EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027226 (Gene tree)
Gene ID: 110003584
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-1B-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3093 bases
Position: chrFKLU01001201.1:50123-53215
Accession: 110003584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036383	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000037904	-	693	XM_020659151	ENSLBEP00000036383	230 (aa)	XP_020514807	-

Gene Model

Click here to download ENSLBEG00000027226's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027226's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027226	-	70	37.195	ENSLBEG00000028450	kras	96	35.519
ENSLBEG00000027226	-	70	43.713	ENSLBEG00000001193	rab42a	77	43.713
ENSLBEG00000027226	-	89	99.512	ENSLBEG00000005791	-	98	99.512
ENSLBEG00000027226	-	70	59.756	ENSLBEG00000007681	si:dkey-16l2.16	78	59.756
ENSLBEG00000027226	-	82	75.000	ENSLBEG00000028426	RAB1A	95	75.000
ENSLBEG00000027226	-	82	31.443	ENSLBEG00000019137	rhebl1	95	31.443
ENSLBEG00000027226	-	79	35.751	ENSLBEG00000018180	si:dkey-13a21.4	95	35.751
ENSLBEG00000027226	-	83	37.500	ENSLBEG00000003748	rab6a	92	37.500
ENSLBEG00000027226	-	70	49.390	ENSLBEG00000013463	rab15	77	49.390
ENSLBEG00000027226	-	66	38.994	ENSLBEG00000005128	-	71	38.994
ENSLBEG00000027226	-	73	39.884	ENSLBEG00000019372	rab6bb	79	39.884
ENSLBEG00000027226	-	73	46.199	ENSLBEG00000005981	-	95	41.148
ENSLBEG00000027226	-	82	74.479	ENSLBEG00000021040	rab1ba	95	74.479
ENSLBEG00000027226	-	77	35.567	ENSLBEG00000011478	rab9b	76	38.323
ENSLBEG00000027226	-	56	31.579	ENSLBEG00000016494	arl2	69	31.579
ENSLBEG00000027226	-	82	41.000	ENSLBEG00000019435	rab14	92	41.000
ENSLBEG00000027226	-	74	38.710	ENSLBEG00000014427	rab33a	83	38.710
ENSLBEG00000027226	-	77	38.333	ENSLBEG00000008746	RAB41	82	38.333
ENSLBEG00000027226	-	75	41.477	ENSLBEG00000003235	rab22a	90	41.477
ENSLBEG00000027226	-	77	44.444	ENSLBEG00000003101	rab4a	89	44.444
ENSLBEG00000027226	-	64	32.237	ENSLBEG00000000119	rras2	81	32.927
ENSLBEG00000027226	-	89	41.148	ENSLBEG00000016446	rab25b	95	41.148
ENSLBEG00000027226	-	73	39.306	ENSLBEG00000026930	rab6ba	79	39.306
ENSLBEG00000027226	-	67	64.968	ENSLBEG00000001618	rab35b	78	64.968
ENSLBEG00000027226	-	73	46.552	ENSLBEG00000013756	rab12	72	44.828
ENSLBEG00000027226	-	77	33.503	ENSLBEG00000015149	-	91	33.503
ENSLBEG00000027226	-	71	49.701	ENSLBEG00000020796	rab2a	93	47.727
ENSLBEG00000027226	-	66	36.025	ENSLBEG00000003644	rabl2	68	36.025
ENSLBEG00000027226	-	74	44.253	ENSLBEG00000002516	rab5aa	77	44.253
ENSLBEG00000027226	-	67	35.443	ENSLBEG00000013176	rab23	83	35.294
ENSLBEG00000027226	-	69	44.172	ENSLBEG00000010408	-	85	42.553
ENSLBEG00000027226	-	77	40.299	ENSLBEG00000026790	-	93	40.299
ENSLBEG00000027226	-	66	38.750	ENSLBEG00000020582	rab9a	79	38.750
ENSLBEG00000027226	-	70	34.118	ENSLBEG00000018812	RAB29	84	34.969
ENSLBEG00000027226	-	73	45.930	ENSLBEG00000002367	rab25a	95	40.284
ENSLBEG00000027226	-	73	51.462	ENSLBEG00000026857	rab11a	80	51.462
ENSLBEG00000027226	-	70	40.237	ENSLBEG00000017798	-	82	40.237
ENSLBEG00000027226	-	69	44.848	ENSLBEG00000001313	RAB39B	77	44.848
ENSLBEG00000027226	-	82	75.385	ENSLBEG00000027781	rab1ab	96	75.385
ENSLBEG00000027226	-	69	35.583	ENSLBEG00000001905	hrasb	86	35.583
ENSLBEG00000027226	-	50	30.328	ENSLBEG00000027205	-	63	30.328
ENSLBEG00000027226	-	52	44.167	ENSLBEG00000027819	rab34b	60	44.167
ENSLBEG00000027226	-	89	43.541	ENSLBEG00000015248	rab11bb	95	43.541
ENSLBEG00000027226	-	73	48.538	ENSLBEG00000004172	-	95	43.062
ENSLBEG00000027226	-	80	32.124	ENSLBEG00000027628	si:cabz01085950.1	92	32.124
ENSLBEG00000027226	-	70	37.714	ENSLBEG00000005018	rab32b	81	37.714
ENSLBEG00000027226	-	68	50.311	ENSLBEG00000019428	rab18b	79	50.311
ENSLBEG00000027226	-	67	45.732	ENSLBEG00000025798	zgc:101559	70	45.732
ENSLBEG00000027226	-	89	43.541	ENSLBEG00000016417	rab11al	95	43.541
ENSLBEG00000027226	-	72	43.860	ENSLBEG00000022630	-	80	43.860
ENSLBEG00000027226	-	63	40.645	ENSLBEG00000018063	-	64	40.645
ENSLBEG00000027226	-	69	44.048	ENSLBEG00000026777	rab33ba	73	44.048
ENSLBEG00000027226	-	80	51.596	ENSLBEG00000026779	rab13	98	51.531
ENSLBEG00000027226	-	70	49.390	ENSLBEG00000026989	RAB15	77	49.390
ENSLBEG00000027226	-	69	34.356	ENSLBEG00000003132	rras	81	34.356
ENSLBEG00000027226	-	73	49.708	ENSLBEG00000006087	rab11ba	79	49.708
ENSLBEG00000027226	-	69	44.785	ENSLBEG00000004128	rab5c	80	43.503
ENSLBEG00000027226	-	73	32.000	ENSLBEG00000027691	RAB17	76	32.000
ENSLBEG00000027226	-	87	35.681	ENSLBEG00000026006	rab34a	77	35.681
ENSLBEG00000027226	-	70	53.049	ENSLBEG00000001146	rab30	81	53.049
ENSLBEG00000027226	-	89	38.426	ENSLBEG00000002926	si:dkey-34d22.5	97	38.605
ENSLBEG00000027226	-	68	50.932	ENSLBEG00000005861	rab18a	76	50.932
ENSLBEG00000027226	-	52	32.231	ENSLBEG00000011152	arl4d	59	31.933
ENSLBEG00000027226	-	70	40.237	ENSLBEG00000001796	RAB7A	82	40.237
ENSLBEG00000027226	-	68	44.444	ENSLBEG00000027539	-	74	44.444
ENSLBEG00000027226	-	79	30.000	ENSLBEG00000016218	rasl11a	75	30.000
ENSLBEG00000027226	-	77	31.868	ENSLBEG00000014885	rheb	93	31.868
ENSLBEG00000027226	-	70	34.118	ENSLBEG00000006152	-	85	34.911
ENSLBEG00000027226	-	51	30.081	ENSLBEG00000023263	-	62	30.081
ENSLBEG00000027226	-	72	33.918	ENSLBEG00000025705	si:ch73-116o1.2	80	34.524

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027226	-	89	90.909	ENSAPOG00000004980	-	98	90.909	Acanthochromis_polyacanthus
ENSLBEG00000027226	-	89	89.952	ENSACIG00000009006	zgc:171927	98	89.952	Amphilophus_citrinellus
ENSLBEG00000027226	-	89	89.952	ENSAOCG00000024149	-	98	89.952	Amphiprion_ocellaris
ENSLBEG00000027226	-	57	94.656	ENSAOCG00000013808	-	95	96.748	Amphiprion_ocellaris
ENSLBEG00000027226	-	93	87.558	ENSAPEG00000022171	zgc:171927	96	90.431	Amphiprion_percula
ENSLBEG00000027226	-	89	90.431	ENSATEG00000003430	zgc:171927	98	90.431	Anabas_testudineus
ENSLBEG00000027226	-	89	90.431	ENSACLG00000013734	-	98	90.431	Astatotilapia_calliptera
ENSLBEG00000027226	-	89	77.990	ENSAMXG00000039486	zgc:171927	98	78.095	Astyanax_mexicanus
ENSLBEG00000027226	-	89	88.038	ENSCSEG00000014416	zgc:171927	98	88.038	Cynoglossus_semilaevis
ENSLBEG00000027226	-	89	88.995	ENSCVAG00000009222	zgc:171927	98	88.995	Cyprinodon_variegatus
ENSLBEG00000027226	-	89	77.619	ENSDARG00000033056	zgc:171927	98	77.619	Danio_rerio
ENSLBEG00000027226	-	89	78.673	ENSELUG00000011680	zgc:171927	98	78.673	Esox_lucius
ENSLBEG00000027226	-	89	88.995	ENSFHEG00000022176	zgc:171927	98	88.995	Fundulus_heteroclitus
ENSLBEG00000027226	-	92	77.064	ENSGMOG00000004979	-	97	77.830	Gadus_morhua
ENSLBEG00000027226	-	91	89.252	ENSGAFG00000015702	zgc:171927	84	90.000	Gambusia_affinis
ENSLBEG00000027226	-	93	89.450	ENSGACG00000013401	zgc:171927	96	90.431	Gasterosteus_aculeatus
ENSLBEG00000027226	-	89	90.431	ENSHBUG00000002397	-	98	90.431	Haplochromis_burtoni
ENSLBEG00000027226	-	89	89.952	ENSKMAG00000009856	zgc:171927	98	89.952	Kryptolebias_marmoratus
ENSLBEG00000027226	-	90	73.585	ENSLOCG00000014692	zgc:171927	97	73.585	Lepisosteus_oculatus
ENSLBEG00000027226	-	89	88.038	ENSMAMG00000020135	zgc:171927	98	88.038	Mastacembelus_armatus
ENSLBEG00000027226	-	89	90.431	ENSMZEG00005024685	-	98	90.431	Maylandia_zebra
ENSLBEG00000027226	-	89	84.689	ENSMMOG00000009833	-	98	84.689	Mola_mola
ENSLBEG00000027226	-	89	86.124	ENSMALG00000021129	zgc:171927	98	86.124	Monopterus_albus
ENSLBEG00000027226	-	89	90.909	ENSNBRG00000006202	zgc:171927	98	90.909	Neolamprologus_brichardi
ENSLBEG00000027226	-	89	87.560	ENSORLG00000000602	zgc:171927	98	87.560	Oryzias_latipes
ENSLBEG00000027226	-	89	87.560	ENSORLG00020021071	zgc:171927	98	87.560	Oryzias_latipes_hni
ENSLBEG00000027226	-	89	88.038	ENSORLG00015010098	zgc:171927	98	88.038	Oryzias_latipes_hsok
ENSLBEG00000027226	-	89	88.517	ENSOMEG00000020594	zgc:171927	98	88.517	Oryzias_melastigma
ENSLBEG00000027226	-	89	90.431	ENSPFOG00000013810	zgc:171927	96	90.431	Poecilia_formosa
ENSLBEG00000027226	-	89	89.474	ENSPLAG00000005869	zgc:171927	98	89.474	Poecilia_latipinna
ENSLBEG00000027226	-	89	90.431	ENSPMEG00000022350	zgc:171927	98	90.431	Poecilia_mexicana
ENSLBEG00000027226	-	89	90.431	ENSPREG00000017517	zgc:171927	98	90.431	Poecilia_reticulata
ENSLBEG00000027226	-	89	90.431	ENSPNYG00000007520	-	98	90.431	Pundamilia_nyererei
ENSLBEG00000027226	-	89	78.469	ENSPNAG00000029574	zgc:171927	98	78.571	Pygocentrus_nattereri
ENSLBEG00000027226	-	89	77.143	ENSSFOG00015005464	zgc:171927	96	77.143	Scleropages_formosus
ENSLBEG00000027226	-	89	87.560	ENSSMAG00000004416	-	98	87.560	Scophthalmus_maximus
ENSLBEG00000027226	-	89	90.909	ENSSDUG00000004445	zgc:171927	98	90.909	Seriola_dumerili
ENSLBEG00000027226	-	89	90.909	ENSSLDG00000018024	zgc:171927	98	90.909	Seriola_lalandi_dorsalis
ENSLBEG00000027226	-	89	91.866	ENSSPAG00000013533	zgc:171927	98	91.866	Stegastes_partitus
ENSLBEG00000027226	-	89	90.431	ENSXCOG00000010695	zgc:171927	98	90.431	Xiphophorus_couchianus
ENSLBEG00000027226	-	89	89.952	ENSXMAG00000004683	zgc:171927	98	89.952	Xiphophorus_maculatus