b9945.824ENSXETG00000015439-10045.824Xenopus_tropicalis
ENSLBEG00000026845pabpc1b10088.784ENSXCOG00000019901pabpc1b10088.942Xiphophorus_couchianus
ENSLBEG00000026845pabpc1b10085.940ENSXCOG00000017066pabpc1a10086.256Xiphophorus_couchianus
ENSLBEG00000026845pabpc1b10094.006ENSXMAG00000003753pabpc1b10094.006Xiphophorus_maculatus
ENSLBEG00000026845pabpc1b10089.028ENSXMAG00000002555pabpc1a10089.342Xiphophorus_maculatus

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