EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027205 (Gene tree)
Gene ID: 109981772
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 4-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 4063 bases
Position: chrFKLU01000035.1:2288550-2292612
Accession: 109981772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036359	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037880	-	2370	XM_020630723	ENSLBEP00000036359	177 (aa)	XP_020486379	UPI0009B374BC

Gene Model

Click here to download ENSLBEG00000027205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027205	-	63	31.967	ENSLBEG00000028426	RAB1A	57	31.967
ENSLBEG00000027205	-	99	68.927	ENSLBEG00000026532	arf5	98	68.927
ENSLBEG00000027205	-	63	30.328	ENSLBEG00000005791	-	55	30.328
ENSLBEG00000027205	-	90	40.741	ENSLBEG00000027842	-	79	40.741
ENSLBEG00000027205	-	90	40.854	ENSLBEG00000010881	ARL6	86	40.606
ENSLBEG00000027205	-	90	61.491	ENSLBEG00000024782	ARF6	88	61.491
ENSLBEG00000027205	-	99	72.316	ENSLBEG00000012002	-	98	72.316
ENSLBEG00000027205	-	90	47.826	ENSLBEG00000016494	arl2	88	47.826
ENSLBEG00000027205	-	89	30.409	ENSLBEG00000001114	sar1ab	86	30.409
ENSLBEG00000027205	-	100	68.539	ENSLBEG00000018992	arf3b	98	68.539
ENSLBEG00000027205	-	99	44.886	ENSLBEG00000017173	arl8	98	44.886
ENSLBEG00000027205	-	99	43.503	ENSLBEG00000006177	arl5c	85	43.503
ENSLBEG00000027205	-	89	48.810	ENSLBEG00000013638	arl4aa	91	48.810
ENSLBEG00000027205	-	96	49.153	ENSLBEG00000012677	arl4cb	91	49.153
ENSLBEG00000027205	-	100	69.663	ENSLBEG00000009272	arf2b	98	69.663
ENSLBEG00000027205	-	63	31.967	ENSLBEG00000021040	rab1ba	58	31.967
ENSLBEG00000027205	-	100	68.539	ENSLBEG00000023263	-	98	68.539
ENSLBEG00000027205	-	100	43.820	ENSLBEG00000016471	arl5a	99	44.633
ENSLBEG00000027205	-	89	30.409	ENSLBEG00000016945	-	86	30.409
ENSLBEG00000027205	-	94	71.257	ENSLBEG00000001998	arf1	94	71.257
ENSLBEG00000027205	-	88	44.172	ENSLBEG00000021116	arl14	77	44.172
ENSLBEG00000027205	-	63	30.328	ENSLBEG00000027226	-	50	30.328
ENSLBEG00000027205	-	96	43.931	ENSLBEG00000027806	arl3l2	93	43.931
ENSLBEG00000027205	-	69	31.783	ENSLBEG00000026779	rab13	63	31.783
ENSLBEG00000027205	-	84	32.237	ENSLBEG00000022310	arl8ba	70	32.237
ENSLBEG00000027205	-	100	68.539	ENSLBEG00000012046	-	98	68.539
ENSLBEG00000027205	-	70	32.090	ENSLBEG00000027781	rab1ab	59	32.090
ENSLBEG00000027205	-	97	36.022	ENSLBEG00000004752	arfrp1	91	36.022
ENSLBEG00000027205	-	90	47.500	ENSLBEG00000017331	-	97	45.251
ENSLBEG00000027205	-	90	50.299	ENSLBEG00000010335	-	86	50.299
ENSLBEG00000027205	-	90	52.795	ENSLBEG00000000991	arl1	92	52.795
ENSLBEG00000027205	-	86	47.500	ENSLBEG00000011152	arl4d	80	47.500
ENSLBEG00000027205	-	93	44.379	ENSLBEG00000025929	arl3	97	44.379
ENSLBEG00000027205	-	67	30.894	ENSLBEG00000019016	arl8bb	70	33.010
ENSLBEG00000027205	-	84	45.695	ENSLBEG00000015748	arl11	85	45.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027205	-	99	89.205	ENSAPEG00000002838	-	98	89.205	Amphiprion_percula
ENSLBEG00000027205	-	99	90.341	ENSATEG00000003847	-	98	90.341	Anabas_testudineus
ENSLBEG00000027205	-	99	81.250	ENSATEG00000003808	-	98	81.250	Anabas_testudineus
ENSLBEG00000027205	-	96	87.647	ENSACLG00000009822	-	91	87.647	Astatotilapia_calliptera
ENSLBEG00000027205	-	77	80.292	ENSCVAG00000013902	-	84	80.292	Cyprinodon_variegatus
ENSLBEG00000027205	-	87	87.662	ENSFHEG00000019659	-	87	87.662	Fundulus_heteroclitus
ENSLBEG00000027205	-	63	87.387	ENSGAFG00000002801	-	98	87.387	Gambusia_affinis
ENSLBEG00000027205	-	99	89.888	ENSGACG00000003831	-	99	89.888	Gasterosteus_aculeatus
ENSLBEG00000027205	-	99	85.227	ENSHBUG00000001250	-	98	85.227	Haplochromis_burtoni
ENSLBEG00000027205	-	99	88.068	ENSMAMG00000013955	-	98	88.068	Mastacembelus_armatus
ENSLBEG00000027205	-	99	87.500	ENSMZEG00005016274	-	98	87.500	Maylandia_zebra
ENSLBEG00000027205	-	99	87.500	ENSMZEG00005016277	-	98	87.500	Maylandia_zebra
ENSLBEG00000027205	-	99	81.250	ENSMMOG00000013651	-	97	81.250	Mola_mola
ENSLBEG00000027205	-	99	85.795	ENSONIG00000004340	-	98	85.795	Oreochromis_niloticus
ENSLBEG00000027205	-	99	86.364	ENSPLAG00000015887	-	98	86.364	Poecilia_latipinna
ENSLBEG00000027205	-	99	86.364	ENSPMEG00000007064	-	98	86.364	Poecilia_mexicana
ENSLBEG00000027205	-	97	86.550	ENSPREG00000000912	-	100	86.550	Poecilia_reticulata
ENSLBEG00000027205	-	99	74.879	ENSSMAG00000002487	-	99	74.879	Scophthalmus_maximus
ENSLBEG00000027205	-	99	87.500	ENSSDUG00000020599	-	98	87.500	Seriola_dumerili
ENSLBEG00000027205	-	99	87.500	ENSSLDG00000020097	-	98	87.500	Seriola_lalandi_dorsalis
ENSLBEG00000027205	-	99	89.773	ENSSPAG00000017484	-	98	89.773	Stegastes_partitus
ENSLBEG00000027205	-	90	77.987	ENSTRUG00000025171	-	98	77.987	Takifugu_rubripes
ENSLBEG00000027205	-	84	78.000	ENSTNIG00000018302	-	78	71.348	Tetraodon_nigroviridis
ENSLBEG00000027205	-	84	81.208	ENSTNIG00000001632	-	78	74.011	Tetraodon_nigroviridis
ENSLBEG00000027205	-	63	82.143	ENSTNIG00000005043	-	99	82.143	Tetraodon_nigroviridis
ENSLBEG00000027205	-	89	78.344	ENSTNIG00000000796	-	78	74.011	Tetraodon_nigroviridis
ENSLBEG00000027205	-	99	86.364	ENSXMAG00000029601	-	98	86.364	Xiphophorus_maculatus