EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027172 (Gene tree)
Gene ID: 109985271
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family member 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 51306 bases
Position: chrFKLU01000080.1:195712-247017
Accession: 109985271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036386	La	PF05383.17	1.8e-20	1	1
ENSLBEP00000036355	La	PF05383.17	1.9e-20	1	1
ENSLBEP00000036328	La	PF05383.17	1.9e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037907	-	3165	-	ENSLBEP00000036386	1054 (aa)	-	-
ENSLBET00000037849	-	8229	XM_020635546	ENSLBEP00000036328	1085 (aa)	XP_020491202	-
ENSLBET00000037876	-	8157	XM_020635549	ENSLBEP00000036355	1061 (aa)	XP_020491205	-

Gene Model

Click here to download ENSLBEG00000027172's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027172	larp1	91	52.140	ENSLBEG00000005655	larp1b	92	53.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027172	larp1	85	68.483	ENSG00000155506	LARP1	95	76.966	Homo_sapiens
ENSLBEG00000027172	larp1	88	95.475	ENSAPOG00000020685	larp1	99	95.475	Acanthochromis_polyacanthus
ENSLBEG00000027172	larp1	85	69.091	ENSAMEG00000016673	LARP1	97	69.091	Ailuropoda_melanoleuca
ENSLBEG00000027172	larp1	100	79.925	ENSACIG00000012994	larp1	99	79.353	Amphilophus_citrinellus
ENSLBEG00000027172	larp1	78	89.399	ENSAOCG00000007792	larp1	100	89.399	Amphiprion_ocellaris
ENSLBEG00000027172	larp1	100	87.568	ENSAPEG00000022246	larp1	100	87.477	Amphiprion_percula
ENSLBEG00000027172	larp1	99	85.222	ENSATEG00000013523	larp1	98	86.957	Anabas_testudineus
ENSLBEG00000027172	larp1	80	72.759	ENSAPLG00000007559	LARP1	97	72.759	Anas_platyrhynchos
ENSLBEG00000027172	larp1	85	69.597	ENSACAG00000004071	LARP1	97	72.926	Anolis_carolinensis
ENSLBEG00000027172	larp1	85	68.630	ENSANAG00000029949	LARP1	97	66.205	Aotus_nancymaae
ENSLBEG00000027172	larp1	100	86.250	ENSACLG00000015256	larp1	99	88.450	Astatotilapia_calliptera
ENSLBEG00000027172	larp1	99	73.098	ENSAMXG00000000859	larp1	99	74.304	Astyanax_mexicanus
ENSLBEG00000027172	larp1	96	63.544	ENSBTAG00000008443	LARP1	99	63.000	Bos_taurus
ENSLBEG00000027172	larp1	99	63.067	ENSCJAG00000004454	LARP1	99	63.182	Callithrix_jacchus
ENSLBEG00000027172	larp1	85	68.877	ENSCAFG00000017639	LARP1	97	68.877	Canis_familiaris
ENSLBEG00000027172	larp1	80	70.635	ENSCAFG00020023860	LARP1	98	70.635	Canis_lupus_dingo
ENSLBEG00000027172	larp1	99	63.196	ENSCHIG00000014414	LARP1	99	62.028	Capra_hircus
ENSLBEG00000027172	larp1	85	69.165	ENSTSYG00000013732	LARP1	96	66.559	Carlito_syrichta
ENSLBEG00000027172	larp1	75	70.109	ENSCAPG00000013865	LARP1	83	69.866	Cavia_aperea
ENSLBEG00000027172	larp1	83	69.541	ENSCPOG00000003377	LARP1	97	68.590	Cavia_porcellus
ENSLBEG00000027172	larp1	99	62.976	ENSCCAG00000025201	LARP1	99	63.182	Cebus_capucinus
ENSLBEG00000027172	larp1	98	61.111	ENSCATG00000030675	LARP1	99	61.146	Cercocebus_atys
ENSLBEG00000027172	larp1	85	68.730	ENSCLAG00000012755	LARP1	99	64.396	Chinchilla_lanigera
ENSLBEG00000027172	larp1	80	67.918	ENSCSAG00000010800	LARP1	98	68.182	Chlorocebus_sabaeus
ENSLBEG00000027172	larp1	83	65.932	ENSCHOG00000012716	LARP1	91	65.932	Choloepus_hoffmanni
ENSLBEG00000027172	larp1	90	71.782	ENSCPBG00000002173	LARP1	95	70.978	Chrysemys_picta_bellii
ENSLBEG00000027172	larp1	85	68.803	ENSCANG00000037418	LARP1	90	68.844	Colobus_angolensis_palliatus
ENSLBEG00000027172	larp1	98	63.904	ENSCGRG00001016913	Larp1	99	63.687	Cricetulus_griseus_chok1gshd
ENSLBEG00000027172	larp1	83	66.150	ENSCGRG00000009916	Larp1	98	66.150	Cricetulus_griseus_crigri
ENSLBEG00000027172	larp1	100	85.005	ENSCSEG00000016431	larp1	99	85.901	Cynoglossus_semilaevis
ENSLBEG00000027172	larp1	98	81.860	ENSCVAG00000022687	larp1	98	83.194	Cyprinodon_variegatus
ENSLBEG00000027172	larp1	99	67.606	ENSDARG00000101722	larp1	96	72.004	Danio_rerio
ENSLBEG00000027172	larp1	98	62.477	ENSDNOG00000012073	LARP1	99	62.579	Dasypus_novemcinctus
ENSLBEG00000027172	larp1	85	64.744	ENSDORG00000002897	Larp1	95	65.812	Dipodomys_ordii
ENSLBEG00000027172	larp1	80	70.171	ENSETEG00000020251	LARP1	98	69.943	Echinops_telfairi
ENSLBEG00000027172	larp1	99	62.862	ENSEASG00005001070	LARP1	99	62.523	Equus_asinus_asinus
ENSLBEG00000027172	larp1	99	62.953	ENSECAG00000017002	LARP1	79	62.387	Equus_caballus
ENSLBEG00000027172	larp1	85	64.637	ENSEEUG00000001065	LARP1	99	65.171	Erinaceus_europaeus
ENSLBEG00000027172	larp1	99	76.165	ENSELUG00000019403	larp1	99	76.902	Esox_lucius
ENSLBEG00000027172	larp1	99	62.478	ENSFCAG00000000592	LARP1	99	63.101	Felis_catus
ENSLBEG00000027172	larp1	76	74.572	ENSFALG00000008335	LARP1	98	72.448	Ficedula_albicollis
ENSLBEG00000027172	larp1	85	68.584	ENSFDAG00000021125	LARP1	97	68.477	Fukomys_damarensis
ENSLBEG00000027172	larp1	63	77.843	ENSFHEG00000020307	larp1	97	78.382	Fundulus_heteroclitus
ENSLBEG00000027172	larp1	99	67.011	ENSGALG00000040109	LARP1	96	70.693	Gallus_gallus
ENSLBEG00000027172	larp1	99	68.529	ENSGAGG00000025113	LARP1	97	74.828	Gopherus_agassizii
ENSLBEG00000027172	larp1	85	68.449	ENSGGOG00000006048	LARP1	94	64.736	Gorilla_gorilla
ENSLBEG00000027172	larp1	100	86.482	ENSHBUG00000020762	larp1	99	88.618	Haplochromis_burtoni
ENSLBEG00000027172	larp1	99	63.355	ENSHGLG00000006267	LARP1	99	63.172	Heterocephalus_glaber_female
ENSLBEG00000027172	larp1	88	57.769	ENSHGLG00100003395	-	90	56.639	Heterocephalus_glaber_male
ENSLBEG00000027172	larp1	85	68.371	ENSHGLG00100014230	-	97	68.051	Heterocephalus_glaber_male
ENSLBEG00000027172	larp1	92	91.148	ENSHCOG00000010786	larp1	99	93.689	Hippocampus_comes
ENSLBEG00000027172	larp1	92	72.533	ENSIPUG00000019105	Larp1	96	73.895	Ictalurus_punctatus
ENSLBEG00000027172	larp1	85	66.203	ENSSTOG00000005678	LARP1	96	66.310	Ictidomys_tridecemlineatus
ENSLBEG00000027172	larp1	99	60.293	ENSJJAG00000016950	Larp1	99	60.476	Jaculus_jaculus
ENSLBEG00000027172	larp1	100	84.051	ENSKMAG00000018468	larp1	99	86.179	Kryptolebias_marmoratus
ENSLBEG00000027172	larp1	94	75.225	ENSLOCG00000012457	larp1	94	80.110	Lepisosteus_oculatus
ENSLBEG00000027172	larp1	98	62.192	ENSLAFG00000008991	LARP1	99	61.987	Loxodonta_africana
ENSLBEG00000027172	larp1	85	68.449	ENSMFAG00000031651	LARP1	90	68.630	Macaca_fascicularis
ENSLBEG00000027172	larp1	85	66.024	ENSMMUG00000009411	LARP1	97	66.238	Macaca_mulatta
ENSLBEG00000027172	larp1	80	70.295	ENSMNEG00000039294	LARP1	98	70.488	Macaca_nemestrina
ENSLBEG00000027172	larp1	85	68.556	ENSMLEG00000035142	LARP1	90	68.737	Mandrillus_leucophaeus
ENSLBEG00000027172	larp1	100	85.072	ENSMAMG00000021788	larp1	98	85.283	Mastacembelus_armatus
ENSLBEG00000027172	larp1	100	86.250	ENSMZEG00005009345	larp1	99	88.450	Maylandia_zebra
ENSLBEG00000027172	larp1	86	71.690	ENSMGAG00000005696	LARP1	97	71.831	Meleagris_gallopavo
ENSLBEG00000027172	larp1	98	63.661	ENSMAUG00000001385	Larp1	99	63.611	Mesocricetus_auratus
ENSLBEG00000027172	larp1	85	67.553	ENSMICG00000000837	LARP1	98	70.635	Microcebus_murinus
ENSLBEG00000027172	larp1	98	63.904	ENSMOCG00000008920	Larp1	99	63.569	Microtus_ochrogaster
ENSLBEG00000027172	larp1	94	67.212	ENSMMOG00000013364	larp1	99	68.654	Mola_mola
ENSLBEG00000027172	larp1	85	69.775	ENSMODG00000008663	LARP1	96	69.860	Monodelphis_domestica
ENSLBEG00000027172	larp1	100	84.622	ENSMALG00000017180	larp1	99	84.412	Monopterus_albus
ENSLBEG00000027172	larp1	98	64.121	MGP_CAROLIEiJ_G0016383	Larp1	99	63.845	Mus_caroli
ENSLBEG00000027172	larp1	98	64.213	ENSMUSG00000037331	Larp1	99	63.937	Mus_musculus
ENSLBEG00000027172	larp1	98	64.062	MGP_PahariEiJ_G0017518	Larp1	99	63.787	Mus_pahari
ENSLBEG00000027172	larp1	98	64.213	MGP_SPRETEiJ_G0017225	Larp1	99	63.937	Mus_spretus
ENSLBEG00000027172	larp1	81	60.173	ENSMPUG00000013564	LARP1	99	60.109	Mustela_putorius_furo
ENSLBEG00000027172	larp1	85	65.532	ENSMLUG00000002608	LARP1	97	65.426	Myotis_lucifugus
ENSLBEG00000027172	larp1	85	66.238	ENSNGAG00000001098	Larp1	96	66.345	Nannospalax_galili
ENSLBEG00000027172	larp1	90	87.526	ENSNBRG00000008963	larp1	98	87.734	Neolamprologus_brichardi
ENSLBEG00000027172	larp1	85	67.527	ENSNLEG00000016588	LARP1	96	66.304	Nomascus_leucogenys
ENSLBEG00000027172	larp1	86	65.059	ENSMEUG00000002957	LARP1	99	65.059	Notamacropus_eugenii
ENSLBEG00000027172	larp1	85	68.770	ENSOPRG00000013014	LARP1	97	68.663	Ochotona_princeps
ENSLBEG00000027172	larp1	85	68.697	ENSODEG00000010824	LARP1	97	68.590	Octodon_degus
ENSLBEG00000027172	larp1	99	83.258	ENSONIG00000017308	larp1	99	83.287	Oreochromis_niloticus
ENSLBEG00000027172	larp1	89	66.567	ENSOANG00000005096	LARP1	98	67.137	Ornithorhynchus_anatinus
ENSLBEG00000027172	larp1	98	63.636	ENSOCUG00000013066	LARP1	99	63.586	Oryctolagus_cuniculus
ENSLBEG00000027172	larp1	100	82.178	ENSORLG00000000824	larp1	98	86.347	Oryzias_latipes
ENSLBEG00000027172	larp1	100	81.818	ENSORLG00020022241	larp1	99	82.117	Oryzias_latipes_hni
ENSLBEG00000027172	larp1	100	80.378	ENSORLG00015007538	larp1	99	81.569	Oryzias_latipes_hsok
ENSLBEG00000027172	larp1	100	79.982	ENSOMEG00000003134	larp1	99	81.061	Oryzias_melastigma
ENSLBEG00000027172	larp1	85	68.684	ENSOGAG00000016750	LARP1	97	68.471	Otolemur_garnettii
ENSLBEG00000027172	larp1	86	66.948	ENSOARG00000009893	LARP1	97	67.347	Ovis_aries
ENSLBEG00000027172	larp1	85	68.449	ENSPPAG00000042993	LARP1	90	68.630	Pan_paniscus
ENSLBEG00000027172	larp1	85	67.412	ENSPPRG00000009780	LARP1	91	67.024	Panthera_pardus
ENSLBEG00000027172	larp1	85	67.666	ENSPTIG00000007013	LARP1	91	67.452	Panthera_tigris_altaica
ENSLBEG00000027172	larp1	98	60.838	ENSPTRG00000017447	LARP1	99	61.056	Pan_troglodytes
ENSLBEG00000027172	larp1	99	61.000	ENSPANG00000008080	LARP1	99	61.146	Papio_anubis
ENSLBEG00000027172	larp1	99	75.484	ENSPKIG00000010096	larp1	99	76.085	Paramormyrops_kingsleyae
ENSLBEG00000027172	larp1	98	66.291	ENSPKIG00000017153	-	99	67.589	Paramormyrops_kingsleyae
ENSLBEG00000027172	larp1	95	77.547	ENSPMGG00000011599	larp1	98	77.943	Periophthalmus_magnuspinnatus
ENSLBEG00000027172	larp1	85	66.310	ENSPEMG00000022523	Larp1	96	66.310	Peromyscus_maniculatus_bairdii
ENSLBEG00000027172	larp1	97	64.948	ENSPCIG00000019242	LARP1	90	65.381	Phascolarctos_cinereus
ENSLBEG00000027172	larp1	100	80.501	ENSPFOG00000005836	larp1	99	81.017	Poecilia_formosa
ENSLBEG00000027172	larp1	100	80.804	ENSPLAG00000008936	larp1	99	81.523	Poecilia_latipinna
ENSLBEG00000027172	larp1	100	80.322	ENSPMEG00000013656	larp1	99	80.836	Poecilia_mexicana
ENSLBEG00000027172	larp1	88	82.825	ENSPREG00000005726	larp1	98	83.661	Poecilia_reticulata
ENSLBEG00000027172	larp1	85	66.917	ENSPCAG00000006407	LARP1	97	66.702	Procavia_capensis
ENSLBEG00000027172	larp1	85	61.538	ENSPCOG00000016949	LARP1	97	64.209	Propithecus_coquereli
ENSLBEG00000027172	larp1	97	63.038	ENSPVAG00000002262	LARP1	99	62.772	Pteropus_vampyrus
ENSLBEG00000027172	larp1	100	86.339	ENSPNYG00000007938	larp1	99	88.450	Pundamilia_nyererei
ENSLBEG00000027172	larp1	99	73.041	ENSPNAG00000021427	larp1	99	74.766	Pygocentrus_nattereri
ENSLBEG00000027172	larp1	85	66.596	ENSRNOG00000031544	Larp1	96	66.596	Rattus_norvegicus
ENSLBEG00000027172	larp1	85	68.703	ENSRBIG00000038005	LARP1	90	68.737	Rhinopithecus_bieti
ENSLBEG00000027172	larp1	85	68.556	ENSRROG00000034073	LARP1	98	70.602	Rhinopithecus_roxellana
ENSLBEG00000027172	larp1	85	68.737	ENSSBOG00000019816	LARP1	97	66.345	Saimiri_boliviensis_boliviensis
ENSLBEG00000027172	larp1	85	71.041	ENSSHAG00000011115	LARP1	97	71.041	Sarcophilus_harrisii
ENSLBEG00000027172	larp1	99	72.222	ENSSFOG00015018058	-	99	71.684	Scleropages_formosus
ENSLBEG00000027172	larp1	87	75.848	ENSSFOG00015020304	larp1	95	75.177	Scleropages_formosus
ENSLBEG00000027172	larp1	93	85.772	ENSSMAG00000007468	larp1	98	87.074	Scophthalmus_maximus
ENSLBEG00000027172	larp1	100	88.909	ENSSDUG00000000268	larp1	98	89.010	Seriola_dumerili
ENSLBEG00000027172	larp1	82	87.358	ENSSLDG00000016505	larp1	98	87.224	Seriola_lalandi_dorsalis
ENSLBEG00000027172	larp1	56	78.136	ENSSARG00000013907	-	87	79.636	Sorex_araneus
ENSLBEG00000027172	larp1	99	65.732	ENSSPUG00000012179	-	99	65.665	Sphenodon_punctatus
ENSLBEG00000027172	larp1	100	88.262	ENSSPAG00000003910	larp1	100	88.441	Stegastes_partitus
ENSLBEG00000027172	larp1	99	62.354	ENSSSCG00000017069	LARP1	99	69.551	Sus_scrofa
ENSLBEG00000027172	larp1	82	71.586	ENSTGUG00000000704	LARP1	98	71.586	Taeniopygia_guttata
ENSLBEG00000027172	larp1	99	84.112	ENSTRUG00000009470	larp1	99	84.564	Takifugu_rubripes
ENSLBEG00000027172	larp1	80	68.151	ENSTBEG00000003381	LARP1	98	67.922	Tupaia_belangeri
ENSLBEG00000027172	larp1	85	68.158	ENSTTRG00000015934	LARP1	97	68.663	Tursiops_truncatus
ENSLBEG00000027172	larp1	99	62.567	ENSUAMG00000019334	LARP1	99	62.919	Ursus_americanus
ENSLBEG00000027172	larp1	85	65.887	ENSUMAG00000002934	LARP1	94	70.401	Ursus_maritimus
ENSLBEG00000027172	larp1	80	70.635	ENSVVUG00000004644	LARP1	98	70.635	Vulpes_vulpes
ENSLBEG00000027172	larp1	93	67.956	ENSXETG00000008413	larp1	95	68.649	Xenopus_tropicalis
ENSLBEG00000027172	larp1	85	84.993	ENSXCOG00000004022	larp1	97	85.734	Xiphophorus_couchianus
ENSLBEG00000027172	larp1	100	80.304	ENSXMAG00000018780	larp1	99	81.000	Xiphophorus_maculatus