EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000026903 (Gene tree)
Gene ID: 109988002
Gene Symbol: prpf8
Alias: id:ibd1257|ik:tdsubc_2a9|im:7141966|tdsubc_2a9|wu:fb37c02|wu:fb73e06|xx:tdsubc_2a9|zgc:56504
Full Name: pre-mRNA processing factor 8
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 16831 bases
Position: chrFKLU01000130.1:1029669-1046499
Accession: 109988002
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000035930	RRM_4	PF10598.9	3.6e-48	1	1
ENSLBEP00000035930	U5_2-snRNA_bdg	PF10597.9	8.5e-74	1	1
ENSLBEP00000035930	PRO8NT	PF08082.11	3.3e-87	1	1
ENSLBEP00000035930	U6-snRNA_bdg	PF10596.9	1.5e-89	1	1
ENSLBEP00000035930	PROCN	PF08083.11	3.8e-235	1	1
ENSLBEP00000035930	PRP8_domainIV	PF12134.8	5e-130	1	1
ENSLBEP00000035930	PROCT	PF08084.11	3.3e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037445	-	7765	XM_020639313	ENSLBEP00000035930	2338 (aa)	XP_020494969	UPI0009B4CD09

Gene Model

Click here to download ENSLBEG00000026903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000026903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000026903	prpf8	100	97.478	ENSG00000174231	PRPF8	100	97.478	Homo_sapiens
ENSLBEG00000026903	prpf8	100	99.487	ENSAPOG00000010079	prpf8	100	99.487	Acanthochromis_polyacanthus
ENSLBEG00000026903	prpf8	100	97.478	ENSAMEG00000007940	PRPF8	100	97.478	Ailuropoda_melanoleuca
ENSLBEG00000026903	prpf8	100	97.197	ENSACIG00000018280	prpf8	100	97.197	Amphilophus_citrinellus
ENSLBEG00000026903	prpf8	100	99.444	ENSAOCG00000010725	prpf8	100	99.444	Amphiprion_ocellaris
ENSLBEG00000026903	prpf8	100	99.444	ENSAPEG00000014397	prpf8	100	99.444	Amphiprion_percula
ENSLBEG00000026903	prpf8	100	98.717	ENSATEG00000010062	prpf8	100	98.717	Anabas_testudineus
ENSLBEG00000026903	prpf8	96	97.998	ENSAPLG00000010357	PRPF8	100	97.998	Anas_platyrhynchos
ENSLBEG00000026903	prpf8	83	95.928	ENSACAG00000014784	PRPF8	99	95.928	Anolis_carolinensis
ENSLBEG00000026903	prpf8	100	97.478	ENSANAG00000032629	PRPF8	100	97.478	Aotus_nancymaae
ENSLBEG00000026903	prpf8	100	98.511	ENSACLG00000020858	prpf8	100	98.511	Astatotilapia_calliptera
ENSLBEG00000026903	prpf8	100	98.888	ENSAMXG00000020291	prpf8	100	98.888	Astyanax_mexicanus
ENSLBEG00000026903	prpf8	100	97.478	ENSBTAG00000011488	PRPF8	100	97.478	Bos_taurus
ENSLBEG00000026903	prpf8	99	86.532	WBGene00004187	prp-8	99	86.938	Caenorhabditis_elegans
ENSLBEG00000026903	prpf8	100	97.478	ENSCJAG00000001911	PRPF8	100	97.478	Callithrix_jacchus
ENSLBEG00000026903	prpf8	100	97.478	ENSCAFG00000019221	PRPF8	100	97.478	Canis_familiaris
ENSLBEG00000026903	prpf8	96	97.947	ENSCAFG00020009943	PRPF8	100	97.947	Canis_lupus_dingo
ENSLBEG00000026903	prpf8	100	97.478	ENSCHIG00000017499	PRPF8	100	97.478	Capra_hircus
ENSLBEG00000026903	prpf8	100	97.478	ENSTSYG00000014120	PRPF8	100	97.478	Carlito_syrichta
ENSLBEG00000026903	prpf8	96	95.724	ENSCAPG00000009459	PRPF8	99	95.724	Cavia_aperea
ENSLBEG00000026903	prpf8	100	97.478	ENSCPOG00000010379	PRPF8	100	97.478	Cavia_porcellus
ENSLBEG00000026903	prpf8	100	97.478	ENSCCAG00000031983	-	100	97.478	Cebus_capucinus
ENSLBEG00000026903	prpf8	100	97.478	ENSCATG00000038595	PRPF8	100	97.478	Cercocebus_atys
ENSLBEG00000026903	prpf8	100	97.478	ENSCLAG00000004388	PRPF8	100	97.478	Chinchilla_lanigera
ENSLBEG00000026903	prpf8	100	97.478	ENSCSAG00000013929	PRPF8	100	97.478	Chlorocebus_sabaeus
ENSLBEG00000026903	prpf8	81	97.333	ENSCHOG00000008590	PRPF8	88	97.333	Choloepus_hoffmanni
ENSLBEG00000026903	prpf8	100	97.519	ENSCPBG00000020409	PRPF8	100	97.519	Chrysemys_picta_bellii
ENSLBEG00000026903	prpf8	98	92.874	ENSCSAVG00000007825	-	100	91.065	Ciona_savignyi
ENSLBEG00000026903	prpf8	100	97.478	ENSCANG00000043088	PRPF8	100	97.478	Colobus_angolensis_palliatus
ENSLBEG00000026903	prpf8	73	99.016	ENSCGRG00000005129	Prpf8	100	99.016	Cricetulus_griseus_crigri
ENSLBEG00000026903	prpf8	100	99.230	ENSCSEG00000007905	prpf8	100	99.230	Cynoglossus_semilaevis
ENSLBEG00000026903	prpf8	100	98.804	ENSDARG00000026180	prpf8	100	98.804	Danio_rerio
ENSLBEG00000026903	prpf8	93	97.610	ENSDNOG00000018471	PRPF8	99	97.610	Dasypus_novemcinctus
ENSLBEG00000026903	prpf8	84	96.178	ENSDORG00000006185	Prpf8	96	95.751	Dipodomys_ordii
ENSLBEG00000026903	prpf8	99	91.353	FBgn0033688	Prp8	97	91.836	Drosophila_melanogaster
ENSLBEG00000026903	prpf8	100	92.219	ENSETEG00000017592	PRPF8	100	92.219	Echinops_telfairi
ENSLBEG00000026903	prpf8	99	93.348	ENSEBUG00000006548	prpf8	99	93.348	Eptatretus_burgeri
ENSLBEG00000026903	prpf8	100	97.478	ENSEASG00005009514	PRPF8	100	97.478	Equus_asinus_asinus
ENSLBEG00000026903	prpf8	97	97.978	ENSECAG00000021318	PRPF8	100	97.978	Equus_caballus
ENSLBEG00000026903	prpf8	67	98.519	ENSEEUG00000012120	-	67	98.519	Erinaceus_europaeus
ENSLBEG00000026903	prpf8	98	97.858	ENSELUG00000007120	prpf8	99	97.858	Esox_lucius
ENSLBEG00000026903	prpf8	100	97.478	ENSFCAG00000006297	PRPF8	100	97.478	Felis_catus
ENSLBEG00000026903	prpf8	100	97.605	ENSFALG00000006628	PRPF8	100	97.605	Ficedula_albicollis
ENSLBEG00000026903	prpf8	100	97.478	ENSFDAG00000004711	PRPF8	100	97.478	Fukomys_damarensis
ENSLBEG00000026903	prpf8	100	98.676	ENSFHEG00000021084	prpf8	100	98.676	Fundulus_heteroclitus
ENSLBEG00000026903	prpf8	100	96.954	ENSGMOG00000002028	prpf8	99	96.954	Gadus_morhua
ENSLBEG00000026903	prpf8	100	97.605	ENSGALG00000002943	PRPF8	100	97.605	Gallus_gallus
ENSLBEG00000026903	prpf8	99	98.970	ENSGAFG00000010337	prpf8	99	98.970	Gambusia_affinis
ENSLBEG00000026903	prpf8	100	99.231	ENSGACG00000008504	prpf8	100	99.230	Gasterosteus_aculeatus
ENSLBEG00000026903	prpf8	100	97.562	ENSGAGG00000008350	PRPF8	100	97.562	Gopherus_agassizii
ENSLBEG00000026903	prpf8	100	97.478	ENSGGOG00000005516	PRPF8	100	97.478	Gorilla_gorilla
ENSLBEG00000026903	prpf8	100	98.760	ENSHBUG00000016192	prpf8	100	98.760	Haplochromis_burtoni
ENSLBEG00000026903	prpf8	100	97.478	ENSHGLG00000012029	PRPF8	100	97.478	Heterocephalus_glaber_female
ENSLBEG00000026903	prpf8	100	97.478	ENSHGLG00100016494	PRPF8	100	97.478	Heterocephalus_glaber_male
ENSLBEG00000026903	prpf8	100	99.102	ENSHCOG00000016414	prpf8	100	99.102	Hippocampus_comes
ENSLBEG00000026903	prpf8	100	98.931	ENSIPUG00000023230	prpf8	100	98.931	Ictalurus_punctatus
ENSLBEG00000026903	prpf8	100	97.478	ENSSTOG00000005128	PRPF8	100	97.478	Ictidomys_tridecemlineatus
ENSLBEG00000026903	prpf8	100	95.340	ENSJJAG00000021159	Prpf8	100	95.340	Jaculus_jaculus
ENSLBEG00000026903	prpf8	99	99.012	ENSKMAG00000016118	prpf8	99	99.012	Kryptolebias_marmoratus
ENSLBEG00000026903	prpf8	95	95.446	ENSLACG00000010479	PRPF8	99	98.164	Latimeria_chalumnae
ENSLBEG00000026903	prpf8	99	98.418	ENSLOCG00000005409	prpf8	99	98.418	Lepisosteus_oculatus
ENSLBEG00000026903	prpf8	100	97.478	ENSLAFG00000015445	PRPF8	100	97.478	Loxodonta_africana
ENSLBEG00000026903	prpf8	100	97.478	ENSMFAG00000039995	PRPF8	100	97.478	Macaca_fascicularis
ENSLBEG00000026903	prpf8	100	97.478	ENSMMUG00000004820	PRPF8	100	97.478	Macaca_mulatta
ENSLBEG00000026903	prpf8	100	97.478	ENSMNEG00000035713	PRPF8	100	97.478	Macaca_nemestrina
ENSLBEG00000026903	prpf8	100	97.478	ENSMLEG00000037937	PRPF8	100	97.478	Mandrillus_leucophaeus
ENSLBEG00000026903	prpf8	100	99.358	ENSMAMG00000008919	prpf8	100	99.358	Mastacembelus_armatus
ENSLBEG00000026903	prpf8	100	98.511	ENSMZEG00005015073	prpf8	100	98.511	Maylandia_zebra
ENSLBEG00000026903	prpf8	100	97.605	ENSMGAG00000004769	PRPF8	100	97.605	Meleagris_gallopavo
ENSLBEG00000026903	prpf8	100	97.478	ENSMICG00000010320	PRPF8	100	97.478	Microcebus_murinus
ENSLBEG00000026903	prpf8	100	97.478	ENSMOCG00000016838	Prpf8	100	97.478	Microtus_ochrogaster
ENSLBEG00000026903	prpf8	100	99.102	ENSMMOG00000011887	prpf8	100	99.102	Mola_mola
ENSLBEG00000026903	prpf8	100	97.478	ENSMODG00000010480	PRPF8	100	97.478	Monodelphis_domestica
ENSLBEG00000026903	prpf8	97	98.353	ENSMALG00000003558	prpf8	100	98.353	Monopterus_albus
ENSLBEG00000026903	prpf8	100	97.435	MGP_CAROLIEiJ_G0016740	Prpf8	100	97.435	Mus_caroli
ENSLBEG00000026903	prpf8	100	97.435	ENSMUSG00000020850	Prpf8	100	97.435	Mus_musculus
ENSLBEG00000026903	prpf8	100	97.392	MGP_PahariEiJ_G0017877	Prpf8	100	97.392	Mus_pahari
ENSLBEG00000026903	prpf8	100	97.435	MGP_SPRETEiJ_G0017583	Prpf8	100	97.435	Mus_spretus
ENSLBEG00000026903	prpf8	100	97.478	ENSMPUG00000013227	PRPF8	100	97.478	Mustela_putorius_furo
ENSLBEG00000026903	prpf8	100	97.353	ENSMLUG00000002666	PRPF8	100	97.353	Myotis_lucifugus
ENSLBEG00000026903	prpf8	100	95.767	ENSNGAG00000005305	Prpf8	100	95.767	Nannospalax_galili
ENSLBEG00000026903	prpf8	100	98.553	ENSNBRG00000013127	prpf8	100	98.553	Neolamprologus_brichardi
ENSLBEG00000026903	prpf8	97	96.636	ENSNLEG00000000897	PRPF8	98	96.636	Nomascus_leucogenys
ENSLBEG00000026903	prpf8	98	96.089	ENSMEUG00000015999	PRPF8	100	96.089	Notamacropus_eugenii
ENSLBEG00000026903	prpf8	100	95.767	ENSOPRG00000003102	PRPF8	100	95.509	Ochotona_princeps
ENSLBEG00000026903	prpf8	100	97.478	ENSODEG00000008468	PRPF8	100	97.478	Octodon_degus
ENSLBEG00000026903	prpf8	100	98.511	ENSONIG00000008153	prpf8	100	98.511	Oreochromis_niloticus
ENSLBEG00000026903	prpf8	82	99.065	ENSOANG00000004250	PRPF8	97	99.065	Ornithorhynchus_anatinus
ENSLBEG00000026903	prpf8	100	97.478	ENSOCUG00000000081	PRPF8	100	97.478	Oryctolagus_cuniculus
ENSLBEG00000026903	prpf8	100	98.343	ENSORLG00000008036	prpf8	100	98.343	Oryzias_latipes
ENSLBEG00000026903	prpf8	100	98.301	ENSORLG00020021070	prpf8	100	98.301	Oryzias_latipes_hni
ENSLBEG00000026903	prpf8	100	98.343	ENSORLG00015002340	prpf8	100	98.343	Oryzias_latipes_hsok
ENSLBEG00000026903	prpf8	100	96.814	ENSOMEG00000016866	prpf8	100	96.814	Oryzias_melastigma
ENSLBEG00000026903	prpf8	100	97.353	ENSOARG00000013312	PRPF8	100	97.353	Ovis_aries
ENSLBEG00000026903	prpf8	100	97.478	ENSPPAG00000042753	PRPF8	100	97.478	Pan_paniscus
ENSLBEG00000026903	prpf8	100	97.478	ENSPPRG00000008746	PRPF8	100	97.478	Panthera_pardus
ENSLBEG00000026903	prpf8	100	97.392	ENSPTIG00000019200	PRPF8	100	97.392	Panthera_tigris_altaica
ENSLBEG00000026903	prpf8	100	97.478	ENSPTRG00000039576	PRPF8	100	97.478	Pan_troglodytes
ENSLBEG00000026903	prpf8	98	97.915	ENSPANG00000024607	PRPF8	98	97.915	Papio_anubis
ENSLBEG00000026903	prpf8	100	98.295	ENSPKIG00000011201	prpf8	100	98.295	Paramormyrops_kingsleyae
ENSLBEG00000026903	prpf8	100	97.476	ENSPSIG00000013393	PRPF8	100	97.476	Pelodiscus_sinensis
ENSLBEG00000026903	prpf8	100	97.478	ENSPEMG00000021699	Prpf8	100	97.478	Peromyscus_maniculatus_bairdii
ENSLBEG00000026903	prpf8	96	93.853	ENSPMAG00000005438	prpf8	100	93.898	Petromyzon_marinus
ENSLBEG00000026903	prpf8	100	97.478	ENSPCIG00000022603	PRPF8	100	97.947	Phascolarctos_cinereus
ENSLBEG00000026903	prpf8	100	98.134	ENSPFOG00000007005	prpf8	100	98.092	Poecilia_formosa
ENSLBEG00000026903	prpf8	100	97.305	ENSPLAG00000020777	prpf8	100	97.305	Poecilia_latipinna
ENSLBEG00000026903	prpf8	100	98.134	ENSPMEG00000004051	prpf8	100	98.092	Poecilia_mexicana
ENSLBEG00000026903	prpf8	100	98.888	ENSPREG00000021902	prpf8	100	98.888	Poecilia_reticulata
ENSLBEG00000026903	prpf8	100	97.478	ENSPPYG00000007777	PRPF8	100	97.478	Pongo_abelii
ENSLBEG00000026903	prpf8	90	96.782	ENSPCAG00000008938	PRPF8	90	96.782	Procavia_capensis
ENSLBEG00000026903	prpf8	100	97.478	ENSPCOG00000015182	PRPF8	100	97.478	Propithecus_coquereli
ENSLBEG00000026903	prpf8	93	98.392	ENSPVAG00000002134	PRPF8	93	98.392	Pteropus_vampyrus
ENSLBEG00000026903	prpf8	100	98.760	ENSPNYG00000016356	prpf8	100	98.760	Pundamilia_nyererei
ENSLBEG00000026903	prpf8	100	99.059	ENSPNAG00000009247	prpf8	100	99.059	Pygocentrus_nattereri
ENSLBEG00000026903	prpf8	100	97.435	ENSRNOG00000003495	Prpf8	100	97.435	Rattus_norvegicus
ENSLBEG00000026903	prpf8	100	97.478	ENSRBIG00000031219	PRPF8	100	97.501	Rhinopithecus_bieti
ENSLBEG00000026903	prpf8	100	97.478	ENSRROG00000038014	PRPF8	100	97.501	Rhinopithecus_roxellana
ENSLBEG00000026903	prpf8	99	62.258	YHR165C	PRP8	95	62.344	Saccharomyces_cerevisiae
ENSLBEG00000026903	prpf8	100	97.478	ENSSBOG00000029717	PRPF8	100	97.478	Saimiri_boliviensis_boliviensis
ENSLBEG00000026903	prpf8	100	97.435	ENSSHAG00000006167	PRPF8	100	97.435	Sarcophilus_harrisii
ENSLBEG00000026903	prpf8	100	98.420	ENSSFOG00015013905	prpf8	100	98.420	Scleropages_formosus
ENSLBEG00000026903	prpf8	100	99.401	ENSSMAG00000017736	prpf8	100	99.401	Scophthalmus_maximus
ENSLBEG00000026903	prpf8	100	99.487	ENSSDUG00000003029	prpf8	100	99.487	Seriola_dumerili
ENSLBEG00000026903	prpf8	68	99.812	ENSSLDG00000017096	prpf8	100	99.812	Seriola_lalandi_dorsalis
ENSLBEG00000026903	prpf8	87	94.408	ENSSARG00000002892	PRPF8	87	94.408	Sorex_araneus
ENSLBEG00000026903	prpf8	100	97.520	ENSSPUG00000007463	PRPF8	100	97.520	Sphenodon_punctatus
ENSLBEG00000026903	prpf8	100	98.888	ENSSPAG00000015639	prpf8	100	98.888	Stegastes_partitus
ENSLBEG00000026903	prpf8	100	97.478	ENSSSCG00000017817	PRPF8	100	97.478	Sus_scrofa
ENSLBEG00000026903	prpf8	52	98.778	ENSTGUG00000015597	-	95	98.778	Taeniopygia_guttata
ENSLBEG00000026903	prpf8	100	97.605	ENSTGUG00000005648	-	100	97.605	Taeniopygia_guttata
ENSLBEG00000026903	prpf8	100	99.145	ENSTRUG00000015906	prpf8	100	99.145	Takifugu_rubripes
ENSLBEG00000026903	prpf8	95	99.522	ENSTNIG00000003460	prpf8	99	99.522	Tetraodon_nigroviridis
ENSLBEG00000026903	prpf8	93	98.707	ENSTBEG00000006431	PRPF8	93	98.707	Tupaia_belangeri
ENSLBEG00000026903	prpf8	100	96.922	ENSTTRG00000006869	PRPF8	100	96.922	Tursiops_truncatus
ENSLBEG00000026903	prpf8	54	96.279	ENSUAMG00000015644	-	96	96.279	Ursus_americanus
ENSLBEG00000026903	prpf8	100	97.221	ENSUMAG00000009385	PRPF8	100	97.221	Ursus_maritimus
ENSLBEG00000026903	prpf8	71	97.931	ENSVPAG00000006063	-	71	97.931	Vicugna_pacos
ENSLBEG00000026903	prpf8	100	97.478	ENSVVUG00000021695	PRPF8	99	97.478	Vulpes_vulpes
ENSLBEG00000026903	prpf8	100	97.392	ENSXETG00000022259	prpf8	100	97.392	Xenopus_tropicalis
ENSLBEG00000026903	prpf8	100	98.761	ENSXCOG00000012775	prpf8	100	98.761	Xiphophorus_couchianus
ENSLBEG00000026903	prpf8	100	98.804	ENSXMAG00000008505	prpf8	100	98.804	Xiphophorus_maculatus