EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000027266 (Gene tree)
Gene ID
109987466
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
13336 bases
Position
chrFKLU01000118.1:1273065-1286400
Accession
109987466
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000036442RRM_1PF00076.222.7e-1711
ENSLBEP00000036434RRM_1PF00076.224.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000037961-1336XM_020638549ENSLBEP00000036434284 (aa)XP_020494205UPI0009B4DDAD
ENSLBET00000037969-1015XM_020638550ENSLBEP00000036442232 (aa)XP_020494206UPI00054C6F57
Gene Model
Click here to download ENSLBEG00000027266's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027266's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000027266pabpn16360.784ENSLBEG00000011647PABPN1L6857.949
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000027266pabpn19972.532ENSG00000258643BCL2L2-PABPN17072.532Homo_sapiens
ENSLBEG00000027266pabpn18682.524ENSG00000100836PABPN19482.143Homo_sapiens
ENSLBEG00000027266pabpn110099.569ENSAPOG00000016425pabpn110099.569Acanthochromis_polyacanthus
ENSLBEG00000027266pabpn18184.211ENSAMEG00000007048BCL2L2-PABPN110084.211Ailuropoda_melanoleuca
ENSLBEG00000027266pabpn110097.203ENSACIG00000021744pabpn110098.864Amphilophus_citrinellus
ENSLBEG00000027266pabpn110099.569ENSAOCG00000015805pabpn110099.569Amphiprion_ocellaris
ENSLBEG00000027266pabpn110099.569ENSAPEG00000009623pabpn110099.569Amphiprion_percula
ENSLBEG00000027266pabpn1100100.000ENSATEG00000020531pabpn1100100.000Anabas_testudineus
ENSLBEG00000027266pabpn18185.789ENSACAG00000006185-8172.917Anolis_carolinensis
ENSLBEG00000027266pabpn18483.838ENSANAG00000024513-8476.033Aotus_nancymaae
ENSLBEG00000027266pabpn110096.864ENSACLG00000016374pabpn110096.864Astatotilapia_calliptera
ENSLBEG00000027266pabpn110097.425ENSAMXG00000000452pabpn110097.425Astyanax_mexicanus
ENSLBEG00000027266pabpn18182.812ENSBTAG00000053753-7182.812Bos_taurus
ENSLBEG00000027266pabpn18483.838ENSBTAG00000006884PABPN18669.697Bos_taurus
ENSLBEG00000027266pabpn18476.531ENSBTAG00000050594-7679.798Bos_taurus
ENSLBEG00000027266pabpn16258.904WBGene00003904pabp-28655.000Caenorhabditis_elegans
ENSLBEG00000027266pabpn17180.357ENSCJAG00000004407-8480.357Callithrix_jacchus
ENSLBEG00000027266pabpn19975.966ENSCJAG00000007960-8476.395Callithrix_jacchus
ENSLBEG00000027266pabpn18682.524ENSCAFG00000011482PABPN18671.212Canis_familiaris
ENSLBEG00000027266pabpn18682.524ENSCAFG00020006651-8670.833Canis_lupus_dingo
ENSLBEG00000027266pabpn18682.524ENSCAFG00020007298-8670.833Canis_lupus_dingo
ENSLBEG00000027266pabpn18682.524ENSCHIG00000012184PABPN18670.833Capra_hircus
ENSLBEG00000027266pabpn19972.532ENSTSYG00000033996BCL2L2-PABPN19482.143Carlito_syrichta
ENSLBEG00000027266pabpn15982.014ENSCAPG00000009461-9982.014Cavia_aperea
ENSLBEG00000027266pabpn18682.039ENSCPOG00000025574PABPN16881.818Cavia_porcellus
ENSLBEG00000027266pabpn19975.966ENSCCAG00000033954BCL2L2-PABPN18476.395Cebus_capucinus
ENSLBEG00000027266pabpn19975.966ENSCATG00000038536BCL2L2-PABPN18476.395Cercocebus_atys
ENSLBEG00000027266pabpn16582.119ENSCLAG00000012423PABPN15682.119Chinchilla_lanigera
ENSLBEG00000027266pabpn18681.068ENSCSAG00000016036PABPN18669.697Chlorocebus_sabaeus
ENSLBEG00000027266pabpn18972.857ENSCHOG00000004798BCL2L2-PABPN19270.909Choloepus_hoffmanni
ENSLBEG00000027266pabpn17184.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSLBEG00000027266pabpn19062.559ENSCING00000012468-8962.085Ciona_intestinalis
ENSLBEG00000027266pabpn17664.045ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSLBEG00000027266pabpn18571.212ENSCANG00000030980-8764.286Colobus_angolensis_palliatus
ENSLBEG00000027266pabpn19972.532ENSCANG00000009750BCL2L2-PABPN19482.143Colobus_angolensis_palliatus
ENSLBEG00000027266pabpn18682.039ENSCGRG00001019696Pabpn19481.548Cricetulus_griseus_chok1gshd
ENSLBEG00000027266pabpn16391.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSLBEG00000027266pabpn110097.845ENSCSEG00000008774pabpn110097.845Cynoglossus_semilaevis
ENSLBEG00000027266pabpn110094.017ENSCVAG00000003152pabpn110095.299Cyprinodon_variegatus
ENSLBEG00000027266pabpn110097.414ENSDARG00000045373pabpn110097.414Danio_rerio
ENSLBEG00000027266pabpn18153.476ENSDARG00000087996pabpn1l8659.184Danio_rerio
ENSLBEG00000027266pabpn18682.524ENSDNOG00000023682PABPN18670.833Dasypus_novemcinctus
ENSLBEG00000027266pabpn18681.553ENSDORG00000028966-8669.697Dipodomys_ordii
ENSLBEG00000027266pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSLBEG00000027266pabpn110057.983FBgn0005648Pabp29758.333Drosophila_melanogaster
ENSLBEG00000027266pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSLBEG00000027266pabpn18682.524ENSEASG00005011716PABPN18670.833Equus_asinus_asinus
ENSLBEG00000027266pabpn18581.863ENSECAG00000011652PABPN18570.356Equus_caballus
ENSLBEG00000027266pabpn18680.097ENSEEUG00000012973-6978.325Erinaceus_europaeus
ENSLBEG00000027266pabpn110094.937ENSELUG00000022654pabpn110094.937Esox_lucius
ENSLBEG00000027266pabpn18682.524ENSFCAG00000031922PABPN18670.833Felis_catus
ENSLBEG00000027266pabpn17182.143ENSFDAG00000018381BCL2L2-PABPN19482.143Fukomys_damarensis
ENSLBEG00000027266pabpn110095.690ENSFHEG00000007215pabpn110095.690Fundulus_heteroclitus
ENSLBEG00000027266pabpn110096.140ENSGMOG00000003922pabpn110096.140Gadus_morhua
ENSLBEG00000027266pabpn18382.828ENSGALG00000052930-6182.938Gallus_gallus
ENSLBEG00000027266pabpn110097.863ENSGAFG00000017099pabpn110097.863Gambusia_affinis
ENSLBEG00000027266pabpn110098.592ENSGACG00000002167pabpn110098.592Gasterosteus_aculeatus
ENSLBEG00000027266pabpn18969.712ENSGGOG00000039675-9165.833Gorilla_gorilla
ENSLBEG00000027266pabpn19975.966ENSGGOG00000022683-8476.395Gorilla_gorilla
ENSLBEG00000027266pabpn19466.239ENSGGOG00000025919-9869.128Gorilla_gorilla
ENSLBEG00000027266pabpn110099.138ENSHBUG00000019523pabpn110099.138Haplochromis_burtoni
ENSLBEG00000027266pabpn18682.039ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSLBEG00000027266pabpn18770.048ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSLBEG00000027266pabpn17163.473ENSHGLG00000009842-9363.473Heterocephalus_glaber_female
ENSLBEG00000027266pabpn19471.493ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSLBEG00000027266pabpn17170.060ENSHGLG00100018935-9472.674Heterocephalus_glaber_male
ENSLBEG00000027266pabpn18770.048ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSLBEG00000027266pabpn110097.845ENSHCOG00000004655pabpn110097.845Hippocampus_comes
ENSLBEG00000027266pabpn110089.655ENSIPUG00000000180-9989.655Ictalurus_punctatus
ENSLBEG00000027266pabpn110097.845ENSIPUG00000008085PABPN110097.845Ictalurus_punctatus
ENSLBEG00000027266pabpn17182.143ENSSTOG00000029847BCL2L2-PABPN19482.143Ictidomys_tridecemlineatus
ENSLBEG00000027266pabpn17182.143ENSJJAG00000023507Gm205219482.143Jaculus_jaculus
ENSLBEG00000027266pabpn110097.544ENSKMAG00000018748pabpn110097.544Kryptolebias_marmoratus
ENSLBEG00000027266pabpn17588.764ENSLACG00000000646pabpn18585.052Latimeria_chalumnae
ENSLBEG00000027266pabpn110092.632ENSLOCG00000000796pabpn110092.982Lepisosteus_oculatus
ENSLBEG00000027266pabpn19066.355ENSLOCG00000004694pabpn1l9966.355Lepisosteus_oculatus
ENSLBEG00000027266pabpn16582.781ENSLAFG00000031227-9982.781Loxodonta_africana
ENSLBEG00000027266pabpn19972.532ENSMFAG00000032183BCL2L2-PABPN19482.143Macaca_fascicularis
ENSLBEG00000027266pabpn16174.648ENSMFAG00000031355-9974.648Macaca_fascicularis
ENSLBEG00000027266pabpn19972.532ENSMMUG00000014747BCL2L2-PABPN110082.313Macaca_mulatta
ENSLBEG00000027266pabpn18668.293ENSMMUG00000048382-8958.889Macaca_mulatta
ENSLBEG00000027266pabpn19975.966ENSMNEG00000045065BCL2L2-PABPN18476.395Macaca_nemestrina
ENSLBEG00000027266pabpn17968.984ENSMNEG00000035750-9974.648Macaca_nemestrina
ENSLBEG00000027266pabpn17266.467ENSMLEG00000034623-9972.535Mandrillus_leucophaeus
ENSLBEG00000027266pabpn19972.532ENSMLEG00000043862BCL2L2-PABPN19482.143Mandrillus_leucophaeus
ENSLBEG00000027266pabpn110097.887ENSMAMG00000007979pabpn110097.887Mastacembelus_armatus
ENSLBEG00000027266pabpn110098.592ENSMZEG00005011904pabpn110098.592Maylandia_zebra
ENSLBEG00000027266pabpn19972.532ENSMAUG00000007383Gm205218770.611Mesocricetus_auratus
ENSLBEG00000027266pabpn19976.395ENSMICG00000010002BCL2L2-PABPN18477.119Microcebus_murinus
ENSLBEG00000027266pabpn19972.103ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSLBEG00000027266pabpn110099.569ENSMMOG00000005405pabpn110099.569Mola_mola
ENSLBEG00000027266pabpn18579.208ENSMODG00000004535-8269.841Monodelphis_domestica
ENSLBEG00000027266pabpn110098.944ENSMALG00000019612pabpn110098.944Monopterus_albus
ENSLBEG00000027266pabpn18681.068MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSLBEG00000027266pabpn19971.674MGP_CAROLIEiJ_G0019276Gm205217071.674Mus_caroli
ENSLBEG00000027266pabpn18681.553ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSLBEG00000027266pabpn19972.103ENSMUSG00000092232Gm205217072.103Mus_musculus
ENSLBEG00000027266pabpn18681.553MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSLBEG00000027266pabpn19972.103MGP_PahariEiJ_G0030294Gm205217072.103Mus_pahari
ENSLBEG00000027266pabpn19972.103MGP_SPRETEiJ_G0020165Gm205217072.103Mus_spretus
ENSLBEG00000027266pabpn18681.553MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSLBEG00000027266pabpn16682.051ENSMPUG00000006775-9282.051Mustela_putorius_furo
ENSLBEG00000027266pabpn18481.313ENSMLUG00000028677-8573.305Myotis_lucifugus
ENSLBEG00000027266pabpn18183.158ENSMLUG00000003800-10083.158Myotis_lucifugus
ENSLBEG00000027266pabpn18879.524ENSMLUG00000012452-8271.032Myotis_lucifugus
ENSLBEG00000027266pabpn19972.961ENSNGAG00000019529Gm205217072.961Nannospalax_galili
ENSLBEG00000027266pabpn110098.944ENSNBRG00000023955pabpn110098.944Neolamprologus_brichardi
ENSLBEG00000027266pabpn19972.532ENSNLEG00000015007-7482.297Nomascus_leucogenys
ENSLBEG00000027266pabpn16460.811ENSNLEG00000035292-9960.811Nomascus_leucogenys
ENSLBEG00000027266pabpn18669.268ENSNLEG00000030598-7770.526Nomascus_leucogenys
ENSLBEG00000027266pabpn18674.384ENSODEG00000003739-8862.646Octodon_degus
ENSLBEG00000027266pabpn19972.103ENSODEG00000002083BCL2L2-PABPN16881.818Octodon_degus
ENSLBEG00000027266pabpn17672.626ENSODEG00000011555-8971.429Octodon_degus
ENSLBEG00000027266pabpn110098.944ENSONIG00000008112pabpn110098.944Oreochromis_niloticus
ENSLBEG00000027266pabpn16384.354ENSOANG00000009218-10084.354Ornithorhynchus_anatinus
ENSLBEG00000027266pabpn18682.039ENSOCUG00000016174PABPN19570.611Oryctolagus_cuniculus
ENSLBEG00000027266pabpn110097.887ENSORLG00000027900pabpn110097.887Oryzias_latipes
ENSLBEG00000027266pabpn19998.253ENSORLG00020004681pabpn110095.205Oryzias_latipes_hni
ENSLBEG00000027266pabpn110098.707ENSORLG00015000018pabpn110098.707Oryzias_latipes_hsok
ENSLBEG00000027266pabpn110098.592ENSOMEG00000016618pabpn110098.592Oryzias_melastigma
ENSLBEG00000027266pabpn18682.524ENSOGAG00000008710PABPN18670.833Otolemur_garnettii
ENSLBEG00000027266pabpn19972.532ENSOARG00000019336BCL2L2-PABPN16472.532Ovis_aries
ENSLBEG00000027266pabpn19972.532ENSPPAG00000028984BCL2L2-PABPN19282.051Pan_paniscus
ENSLBEG00000027266pabpn17167.470ENSPPAG00000039421-9367.470Pan_paniscus
ENSLBEG00000027266pabpn18682.524ENSPPRG00000010567PABPN18670.833Panthera_pardus
ENSLBEG00000027266pabpn17182.143ENSPTIG00000001063BCL2L2-PABPN19482.143Panthera_tigris_altaica
ENSLBEG00000027266pabpn110063.248ENSPTRG00000047273-9360.714Pan_troglodytes
ENSLBEG00000027266pabpn19975.966ENSPTRG00000006167BCL2L28476.395Pan_troglodytes
ENSLBEG00000027266pabpn19975.966ENSPANG00000021100BCL2L2-PABPN18476.395Papio_anubis
ENSLBEG00000027266pabpn18469.697ENSPANG00000023326-9975.352Papio_anubis
ENSLBEG00000027266pabpn110092.275ENSPKIG00000018052pabpn110095.708Paramormyrops_kingsleyae
ENSLBEG00000027266pabpn110096.127ENSPKIG00000008144-10096.127Paramormyrops_kingsleyae
ENSLBEG00000027266pabpn17169.512ENSPKIG00000008340pabpn1l8667.039Paramormyrops_kingsleyae
ENSLBEG00000027266pabpn15876.866ENSPSIG00000011959-9477.444Pelodiscus_sinensis
ENSLBEG00000027266pabpn110093.662ENSPMGG00000022027pabpn110093.662Periophthalmus_magnuspinnatus
ENSLBEG00000027266pabpn19972.532ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSLBEG00000027266pabpn17975.806ENSPMAG00000006212pabpn19965.041Petromyzon_marinus
ENSLBEG00000027266pabpn18680.000ENSPCIG00000027751-8670.455Phascolarctos_cinereus
ENSLBEG00000027266pabpn110097.436ENSPFOG00000010351pabpn19997.436Poecilia_formosa
ENSLBEG00000027266pabpn110097.203ENSPLAG00000022696pabpn110097.203Poecilia_latipinna
ENSLBEG00000027266pabpn110097.436ENSPMEG00000020856pabpn110097.436Poecilia_mexicana
ENSLBEG00000027266pabpn110097.863ENSPREG00000011278pabpn110097.863Poecilia_reticulata
ENSLBEG00000027266pabpn18182.474ENSPPYG00000005663PABPN18970.238Pongo_abelii
ENSLBEG00000027266pabpn17969.271ENSPCAG00000005902PABPN18460.000Procavia_capensis
ENSLBEG00000027266pabpn19976.395ENSPCOG00000028047BCL2L2-PABPN18477.119Propithecus_coquereli
ENSLBEG00000027266pabpn18880.861ENSPVAG00000005270PABPN18669.582Pteropus_vampyrus
ENSLBEG00000027266pabpn110099.138ENSPNYG00000013182pabpn110099.138Pundamilia_nyererei
ENSLBEG00000027266pabpn18862.319ENSPNAG00000021666pabpn1l9565.641Pygocentrus_nattereri
ENSLBEG00000027266pabpn110098.276ENSPNAG00000023526pabpn110098.276Pygocentrus_nattereri
ENSLBEG00000027266pabpn18682.039ENSRNOG00000042195Pabpn18570.611Rattus_norvegicus
ENSLBEG00000027266pabpn19471.946ENSRBIG00000040762BCL2L2-PABPN16871.946Rhinopithecus_bieti
ENSLBEG00000027266pabpn18871.292ENSRBIG00000042811-9567.401Rhinopithecus_bieti
ENSLBEG00000027266pabpn18971.698ENSRBIG00000039547-8266.518Rhinopithecus_bieti
ENSLBEG00000027266pabpn19466.964ENSRROG00000040409-8266.964Rhinopithecus_roxellana
ENSLBEG00000027266pabpn18867.773ENSRROG00000036409-7064.629Rhinopithecus_roxellana
ENSLBEG00000027266pabpn19471.946ENSRROG00000045535BCL2L2-PABPN19482.143Rhinopithecus_roxellana
ENSLBEG00000027266pabpn19968.699ENSSBOG00000026930BCL2L2-PABPN19282.051Saimiri_boliviensis_boliviensis
ENSLBEG00000027266pabpn18181.481ENSSHAG00000014841-8783.684Sarcophilus_harrisii
ENSLBEG00000027266pabpn19962.185ENSSHAG00000007707-9958.824Sarcophilus_harrisii
ENSLBEG00000027266pabpn16173.944ENSSFOG00015015833pabpn1l8466.120Scleropages_formosus
ENSLBEG00000027266pabpn110090.558ENSSFOG00015012565pabpn110090.558Scleropages_formosus
ENSLBEG00000027266pabpn110096.983ENSSFOG00015014718pabpn110096.983Scleropages_formosus
ENSLBEG00000027266pabpn110099.569ENSSMAG00000020157pabpn110099.569Scophthalmus_maximus
ENSLBEG00000027266pabpn110099.296ENSSDUG00000020582pabpn110099.296Seriola_dumerili
ENSLBEG00000027266pabpn1100100.000ENSSLDG00000007118pabpn1100100.000Seriola_lalandi_dorsalis
ENSLBEG00000027266pabpn17184.524ENSSPUG00000018308-9484.524Sphenodon_punctatus
ENSLBEG00000027266pabpn110098.283ENSSPAG00000021658pabpn110098.283Stegastes_partitus
ENSLBEG00000027266pabpn19262.963ENSSSCG00000034805-7959.048Sus_scrofa
ENSLBEG00000027266pabpn19972.532ENSSSCG00000002023PABPN18670.833Sus_scrofa
ENSLBEG00000027266pabpn110098.276ENSTRUG00000023664pabpn110098.276Takifugu_rubripes
ENSLBEG00000027266pabpn19293.488ENSTNIG00000005369pabpn19398.010Tetraodon_nigroviridis
ENSLBEG00000027266pabpn18682.524ENSUAMG00000024460PABPN16882.297Ursus_americanus
ENSLBEG00000027266pabpn19972.532ENSUMAG00000014288BCL2L2-PABPN17072.532Ursus_maritimus
ENSLBEG00000027266pabpn19972.532ENSVVUG00000019912BCL2L2-PABPN17682.990Vulpes_vulpes
ENSLBEG00000027266pabpn18486.224ENSXETG00000014597pabpn17382.870Xenopus_tropicalis
ENSLBEG00000027266pabpn17586.286ENSXCOG00000005158pabpn19886.286Xiphophorus_couchianus
ENSLBEG00000027266pabpn110098.291ENSXMAG00000006196pabpn110098.291Xiphophorus_maculatus

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