EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000027221 (Gene tree)
Gene ID: 109994551
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8591 bases
Position: chrFKLU01000294.1:61346-69936
Accession: 109994551
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036387	zf-met	PF12874.7	5.1e-29	1	4
ENSLBEP00000036387	zf-met	PF12874.7	5.1e-29	2	4
ENSLBEP00000036387	zf-met	PF12874.7	5.1e-29	3	4
ENSLBEP00000036387	zf-met	PF12874.7	5.1e-29	4	4
ENSLBEP00000036379	zf-met	PF12874.7	7.7e-23	1	3
ENSLBEP00000036379	zf-met	PF12874.7	7.7e-23	2	3
ENSLBEP00000036379	zf-met	PF12874.7	7.7e-23	3	3
ENSLBEP00000036387	zf-C2H2_jaz	PF12171.8	2.3e-18	1	2
ENSLBEP00000036387	zf-C2H2_jaz	PF12171.8	2.3e-18	2	2
ENSLBEP00000036379	zf-C2H2_jaz	PF12171.8	7.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037908	-	1896	XM_020647934	ENSLBEP00000036387	628 (aa)	XP_020503590	-
ENSLBET00000037900	-	1722	-	ENSLBEP00000036379	573 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000027221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027221	-	86	65.688	ENSAPOG00000002875	-	100	65.321	Acanthochromis_polyacanthus
ENSLBEG00000027221	-	99	66.077	ENSAOCG00000007093	-	100	65.756	Amphiprion_ocellaris
ENSLBEG00000027221	-	99	63.505	ENSATEG00000023589	-	100	63.344	Anabas_testudineus
ENSLBEG00000027221	-	99	59.677	ENSACLG00000012751	-	100	60.000	Astatotilapia_calliptera
ENSLBEG00000027221	-	85	43.068	ENSCVAG00000018034	-	97	42.726	Cyprinodon_variegatus
ENSLBEG00000027221	-	58	48.062	ENSELUG00000010589	-	91	43.633	Esox_lucius
ENSLBEG00000027221	-	79	56.200	ENSGACG00000009018	-	100	55.336	Gasterosteus_aculeatus
ENSLBEG00000027221	-	99	60.484	ENSHBUG00000020963	-	100	59.839	Haplochromis_burtoni
ENSLBEG00000027221	-	83	42.720	ENSHCOG00000013075	-	100	45.298	Hippocampus_comes
ENSLBEG00000027221	-	94	42.459	ENSIPUG00000011933	-	96	40.163	Ictalurus_punctatus
ENSLBEG00000027221	-	99	60.161	ENSMZEG00005026847	-	100	59.839	Maylandia_zebra
ENSLBEG00000027221	-	85	60.861	ENSMMOG00000012396	-	96	61.798	Mola_mola
ENSLBEG00000027221	-	81	62.257	ENSMALG00000002560	-	100	62.451	Monopterus_albus
ENSLBEG00000027221	-	85	57.836	ENSSMAG00000009994	-	98	58.442	Scophthalmus_maximus
ENSLBEG00000027221	-	99	66.667	ENSSDUG00000022406	-	100	66.987	Seriola_dumerili
ENSLBEG00000027221	-	81	64.786	ENSSPAG00000018876	-	100	64.981	Stegastes_partitus