EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027388 (Gene tree)
Gene ID: 109988661
Gene Symbol: -
Alias: -
Full Name: RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 292065 bases
Position: chrFKLU01000144.1:643979-936043
Accession: 109988661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036642	RRM_1	PF00076.22	3e-31	1	2
ENSLBEP00000036642	RRM_1	PF00076.22	3e-31	2	2
ENSLBEP00000036623	RRM_1	PF00076.22	3.8e-31	1	2
ENSLBEP00000036623	RRM_1	PF00076.22	3.8e-31	2	2
ENSLBEP00000036612	RRM_1	PF00076.22	5.9e-31	1	2
ENSLBEP00000036612	RRM_1	PF00076.22	5.9e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038152	-	2647	-	ENSLBEP00000036623	448 (aa)	-	-
ENSLBET00000038172	-	2133	XM_020640217	ENSLBEP00000036642	415 (aa)	XP_020495873	UPI0009B4A1F5
ENSLBET00000038141	-	2872	XM_020640216	ENSLBEP00000036612	523 (aa)	XP_020495872	UPI0009B38B5E

Gene Model

Click here to download ENSLBEG00000027388's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027388's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027388	-	52	33.750	ENSLBEG00000026140	celf3b	56	33.750
ENSLBEG00000027388	-	60	75.379	ENSLBEG00000006677	rbms3	97	75.379
ENSLBEG00000027388	-	88	67.568	ENSLBEG00000005787	RBMS1	84	70.710
ENSLBEG00000027388	-	76	60.815	ENSLBEG00000025962	rbms1a	87	59.104
ENSLBEG00000027388	-	78	75.841	ENSLBEG00000010843	rbms2b	77	85.030
ENSLBEG00000027388	-	87	73.077	ENSLBEG00000017716	rbms2a	89	76.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027388	-	99	87.828	ENSG00000144642	RBMS3	100	89.773	Homo_sapiens
ENSLBEG00000027388	-	99	73.684	ENSAPOG00000007266	rbms3	96	80.402	Acanthochromis_polyacanthus
ENSLBEG00000027388	-	100	98.317	ENSAPOG00000003432	-	100	98.317	Acanthochromis_polyacanthus
ENSLBEG00000027388	-	68	83.444	ENSAMEG00000005947	RBMS3	99	83.444	Ailuropoda_melanoleuca
ENSLBEG00000027388	-	87	73.973	ENSACIG00000021113	RBMS3	95	73.699	Amphilophus_citrinellus
ENSLBEG00000027388	-	78	96.319	ENSACIG00000006987	-	88	97.819	Amphilophus_citrinellus
ENSLBEG00000027388	-	99	81.882	ENSAOCG00000021274	rbms3	99	81.412	Amphiprion_ocellaris
ENSLBEG00000027388	-	100	98.210	ENSAOCG00000024104	-	100	98.210	Amphiprion_ocellaris
ENSLBEG00000027388	-	82	83.523	ENSAPEG00000016299	rbms3	87	86.747	Amphiprion_percula
ENSLBEG00000027388	-	100	91.084	ENSAPEG00000009481	-	100	91.084	Amphiprion_percula
ENSLBEG00000027388	-	99	82.506	ENSATEG00000024295	rbms3	99	82.506	Anabas_testudineus
ENSLBEG00000027388	-	100	98.077	ENSATEG00000008433	-	100	98.077	Anabas_testudineus
ENSLBEG00000027388	-	99	85.615	ENSAPLG00000012270	RBMS3	99	84.919	Anas_platyrhynchos
ENSLBEG00000027388	-	99	88.038	ENSACAG00000028664	RBMS3	99	88.038	Anolis_carolinensis
ENSLBEG00000027388	-	99	85.185	ENSANAG00000021899	RBMS3	99	85.185	Aotus_nancymaae
ENSLBEG00000027388	-	98	97.067	ENSACLG00000008976	-	100	88.447	Astatotilapia_calliptera
ENSLBEG00000027388	-	99	81.754	ENSACLG00000018506	rbms3	99	81.517	Astatotilapia_calliptera
ENSLBEG00000027388	-	99	90.799	ENSAMXG00000020388	rbms3	99	90.799	Astyanax_mexicanus
ENSLBEG00000027388	-	62	86.822	ENSAMXG00000043770	-	100	86.822	Astyanax_mexicanus
ENSLBEG00000027388	-	99	87.828	ENSBTAG00000044062	RBMS3	99	87.828	Bos_taurus
ENSLBEG00000027388	-	99	85.185	ENSCJAG00000004312	RBMS3	99	85.185	Callithrix_jacchus
ENSLBEG00000027388	-	99	84.598	ENSCAFG00000005464	RBMS3	99	84.598	Canis_familiaris
ENSLBEG00000027388	-	99	84.598	ENSCAFG00020024980	RBMS3	99	84.598	Canis_lupus_dingo
ENSLBEG00000027388	-	99	87.351	ENSCHIG00000009144	RBMS3	99	87.351	Capra_hircus
ENSLBEG00000027388	-	76	85.106	ENSTSYG00000002615	RBMS3	99	85.106	Carlito_syrichta
ENSLBEG00000027388	-	87	83.471	ENSCAPG00000017783	RBMS3	95	82.749	Cavia_aperea
ENSLBEG00000027388	-	99	88.164	ENSCPOG00000006457	RBMS3	99	88.164	Cavia_porcellus
ENSLBEG00000027388	-	99	85.185	ENSCCAG00000008671	RBMS3	99	85.185	Cebus_capucinus
ENSLBEG00000027388	-	99	84.954	ENSCATG00000013222	RBMS3	99	84.954	Cercocebus_atys
ENSLBEG00000027388	-	99	87.351	ENSCLAG00000005866	RBMS3	99	87.351	Chinchilla_lanigera
ENSLBEG00000027388	-	64	86.989	ENSCSAG00000009655	RBMS3	98	86.989	Chlorocebus_sabaeus
ENSLBEG00000027388	-	87	88.000	ENSCHOG00000000758	RBMS3	86	88.000	Choloepus_hoffmanni
ENSLBEG00000027388	-	99	88.278	ENSCPBG00000022678	RBMS3	99	88.278	Chrysemys_picta_bellii
ENSLBEG00000027388	-	99	84.954	ENSCANG00000032137	RBMS3	99	84.954	Colobus_angolensis_palliatus
ENSLBEG00000027388	-	99	85.749	ENSCGRG00001007243	Rbms3	99	85.749	Cricetulus_griseus_chok1gshd
ENSLBEG00000027388	-	99	85.749	ENSCGRG00000004599	Rbms3	99	85.749	Cricetulus_griseus_crigri
ENSLBEG00000027388	-	99	82.311	ENSCSEG00000010011	RBMS3	99	81.840	Cynoglossus_semilaevis
ENSLBEG00000027388	-	100	96.875	ENSCSEG00000014677	-	100	96.533	Cynoglossus_semilaevis
ENSLBEG00000027388	-	100	97.602	ENSCVAG00000022814	-	100	97.650	Cyprinodon_variegatus
ENSLBEG00000027388	-	99	83.532	ENSCVAG00000022354	rbms3	99	83.055	Cyprinodon_variegatus
ENSLBEG00000027388	-	99	89.831	ENSDARG00000044574	rbms3	95	94.891	Danio_rerio
ENSLBEG00000027388	-	99	87.112	ENSDNOG00000016645	RBMS3	96	87.112	Dasypus_novemcinctus
ENSLBEG00000027388	-	99	86.874	ENSDORG00000007220	Rbms3	99	86.874	Dipodomys_ordii
ENSLBEG00000027388	-	86	83.333	ENSETEG00000009485	-	80	69.628	Echinops_telfairi
ENSLBEG00000027388	-	67	53.763	ENSEBUG00000005830	rbms3	86	55.056	Eptatretus_burgeri
ENSLBEG00000027388	-	99	87.589	ENSEASG00005006152	RBMS3	99	87.589	Equus_asinus_asinus
ENSLBEG00000027388	-	99	87.589	ENSECAG00000017871	RBMS3	99	87.589	Equus_caballus
ENSLBEG00000027388	-	90	78.788	ENSEEUG00000014337	RBMS3	100	78.788	Erinaceus_europaeus
ENSLBEG00000027388	-	95	81.728	ENSELUG00000002862	rbms3	95	82.412	Esox_lucius
ENSLBEG00000027388	-	91	96.848	ENSELUG00000006905	-	98	97.942	Esox_lucius
ENSLBEG00000027388	-	99	87.351	ENSFCAG00000002130	RBMS3	99	87.351	Felis_catus
ENSLBEG00000027388	-	99	88.517	ENSFALG00000009165	RBMS3	99	88.517	Ficedula_albicollis
ENSLBEG00000027388	-	99	87.351	ENSFDAG00000008278	RBMS3	99	87.351	Fukomys_damarensis
ENSLBEG00000027388	-	95	69.554	ENSFHEG00000004787	RBMS3	94	75.137	Fundulus_heteroclitus
ENSLBEG00000027388	-	90	88.413	ENSGMOG00000002600	-	96	88.413	Gadus_morhua
ENSLBEG00000027388	-	99	88.517	ENSGALG00000011439	RBMS3	99	88.517	Gallus_gallus
ENSLBEG00000027388	-	100	97.842	ENSGAFG00000003329	-	100	97.842	Gambusia_affinis
ENSLBEG00000027388	-	99	83.095	ENSGAFG00000000168	rbms3	99	82.619	Gambusia_affinis
ENSLBEG00000027388	-	65	87.407	ENSGAGG00000004039	RBMS3	99	87.407	Gopherus_agassizii
ENSLBEG00000027388	-	99	85.185	ENSGGOG00000007228	RBMS3	99	85.185	Gorilla_gorilla
ENSLBEG00000027388	-	98	97.067	ENSHBUG00000019785	-	95	97.187	Haplochromis_burtoni
ENSLBEG00000027388	-	63	85.874	ENSHBUG00000021196	rbms3	94	85.874	Haplochromis_burtoni
ENSLBEG00000027388	-	99	87.589	ENSHGLG00000002170	RBMS3	99	87.589	Heterocephalus_glaber_female
ENSLBEG00000027388	-	99	87.589	ENSHGLG00100014278	RBMS3	99	87.589	Heterocephalus_glaber_male
ENSLBEG00000027388	-	100	95.923	ENSHCOG00000007894	-	100	95.923	Hippocampus_comes
ENSLBEG00000027388	-	99	90.799	ENSIPUG00000017680	rbms3	99	90.799	Ictalurus_punctatus
ENSLBEG00000027388	-	99	87.828	ENSSTOG00000006324	RBMS3	99	87.828	Ictidomys_tridecemlineatus
ENSLBEG00000027388	-	99	84.248	ENSJJAG00000014708	Rbms3	99	84.487	Jaculus_jaculus
ENSLBEG00000027388	-	100	97.596	ENSKMAG00000012586	-	100	97.596	Kryptolebias_marmoratus
ENSLBEG00000027388	-	99	80.986	ENSKMAG00000020500	rbms3	99	80.986	Kryptolebias_marmoratus
ENSLBEG00000027388	-	99	90.168	ENSLACG00000010581	RBMS3	99	90.168	Latimeria_chalumnae
ENSLBEG00000027388	-	69	90.972	ENSLOCG00000002328	rbms3	99	90.972	Lepisosteus_oculatus
ENSLBEG00000027388	-	99	84.368	ENSLAFG00000000354	RBMS3	99	84.368	Loxodonta_africana
ENSLBEG00000027388	-	99	87.589	ENSMFAG00000033300	RBMS3	99	87.589	Macaca_fascicularis
ENSLBEG00000027388	-	99	87.589	ENSMMUG00000004404	RBMS3	99	87.589	Macaca_mulatta
ENSLBEG00000027388	-	99	84.954	ENSMNEG00000035839	RBMS3	99	84.954	Macaca_nemestrina
ENSLBEG00000027388	-	99	84.954	ENSMLEG00000029464	RBMS3	99	84.954	Mandrillus_leucophaeus
ENSLBEG00000027388	-	100	97.442	ENSMAMG00000002176	-	100	97.442	Mastacembelus_armatus
ENSLBEG00000027388	-	99	82.783	ENSMAMG00000024043	rbms3	99	83.491	Mastacembelus_armatus
ENSLBEG00000027388	-	98	97.067	ENSMZEG00005026469	-	96	94.614	Maylandia_zebra
ENSLBEG00000027388	-	99	81.754	ENSMZEG00005006308	rbms3	99	81.517	Maylandia_zebra
ENSLBEG00000027388	-	99	85.749	ENSMAUG00000016436	Rbms3	99	85.749	Mesocricetus_auratus
ENSLBEG00000027388	-	99	85.185	ENSMICG00000049249	RBMS3	99	85.185	Microcebus_murinus
ENSLBEG00000027388	-	99	85.507	ENSMOCG00000006997	Rbms3	99	85.507	Microtus_ochrogaster
ENSLBEG00000027388	-	100	96.875	ENSMMOG00000015071	-	100	96.875	Mola_mola
ENSLBEG00000027388	-	82	84.286	ENSMMOG00000008471	RBMS3	89	87.538	Mola_mola
ENSLBEG00000027388	-	99	80.313	ENSMODG00000015125	RBMS3	99	79.642	Monodelphis_domestica
ENSLBEG00000027388	-	99	82.311	ENSMALG00000019536	RBMS3	99	80.142	Monopterus_albus
ENSLBEG00000027388	-	100	97.356	ENSMALG00000009155	-	100	97.356	Monopterus_albus
ENSLBEG00000027388	-	99	84.783	MGP_CAROLIEiJ_G0032783	Rbms3	100	90.338	Mus_caroli
ENSLBEG00000027388	-	99	85.507	ENSMUSG00000039607	Rbms3	100	91.787	Mus_musculus
ENSLBEG00000027388	-	99	85.301	MGP_PahariEiJ_G0015650	Rbms3	100	91.787	Mus_pahari
ENSLBEG00000027388	-	99	85.507	MGP_SPRETEiJ_G0033930	Rbms3	100	91.787	Mus_spretus
ENSLBEG00000027388	-	99	84.598	ENSMPUG00000011956	RBMS3	99	84.598	Mustela_putorius_furo
ENSLBEG00000027388	-	99	87.589	ENSMLUG00000000659	RBMS3	99	87.589	Myotis_lucifugus
ENSLBEG00000027388	-	99	87.681	ENSNGAG00000014039	Rbms3	99	87.681	Nannospalax_galili
ENSLBEG00000027388	-	100	97.115	ENSNBRG00000018065	-	100	97.115	Neolamprologus_brichardi
ENSLBEG00000027388	-	99	85.185	ENSNLEG00000004129	RBMS3	99	85.185	Nomascus_leucogenys
ENSLBEG00000027388	-	99	78.211	ENSMEUG00000004772	RBMS3	99	78.211	Notamacropus_eugenii
ENSLBEG00000027388	-	99	84.491	ENSOPRG00000006808	RBMS3	84	84.491	Ochotona_princeps
ENSLBEG00000027388	-	99	87.828	ENSODEG00000003651	RBMS3	99	87.828	Octodon_degus
ENSLBEG00000027388	-	99	76.429	ENSONIG00000007172	rbms3	99	76.190	Oreochromis_niloticus
ENSLBEG00000027388	-	99	85.517	ENSOANG00000010529	RBMS3	99	85.517	Ornithorhynchus_anatinus
ENSLBEG00000027388	-	99	83.908	ENSOCUG00000004840	RBMS3	99	83.908	Oryctolagus_cuniculus
ENSLBEG00000027388	-	100	97.115	ENSORLG00000002306	-	100	97.115	Oryzias_latipes
ENSLBEG00000027388	-	99	80.952	ENSORLG00000005370	RBMS3	99	80.476	Oryzias_latipes
ENSLBEG00000027388	-	99	80.714	ENSORLG00020022674	RBMS3	99	80.238	Oryzias_latipes_hni
ENSLBEG00000027388	-	100	97.356	ENSORLG00020008496	-	100	97.356	Oryzias_latipes_hni
ENSLBEG00000027388	-	99	81.190	ENSORLG00015005509	rbms3	99	80.714	Oryzias_latipes_hsok
ENSLBEG00000027388	-	100	97.356	ENSORLG00015015719	-	100	97.356	Oryzias_latipes_hsok
ENSLBEG00000027388	-	100	96.931	ENSOMEG00000007677	-	100	96.931	Oryzias_melastigma
ENSLBEG00000027388	-	99	81.667	ENSOMEG00000014805	RBMS3	99	81.190	Oryzias_melastigma
ENSLBEG00000027388	-	99	83.678	ENSOARG00000014684	RBMS3	99	83.678	Ovis_aries
ENSLBEG00000027388	-	99	85.185	ENSPPAG00000036519	RBMS3	99	85.185	Pan_paniscus
ENSLBEG00000027388	-	99	84.491	ENSPPRG00000002761	RBMS3	99	84.491	Panthera_pardus
ENSLBEG00000027388	-	99	87.112	ENSPTIG00000011568	RBMS3	99	87.112	Panthera_tigris_altaica
ENSLBEG00000027388	-	99	87.828	ENSPTRG00000014709	RBMS3	99	87.828	Pan_troglodytes
ENSLBEG00000027388	-	99	84.954	ENSPANG00000010234	RBMS3	99	84.954	Papio_anubis
ENSLBEG00000027388	-	62	92.636	ENSPKIG00000007989	-	100	92.636	Paramormyrops_kingsleyae
ENSLBEG00000027388	-	50	93.269	ENSPKIG00000016025	-	73	93.269	Paramormyrops_kingsleyae
ENSLBEG00000027388	-	99	87.799	ENSPSIG00000005269	RBMS3	99	87.799	Pelodiscus_sinensis
ENSLBEG00000027388	-	92	97.382	ENSPMGG00000021683	-	100	97.382	Periophthalmus_magnuspinnatus
ENSLBEG00000027388	-	82	83.621	ENSPMGG00000021544	rbms3	86	85.843	Periophthalmus_magnuspinnatus
ENSLBEG00000027388	-	99	83.252	ENSPEMG00000001117	Rbms3	99	83.252	Peromyscus_maniculatus_bairdii
ENSLBEG00000027388	-	83	89.459	ENSPCIG00000006106	RBMS3	89	89.720	Phascolarctos_cinereus
ENSLBEG00000027388	-	99	83.571	ENSPFOG00000017887	rbms3	99	83.095	Poecilia_formosa
ENSLBEG00000027388	-	76	81.562	ENSPLAG00000016866	-	82	80.938	Poecilia_latipinna
ENSLBEG00000027388	-	100	97.959	ENSPMEG00000002993	-	100	97.842	Poecilia_mexicana
ENSLBEG00000027388	-	100	97.959	ENSPREG00000018221	-	97	97.959	Poecilia_reticulata
ENSLBEG00000027388	-	100	81.517	ENSPREG00000011880	rbms3	100	81.043	Poecilia_reticulata
ENSLBEG00000027388	-	99	71.494	ENSPPYG00000014050	RBMS3	82	71.494	Pongo_abelii
ENSLBEG00000027388	-	99	65.057	ENSPCAG00000006307	RBMS3	99	65.057	Procavia_capensis
ENSLBEG00000027388	-	99	85.417	ENSPCOG00000017136	RBMS3	99	85.417	Propithecus_coquereli
ENSLBEG00000027388	-	89	88.000	ENSPVAG00000014037	RBMS3	99	75.402	Pteropus_vampyrus
ENSLBEG00000027388	-	100	97.356	ENSPNYG00000012624	-	100	97.356	Pundamilia_nyererei
ENSLBEG00000027388	-	99	81.517	ENSPNYG00000010546	rbms3	99	81.280	Pundamilia_nyererei
ENSLBEG00000027388	-	99	90.799	ENSPNAG00000001800	rbms3	99	90.799	Pygocentrus_nattereri
ENSLBEG00000027388	-	99	85.749	ENSRNOG00000025881	Rbms3	99	85.749	Rattus_norvegicus
ENSLBEG00000027388	-	99	84.722	ENSRBIG00000035863	RBMS3	99	84.722	Rhinopithecus_bieti
ENSLBEG00000027388	-	87	86.243	ENSRROG00000027512	RBMS3	94	85.195	Rhinopithecus_roxellana
ENSLBEG00000027388	-	99	85.185	ENSSBOG00000020232	RBMS3	99	85.185	Saimiri_boliviensis_boliviensis
ENSLBEG00000027388	-	87	83.014	ENSSHAG00000002411	RBMS3	95	81.720	Sarcophilus_harrisii
ENSLBEG00000027388	-	100	94.231	ENSSFOG00015008578	rbms3	100	93.510	Scleropages_formosus
ENSLBEG00000027388	-	98	92.118	ENSSMAG00000020065	-	93	98.396	Scophthalmus_maximus
ENSLBEG00000027388	-	99	79.529	ENSSMAG00000004997	rbms3	99	83.014	Scophthalmus_maximus
ENSLBEG00000027388	-	99	82.547	ENSSDUG00000013656	RBMS3	99	82.311	Seriola_dumerili
ENSLBEG00000027388	-	100	98.317	ENSSDUG00000019287	-	100	98.317	Seriola_dumerili
ENSLBEG00000027388	-	99	82.201	ENSSLDG00000020276	RBMS3	99	81.967	Seriola_lalandi_dorsalis
ENSLBEG00000027388	-	100	98.317	ENSSLDG00000013224	-	100	98.317	Seriola_lalandi_dorsalis
ENSLBEG00000027388	-	78	74.269	ENSSARG00000000695	RBMS3	94	73.352	Sorex_araneus
ENSLBEG00000027388	-	70	85.473	ENSSPUG00000017197	RBMS3	97	85.473	Sphenodon_punctatus
ENSLBEG00000027388	-	100	98.210	ENSSPAG00000003983	-	100	98.210	Stegastes_partitus
ENSLBEG00000027388	-	99	81.882	ENSSPAG00000020693	rbms3	99	81.647	Stegastes_partitus
ENSLBEG00000027388	-	99	87.351	ENSSSCG00000036381	RBMS3	99	87.351	Sus_scrofa
ENSLBEG00000027388	-	76	84.940	ENSTGUG00000003572	RBMS3	99	84.940	Taeniopygia_guttata
ENSLBEG00000027388	-	100	85.986	ENSTRUG00000007482	-	100	86.158	Takifugu_rubripes
ENSLBEG00000027388	-	99	80.189	ENSTRUG00000021719	RBMS3	99	79.717	Takifugu_rubripes
ENSLBEG00000027388	-	78	87.719	ENSTBEG00000005362	RBMS3	94	86.533	Tupaia_belangeri
ENSLBEG00000027388	-	99	83.908	ENSTTRG00000006202	RBMS3	99	83.908	Tursiops_truncatus
ENSLBEG00000027388	-	99	84.598	ENSUMAG00000000263	RBMS3	99	84.598	Ursus_maritimus
ENSLBEG00000027388	-	87	75.789	ENSVPAG00000003842	RBMS3	93	74.227	Vicugna_pacos
ENSLBEG00000027388	-	87	86.089	ENSVVUG00000004660	RBMS3	94	92.166	Vulpes_vulpes
ENSLBEG00000027388	-	69	81.046	ENSXETG00000032055	RBMS3	98	81.046	Xenopus_tropicalis
ENSLBEG00000027388	-	92	82.005	ENSXCOG00000019600	-	98	81.675	Xiphophorus_couchianus
ENSLBEG00000027388	-	99	81.235	ENSXMAG00000021783	rbms3	99	80.760	Xiphophorus_maculatus
ENSLBEG00000027388	-	100	98.082	ENSXMAG00000014382	-	100	98.082	Xiphophorus_maculatus