EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000027208 (Gene tree)
Gene ID: 109993371
Gene Symbol: urb1
Alias: mp:zf637-1-000544|zf637-1-000544
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 11634 bases
Position: chrFKLU01000255.1:84852-96485
Accession: 109993371
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036395	Npa1	PF11707.8	3e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037918	-	6138	XM_020646321	ENSLBEP00000036395	2045 (aa)	XP_020501977	-

Gene Model

Click here to download ENSLBEG00000027208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027208	urb1	98	51.668	ENSG00000142207	URB1	94	51.109	Homo_sapiens
ENSLBEG00000027208	urb1	99	69.377	ENSAPOG00000020308	urb1	97	71.328	Acanthochromis_polyacanthus
ENSLBEG00000027208	urb1	99	51.895	ENSAMEG00000011998	URB1	97	41.933	Ailuropoda_melanoleuca
ENSLBEG00000027208	urb1	98	65.847	ENSACIG00000003248	urb1	97	65.799	Amphilophus_citrinellus
ENSLBEG00000027208	urb1	99	71.346	ENSAOCG00000010364	urb1	97	71.346	Amphiprion_ocellaris
ENSLBEG00000027208	urb1	99	69.140	ENSAPEG00000010758	urb1	96	69.187	Amphiprion_percula
ENSLBEG00000027208	urb1	99	69.344	ENSATEG00000011790	urb1	97	69.344	Anabas_testudineus
ENSLBEG00000027208	urb1	97	54.436	ENSAPLG00000012791	URB1	98	43.776	Anas_platyrhynchos
ENSLBEG00000027208	urb1	99	41.581	ENSACAG00000002817	URB1	97	41.715	Anolis_carolinensis
ENSLBEG00000027208	urb1	99	52.559	ENSANAG00000024617	URB1	95	52.201	Aotus_nancymaae
ENSLBEG00000027208	urb1	99	73.426	ENSACLG00000024865	urb1	95	73.426	Astatotilapia_calliptera
ENSLBEG00000027208	urb1	98	46.746	ENSAMXG00000012306	urb1	96	46.746	Astyanax_mexicanus
ENSLBEG00000027208	urb1	98	51.055	ENSBTAG00000012412	URB1	96	41.310	Bos_taurus
ENSLBEG00000027208	urb1	99	51.765	ENSCJAG00000009118	URB1	97	41.293	Callithrix_jacchus
ENSLBEG00000027208	urb1	99	51.301	ENSCAFG00000008892	URB1	97	41.103	Canis_familiaris
ENSLBEG00000027208	urb1	99	51.420	ENSCAFG00020025994	-	97	40.624	Canis_lupus_dingo
ENSLBEG00000027208	urb1	99	51.212	ENSCAFG00020025987	-	97	40.964	Canis_lupus_dingo
ENSLBEG00000027208	urb1	98	51.541	ENSCHIG00000015645	URB1	93	51.647	Capra_hircus
ENSLBEG00000027208	urb1	99	50.372	ENSTSYG00000013286	URB1	94	50.372	Carlito_syrichta
ENSLBEG00000027208	urb1	97	49.332	ENSCAPG00000015589	URB1	94	49.332	Cavia_aperea
ENSLBEG00000027208	urb1	99	51.109	ENSCPOG00000006748	URB1	95	51.109	Cavia_porcellus
ENSLBEG00000027208	urb1	99	51.931	ENSCCAG00000021299	URB1	97	41.663	Cebus_capucinus
ENSLBEG00000027208	urb1	99	52.086	ENSCATG00000042630	URB1	95	51.836	Cercocebus_atys
ENSLBEG00000027208	urb1	99	50.894	ENSCLAG00000005262	URB1	94	50.894	Chinchilla_lanigera
ENSLBEG00000027208	urb1	99	50.266	ENSCSAG00000009584	URB1	95	50.052	Chlorocebus_sabaeus
ENSLBEG00000027208	urb1	99	44.175	ENSCPBG00000006454	URB1	96	44.309	Chrysemys_picta_bellii
ENSLBEG00000027208	urb1	99	52.193	ENSCANG00000031088	URB1	97	41.629	Colobus_angolensis_palliatus
ENSLBEG00000027208	urb1	98	50.378	ENSCGRG00001010616	Urb1	97	41.200	Cricetulus_griseus_chok1gshd
ENSLBEG00000027208	urb1	97	50.883	ENSCGRG00000015840	Urb1	97	41.671	Cricetulus_griseus_crigri
ENSLBEG00000027208	urb1	99	73.056	ENSCSEG00000012616	urb1	95	73.056	Cynoglossus_semilaevis
ENSLBEG00000027208	urb1	95	65.235	ENSCVAG00000009076	urb1	98	64.362	Cyprinodon_variegatus
ENSLBEG00000027208	urb1	99	50.949	ENSDARG00000060308	urb1	97	51.266	Danio_rerio
ENSLBEG00000027208	urb1	86	51.899	ENSDNOG00000015586	URB1	96	51.899	Dasypus_novemcinctus
ENSLBEG00000027208	urb1	98	50.636	ENSDORG00000006735	Urb1	96	41.171	Dipodomys_ordii
ENSLBEG00000027208	urb1	86	53.220	ENSETEG00000009080	URB1	82	53.220	Echinops_telfairi
ENSLBEG00000027208	urb1	99	50.689	ENSEASG00005007711	URB1	96	44.604	Equus_asinus_asinus
ENSLBEG00000027208	urb1	99	52.197	ENSECAG00000013206	URB1	97	42.112	Equus_caballus
ENSLBEG00000027208	urb1	99	56.273	ENSELUG00000020516	urb1	92	64.545	Esox_lucius
ENSLBEG00000027208	urb1	98	52.039	ENSFCAG00000002177	URB1	96	41.296	Felis_catus
ENSLBEG00000027208	urb1	98	41.477	ENSFALG00000004636	URB1	97	41.519	Ficedula_albicollis
ENSLBEG00000027208	urb1	98	51.288	ENSFDAG00000007288	URB1	90	50.787	Fukomys_damarensis
ENSLBEG00000027208	urb1	99	59.808	ENSFHEG00000000202	urb1	97	59.945	Fundulus_heteroclitus
ENSLBEG00000027208	urb1	94	55.507	ENSGMOG00000001838	urb1	91	56.410	Gadus_morhua
ENSLBEG00000027208	urb1	99	53.774	ENSGALG00000015887	URB1	96	53.774	Gallus_gallus
ENSLBEG00000027208	urb1	99	64.002	ENSGAFG00000020694	urb1	99	64.002	Gambusia_affinis
ENSLBEG00000027208	urb1	99	76.656	ENSGACG00000011703	urb1	95	76.656	Gasterosteus_aculeatus
ENSLBEG00000027208	urb1	98	44.460	ENSGAGG00000022544	URB1	95	44.460	Gopherus_agassizii
ENSLBEG00000027208	urb1	98	52.039	ENSGGOG00000000285	URB1	94	51.474	Gorilla_gorilla
ENSLBEG00000027208	urb1	99	73.319	ENSHBUG00000001904	urb1	95	73.319	Haplochromis_burtoni
ENSLBEG00000027208	urb1	99	48.318	ENSHGLG00000004907	URB1	94	48.318	Heterocephalus_glaber_female
ENSLBEG00000027208	urb1	99	49.947	ENSHGLG00100010749	URB1	94	49.947	Heterocephalus_glaber_male
ENSLBEG00000027208	urb1	76	66.706	ENSHCOG00000018683	urb1	98	64.692	Hippocampus_comes
ENSLBEG00000027208	urb1	99	45.217	ENSIPUG00000014721	urb1	97	45.487	Ictalurus_punctatus
ENSLBEG00000027208	urb1	97	51.672	ENSSTOG00000004539	URB1	93	51.116	Ictidomys_tridecemlineatus
ENSLBEG00000027208	urb1	99	64.616	ENSKMAG00000006001	urb1	97	64.616	Kryptolebias_marmoratus
ENSLBEG00000027208	urb1	99	49.535	ENSLACG00000017059	URB1	94	49.535	Latimeria_chalumnae
ENSLBEG00000027208	urb1	99	49.933	ENSLOCG00000009190	urb1	97	49.933	Lepisosteus_oculatus
ENSLBEG00000027208	urb1	99	41.812	ENSLAFG00000010407	URB1	97	41.812	Loxodonta_africana
ENSLBEG00000027208	urb1	99	51.499	ENSMFAG00000034391	URB1	92	51.261	Macaca_fascicularis
ENSLBEG00000027208	urb1	99	51.499	ENSMMUG00000010295	URB1	95	51.261	Macaca_mulatta
ENSLBEG00000027208	urb1	99	50.161	ENSMNEG00000032981	URB1	95	50.106	Macaca_nemestrina
ENSLBEG00000027208	urb1	99	51.820	ENSMLEG00000041435	URB1	95	51.681	Mandrillus_leucophaeus
ENSLBEG00000027208	urb1	99	67.221	ENSMAMG00000011238	urb1	97	67.221	Mastacembelus_armatus
ENSLBEG00000027208	urb1	99	66.529	ENSMZEG00005011862	urb1	95	66.529	Maylandia_zebra
ENSLBEG00000027208	urb1	97	44.316	ENSMGAG00000014512	URB1	96	44.485	Meleagris_gallopavo
ENSLBEG00000027208	urb1	87	50.755	ENSMAUG00000010516	Urb1	90	50.222	Mesocricetus_auratus
ENSLBEG00000027208	urb1	98	50.943	ENSMICG00000016424	URB1	94	51.102	Microcebus_murinus
ENSLBEG00000027208	urb1	98	50.644	ENSMOCG00000012613	Urb1	97	41.407	Microtus_ochrogaster
ENSLBEG00000027208	urb1	99	41.121	ENSMODG00000021076	URB1	97	41.121	Monodelphis_domestica
ENSLBEG00000027208	urb1	99	72.662	ENSMALG00000017411	urb1	97	72.662	Monopterus_albus
ENSLBEG00000027208	urb1	99	49.842	MGP_CAROLIEiJ_G0020948	Urb1	97	40.559	Mus_caroli
ENSLBEG00000027208	urb1	99	49.577	ENSMUSG00000039929	Urb1	97	40.696	Mus_musculus
ENSLBEG00000027208	urb1	99	49.579	MGP_PahariEiJ_G0016653	Urb1	97	40.341	Mus_pahari
ENSLBEG00000027208	urb1	99	49.736	MGP_SPRETEiJ_G0021854	Urb1	97	40.858	Mus_spretus
ENSLBEG00000027208	urb1	98	51.158	ENSMPUG00000001123	URB1	96	41.765	Mustela_putorius_furo
ENSLBEG00000027208	urb1	98	50.107	ENSNGAG00000001905	Urb1	93	50.107	Nannospalax_galili
ENSLBEG00000027208	urb1	81	68.529	ENSNBRG00000001049	urb1	95	68.529	Neolamprologus_brichardi
ENSLBEG00000027208	urb1	95	51.178	ENSNLEG00000026872	URB1	91	50.683	Nomascus_leucogenys
ENSLBEG00000027208	urb1	91	47.002	ENSMEUG00000010828	URB1	90	38.844	Notamacropus_eugenii
ENSLBEG00000027208	urb1	99	49.571	ENSOPRG00000013482	URB1	94	49.571	Ochotona_princeps
ENSLBEG00000027208	urb1	98	51.941	ENSODEG00000002587	URB1	96	41.720	Octodon_degus
ENSLBEG00000027208	urb1	99	74.145	ENSONIG00000005599	urb1	95	74.145	Oreochromis_niloticus
ENSLBEG00000027208	urb1	98	50.949	ENSOCUG00000009381	URB1	93	50.949	Oryctolagus_cuniculus
ENSLBEG00000027208	urb1	99	71.535	ENSORLG00000003429	urb1	94	71.535	Oryzias_latipes
ENSLBEG00000027208	urb1	99	71.215	ENSORLG00020013785	urb1	94	71.934	Oryzias_latipes_hni
ENSLBEG00000027208	urb1	98	68.295	ENSORLG00015019421	urb1	97	67.937	Oryzias_latipes_hsok
ENSLBEG00000027208	urb1	84	66.327	ENSOMEG00000002094	urb1	98	66.327	Oryzias_melastigma
ENSLBEG00000027208	urb1	98	50.264	ENSOGAG00000017140	URB1	94	50.527	Otolemur_garnettii
ENSLBEG00000027208	urb1	94	50.691	ENSOARG00000013679	URB1	90	50.052	Ovis_aries
ENSLBEG00000027208	urb1	98	51.824	ENSPPAG00000003423	URB1	94	51.263	Pan_paniscus
ENSLBEG00000027208	urb1	98	52.299	ENSPPRG00000023131	URB1	95	41.792	Panthera_pardus
ENSLBEG00000027208	urb1	89	51.322	ENSPTIG00000016125	URB1	94	41.974	Panthera_tigris_altaica
ENSLBEG00000027208	urb1	98	51.609	ENSPTRG00000013852	URB1	94	51.053	Pan_troglodytes
ENSLBEG00000027208	urb1	99	51.713	ENSPANG00000021964	URB1	95	51.471	Papio_anubis
ENSLBEG00000027208	urb1	99	50.180	ENSPKIG00000003683	urb1	96	50.700	Paramormyrops_kingsleyae
ENSLBEG00000027208	urb1	99	49.576	ENSPEMG00000021205	Urb1	93	49.576	Peromyscus_maniculatus_bairdii
ENSLBEG00000027208	urb1	80	37.037	ENSPMAG00000009733	URB1	97	37.552	Petromyzon_marinus
ENSLBEG00000027208	urb1	99	40.657	ENSPCIG00000016350	URB1	99	40.657	Phascolarctos_cinereus
ENSLBEG00000027208	urb1	96	62.482	ENSPLAG00000004371	urb1	97	62.482	Poecilia_latipinna
ENSLBEG00000027208	urb1	99	63.042	ENSPMEG00000006634	urb1	97	63.042	Poecilia_mexicana
ENSLBEG00000027208	urb1	99	63.057	ENSPREG00000013453	urb1	97	63.057	Poecilia_reticulata
ENSLBEG00000027208	urb1	98	51.380	ENSPPYG00000011359	URB1	93	51.380	Pongo_abelii
ENSLBEG00000027208	urb1	97	49.063	ENSPCAG00000007430	URB1	92	49.063	Procavia_capensis
ENSLBEG00000027208	urb1	98	51.057	ENSPCOG00000022695	URB1	96	41.663	Propithecus_coquereli
ENSLBEG00000027208	urb1	99	51.010	ENSPVAG00000000889	URB1	94	51.010	Pteropus_vampyrus
ENSLBEG00000027208	urb1	99	67.615	ENSPNYG00000010589	urb1	97	67.615	Pundamilia_nyererei
ENSLBEG00000027208	urb1	99	46.700	ENSPNAG00000019324	urb1	97	46.971	Pygocentrus_nattereri
ENSLBEG00000027208	urb1	99	50.000	ENSRNOG00000002080	Urb1	97	40.919	Rattus_norvegicus
ENSLBEG00000027208	urb1	99	51.544	ENSRBIG00000033122	URB1	95	51.207	Rhinopithecus_bieti
ENSLBEG00000027208	urb1	99	51.389	ENSRROG00000040237	URB1	95	51.053	Rhinopithecus_roxellana
ENSLBEG00000027208	urb1	99	51.868	ENSSBOG00000027672	URB1	97	41.398	Saimiri_boliviensis_boliviensis
ENSLBEG00000027208	urb1	99	41.749	ENSSHAG00000005140	URB1	97	41.749	Sarcophilus_harrisii
ENSLBEG00000027208	urb1	95	52.757	ENSSFOG00015000339	urb1	99	52.852	Scleropages_formosus
ENSLBEG00000027208	urb1	99	78.473	ENSSMAG00000003782	urb1	94	78.473	Scophthalmus_maximus
ENSLBEG00000027208	urb1	99	72.876	ENSSDUG00000012313	urb1	97	72.876	Seriola_dumerili
ENSLBEG00000027208	urb1	99	72.558	ENSSLDG00000023179	urb1	97	72.558	Seriola_lalandi_dorsalis
ENSLBEG00000027208	urb1	99	43.500	ENSSPUG00000012447	URB1	97	43.500	Sphenodon_punctatus
ENSLBEG00000027208	urb1	100	68.756	ENSSPAG00000006325	urb1	97	68.829	Stegastes_partitus
ENSLBEG00000027208	urb1	99	50.955	ENSSSCG00000032024	URB1	96	41.326	Sus_scrofa
ENSLBEG00000027208	urb1	74	45.221	ENSTGUG00000013442	URB1	100	45.221	Taeniopygia_guttata
ENSLBEG00000027208	urb1	99	65.575	ENSTRUG00000009372	urb1	97	65.666	Takifugu_rubripes
ENSLBEG00000027208	urb1	98	63.339	ENSTNIG00000016277	urb1	97	63.385	Tetraodon_nigroviridis
ENSLBEG00000027208	urb1	77	48.000	ENSTBEG00000010044	URB1	71	48.000	Tupaia_belangeri
ENSLBEG00000027208	urb1	88	49.779	ENSTTRG00000007712	URB1	84	50.000	Tursiops_truncatus
ENSLBEG00000027208	urb1	99	52.004	ENSUAMG00000012231	URB1	97	42.105	Ursus_americanus
ENSLBEG00000027208	urb1	89	52.695	ENSUMAG00000017419	URB1	95	43.453	Ursus_maritimus
ENSLBEG00000027208	urb1	66	62.400	ENSVPAG00000001164	URB1	61	62.400	Vicugna_pacos
ENSLBEG00000027208	urb1	99	51.429	ENSVVUG00000000551	URB1	92	52.106	Vulpes_vulpes
ENSLBEG00000027208	urb1	99	42.576	ENSXETG00000009895	urb1	97	42.576	Xenopus_tropicalis
ENSLBEG00000027208	urb1	99	62.680	ENSXCOG00000005500	urb1	98	65.176	Xiphophorus_couchianus
ENSLBEG00000027208	urb1	99	63.040	ENSXMAG00000007253	urb1	98	65.582	Xiphophorus_maculatus