EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000027323 (Gene tree)
Gene ID: 109988897
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 9505 bases
Position: chrFKLU01000006.1:1913405-1922909
Accession: 109988897
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036535	KH_1	PF00013.29	1.3e-15	1	1
ENSLBEP00000036522	KH_1	PF00013.29	1.4e-15	1	1
ENSLBEP00000036535	TUDOR	PF00567.24	1.9e-25	1	1
ENSLBEP00000036522	TUDOR	PF00567.24	2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038064	-	2444	-	ENSLBEP00000036535	558 (aa)	-	-
ENSLBET00000038050	-	2540	XM_020640503	ENSLBEP00000036522	570 (aa)	XP_020496159	-

Gene Model

Click here to download ENSLBEG00000027323's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027323's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027323	tdrkh	99	78.910	ENSAPOG00000012653	tdrkh	100	79.928	Acanthochromis_polyacanthus
ENSLBEG00000027323	tdrkh	96	75.651	ENSACIG00000010318	tdrkh	99	75.651	Amphilophus_citrinellus
ENSLBEG00000027323	tdrkh	97	79.928	ENSAOCG00000020623	tdrkh	100	81.004	Amphiprion_ocellaris
ENSLBEG00000027323	tdrkh	97	79.570	ENSAPEG00000018388	tdrkh	100	80.824	Amphiprion_percula
ENSLBEG00000027323	tdrkh	99	79.682	ENSATEG00000023809	tdrkh	100	79.820	Anabas_testudineus
ENSLBEG00000027323	tdrkh	97	74.595	ENSACLG00000003017	tdrkh	100	74.595	Astatotilapia_calliptera
ENSLBEG00000027323	tdrkh	99	59.130	ENSAMXG00000011664	tdrkh	96	59.130	Astyanax_mexicanus
ENSLBEG00000027323	tdrkh	98	68.739	ENSCSEG00000002894	tdrkh	100	68.739	Cynoglossus_semilaevis
ENSLBEG00000027323	tdrkh	59	81.373	ENSCVAG00000020347	tdrkh	77	81.373	Cyprinodon_variegatus
ENSLBEG00000027323	tdrkh	99	59.107	ENSDARG00000053474	tdrkh	96	59.107	Danio_rerio
ENSLBEG00000027323	tdrkh	99	64.716	ENSELUG00000024537	tdrkh	96	64.716	Esox_lucius
ENSLBEG00000027323	tdrkh	97	74.955	ENSFHEG00000003544	tdrkh	100	74.955	Fundulus_heteroclitus
ENSLBEG00000027323	tdrkh	99	61.905	ENSGMOG00000009304	tdrkh	96	61.905	Gadus_morhua
ENSLBEG00000027323	tdrkh	97	71.171	ENSGAFG00000010754	tdrkh	100	71.171	Gambusia_affinis
ENSLBEG00000027323	tdrkh	99	72.456	ENSGACG00000015258	tdrkh	96	72.456	Gasterosteus_aculeatus
ENSLBEG00000027323	tdrkh	97	74.595	ENSHBUG00000017609	tdrkh	100	74.595	Haplochromis_burtoni
ENSLBEG00000027323	tdrkh	97	59.107	ENSIPUG00000009673	tdrkh	99	59.107	Ictalurus_punctatus
ENSLBEG00000027323	tdrkh	99	72.522	ENSKMAG00000016638	tdrkh	96	72.522	Kryptolebias_marmoratus
ENSLBEG00000027323	tdrkh	99	50.685	ENSLOCG00000011381	tdrkh	97	51.515	Lepisosteus_oculatus
ENSLBEG00000027323	tdrkh	97	77.477	ENSMAMG00000020343	tdrkh	100	77.477	Mastacembelus_armatus
ENSLBEG00000027323	tdrkh	97	74.595	ENSMZEG00005006755	tdrkh	100	74.595	Maylandia_zebra
ENSLBEG00000027323	tdrkh	96	75.137	ENSMMOG00000020663	tdrkh	91	75.137	Mola_mola
ENSLBEG00000027323	tdrkh	97	76.302	ENSMALG00000015401	tdrkh	100	76.302	Monopterus_albus
ENSLBEG00000027323	tdrkh	97	71.712	ENSNBRG00000023815	tdrkh	100	71.712	Neolamprologus_brichardi
ENSLBEG00000027323	tdrkh	97	71.351	ENSORLG00000029204	tdrkh	99	71.351	Oryzias_latipes
ENSLBEG00000027323	tdrkh	95	69.361	ENSORLG00020016168	tdrkh	99	69.361	Oryzias_latipes_hni
ENSLBEG00000027323	tdrkh	96	69.517	ENSORLG00015014094	tdrkh	96	69.646	Oryzias_latipes_hsok
ENSLBEG00000027323	tdrkh	97	71.892	ENSOMEG00000015063	tdrkh	92	71.892	Oryzias_melastigma
ENSLBEG00000027323	tdrkh	100	55.786	ENSPKIG00000017597	tdrkh	100	58.645	Paramormyrops_kingsleyae
ENSLBEG00000027323	tdrkh	96	68.402	ENSPMGG00000019362	tdrkh	99	68.402	Periophthalmus_magnuspinnatus
ENSLBEG00000027323	tdrkh	100	70.526	ENSPFOG00000013032	tdrkh	97	70.526	Poecilia_formosa
ENSLBEG00000027323	tdrkh	97	71.892	ENSPLAG00000004193	tdrkh	100	71.892	Poecilia_latipinna
ENSLBEG00000027323	tdrkh	97	71.712	ENSPMEG00000016502	tdrkh	100	71.712	Poecilia_mexicana
ENSLBEG00000027323	tdrkh	99	68.972	ENSPREG00000004213	tdrkh	96	68.972	Poecilia_reticulata
ENSLBEG00000027323	tdrkh	96	74.164	ENSPNYG00000022818	tdrkh	97	74.302	Pundamilia_nyererei
ENSLBEG00000027323	tdrkh	99	58.596	ENSPNAG00000008783	tdrkh	96	58.596	Pygocentrus_nattereri
ENSLBEG00000027323	tdrkh	97	55.300	ENSSFOG00015001048	tdrkh	100	55.993	Scleropages_formosus
ENSLBEG00000027323	tdrkh	97	77.996	ENSSMAG00000001532	tdrkh	100	77.996	Scophthalmus_maximus
ENSLBEG00000027323	tdrkh	97	78.761	ENSSDUG00000013393	tdrkh	100	78.938	Seriola_dumerili
ENSLBEG00000027323	tdrkh	99	78.683	ENSSLDG00000017418	tdrkh	100	78.938	Seriola_lalandi_dorsalis
ENSLBEG00000027323	tdrkh	99	81.019	ENSSPAG00000006435	tdrkh	96	82.074	Stegastes_partitus
ENSLBEG00000027323	tdrkh	96	72.542	ENSTRUG00000006644	tdrkh	97	72.542	Takifugu_rubripes
ENSLBEG00000027323	tdrkh	97	69.176	ENSTNIG00000003157	tdrkh	99	69.176	Tetraodon_nigroviridis
ENSLBEG00000027323	tdrkh	87	79.747	ENSXCOG00000016972	tdrkh	98	85.185	Xiphophorus_couchianus
ENSLBEG00000027323	tdrkh	97	69.009	ENSXMAG00000014756	tdrkh	100	69.009	Xiphophorus_maculatus