EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027088 (Gene tree)
Gene ID: 109994210
Gene Symbol: -
Alias: -
Full Name: nuclear GTPase SLIP-GC-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 14834 bases
Position: chrFKLU01000010.1:2240048-2254881
Accession: 109994210
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036164	MMR_HSR1	PF01926.23	8.7e-08	1	1
ENSLBEP00000036179	MMR_HSR1	PF01926.23	8.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037682	-	2577	-	ENSLBEP00000036164	676 (aa)	-	-
ENSLBET00000037697	-	5383	XM_020647449	ENSLBEP00000036179	676 (aa)	XP_020503105	-

Gene Model

Click here to download ENSLBEG00000027088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027088	-	91	64.123	ENSLBEG00000025738	-	97	63.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027088	-	96	52.896	ENSAPEG00000008962	-	82	52.744	Amphiprion_percula
ENSLBEG00000027088	-	99	52.155	ENSAPEG00000007405	-	81	52.006	Amphiprion_percula
ENSLBEG00000027088	-	82	52.381	ENSAPEG00000007463	-	83	52.281	Amphiprion_percula
ENSLBEG00000027088	-	95	51.926	ENSATEG00000024350	-	93	51.926	Anabas_testudineus
ENSLBEG00000027088	-	96	52.824	ENSACLG00000027743	-	78	52.366	Astatotilapia_calliptera
ENSLBEG00000027088	-	72	46.465	ENSACLG00000009378	-	92	46.278	Astatotilapia_calliptera
ENSLBEG00000027088	-	97	50.837	ENSACLG00000027781	-	77	50.837	Astatotilapia_calliptera
ENSLBEG00000027088	-	93	49.289	ENSACLG00000027749	-	89	48.815	Astatotilapia_calliptera
ENSLBEG00000027088	-	92	47.377	ENSACLG00000027785	-	99	47.695	Astatotilapia_calliptera
ENSLBEG00000027088	-	96	52.439	ENSACLG00000027763	-	83	52.287	Astatotilapia_calliptera
ENSLBEG00000027088	-	97	52.055	ENSACLG00000027770	-	83	51.903	Astatotilapia_calliptera
ENSLBEG00000027088	-	96	35.072	ENSAMXG00000035650	-	93	34.928	Astyanax_mexicanus
ENSLBEG00000027088	-	91	34.202	ENSAMXG00000007315	-	82	34.049	Astyanax_mexicanus
ENSLBEG00000027088	-	97	43.433	ENSELUG00000016238	-	69	43.582	Esox_lucius
ENSLBEG00000027088	-	96	41.133	ENSELUG00000016324	-	76	40.537	Esox_lucius
ENSLBEG00000027088	-	93	41.745	ENSELUG00000016154	-	72	42.056	Esox_lucius
ENSLBEG00000027088	-	78	49.538	ENSGACG00000011412	-	81	49.538	Gasterosteus_aculeatus
ENSLBEG00000027088	-	93	31.394	ENSLOCG00000002868	-	92	31.433	Lepisosteus_oculatus
ENSLBEG00000027088	-	57	51.629	ENSMAMG00000023343	-	62	51.378	Mastacembelus_armatus
ENSLBEG00000027088	-	95	48.527	ENSMZEG00005026592	-	92	47.907	Maylandia_zebra
ENSLBEG00000027088	-	95	48.297	ENSMZEG00005023437	-	92	48.074	Maylandia_zebra
ENSLBEG00000027088	-	96	51.908	ENSMZEG00005023434	-	75	51.450	Maylandia_zebra
ENSLBEG00000027088	-	97	52.968	ENSMZEG00005023374	-	83	52.672	Maylandia_zebra
ENSLBEG00000027088	-	96	52.591	ENSMZEG00005004230	-	76	52.134	Maylandia_zebra
ENSLBEG00000027088	-	96	49.158	ENSMZEG00005023384	-	76	48.392	Maylandia_zebra
ENSLBEG00000027088	-	99	46.498	ENSMZEG00005004202	-	89	46.360	Maylandia_zebra
ENSLBEG00000027088	-	80	31.579	ENSMAUG00000014486	Nuggc	74	30.924	Mesocricetus_auratus
ENSLBEG00000027088	-	91	43.268	ENSONIG00000015367	-	100	43.268	Oreochromis_niloticus
ENSLBEG00000027088	-	94	47.401	ENSONIG00000017112	-	98	47.626	Oreochromis_niloticus
ENSLBEG00000027088	-	91	42.945	ENSONIG00000012332	-	100	42.857	Oreochromis_niloticus
ENSLBEG00000027088	-	99	48.958	ENSONIG00000005156	-	100	48.352	Oreochromis_niloticus
ENSLBEG00000027088	-	97	48.328	ENSPFOG00000006073	-	78	48.632	Poecilia_formosa
ENSLBEG00000027088	-	96	48.250	ENSPLAG00000016480	-	78	49.011	Poecilia_latipinna
ENSLBEG00000027088	-	91	49.351	ENSPMEG00000014636	-	92	49.675	Poecilia_mexicana
ENSLBEG00000027088	-	85	51.458	ENSPREG00000007347	-	98	51.630	Poecilia_reticulata
ENSLBEG00000027088	-	78	51.386	ENSPREG00000009634	-	81	51.571	Poecilia_reticulata
ENSLBEG00000027088	-	96	51.589	ENSPNYG00000002532	-	83	50.983	Pundamilia_nyererei
ENSLBEG00000027088	-	92	36.086	ENSPNAG00000003204	-	84	36.239	Pygocentrus_nattereri
ENSLBEG00000027088	-	78	46.429	ENSRBIG00000043902	NUGGC	75	49.020	Rhinopithecus_bieti
ENSLBEG00000027088	-	78	46.429	ENSSBOG00000028930	NUGGC	75	49.020	Saimiri_boliviensis_boliviensis
ENSLBEG00000027088	-	97	31.799	ENSSFOG00015023994	-	74	32.033	Scleropages_formosus
ENSLBEG00000027088	-	99	50.735	ENSSMAG00000015947	nuggc.3	79	51.324	Scophthalmus_maximus
ENSLBEG00000027088	-	72	51.229	ENSSDUG00000010293	-	81	50.851	Seriola_dumerili
ENSLBEG00000027088	-	98	50.655	ENSSPAG00000013498	-	88	50.655	Stegastes_partitus
ENSLBEG00000027088	-	99	51.395	ENSSPAG00000014020	-	85	51.689	Stegastes_partitus