EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000027501 (Gene tree)
Gene ID: 109999112
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10264 bases
Position: chrFKLU01000534.1:133218-143481
Accession: 109999112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036790	Sua5_yciO_yrdC	PF01300.18	2.8e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038323	-	4520	XM_020654038	ENSLBEP00000036790	267 (aa)	XP_020509694	UPI0009B4A2AD

Gene Model

Click here to download ENSLBEG00000027501's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027501's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027501	yrdc	97	54.511	ENSG00000196449	YRDC	94	54.511	Homo_sapiens
ENSLBEG00000027501	yrdc	99	82.707	ENSAPOG00000024293	yrdc	99	82.707	Acanthochromis_polyacanthus
ENSLBEG00000027501	yrdc	67	65.027	ENSAMEG00000001173	YRDC	97	65.027	Ailuropoda_melanoleuca
ENSLBEG00000027501	yrdc	99	83.083	ENSACIG00000017330	yrdc	99	83.083	Amphilophus_citrinellus
ENSLBEG00000027501	yrdc	99	83.835	ENSAOCG00000021647	yrdc	99	83.835	Amphiprion_ocellaris
ENSLBEG00000027501	yrdc	99	83.459	ENSAPEG00000006164	yrdc	99	83.459	Amphiprion_percula
ENSLBEG00000027501	yrdc	98	82.759	ENSATEG00000010086	yrdc	98	82.759	Anabas_testudineus
ENSLBEG00000027501	yrdc	71	63.402	ENSACAG00000017203	YRDC	98	60.952	Anolis_carolinensis
ENSLBEG00000027501	yrdc	81	59.361	ENSANAG00000028788	-	93	59.361	Aotus_nancymaae
ENSLBEG00000027501	yrdc	75	59.709	ENSANAG00000031052	-	75	59.709	Aotus_nancymaae
ENSLBEG00000027501	yrdc	99	84.644	ENSACLG00000027775	yrdc	99	84.644	Astatotilapia_calliptera
ENSLBEG00000027501	yrdc	95	69.922	ENSAMXG00000037791	yrdc	98	69.492	Astyanax_mexicanus
ENSLBEG00000027501	yrdc	97	55.303	ENSBTAG00000006510	YRDC	94	55.303	Bos_taurus
ENSLBEG00000027501	yrdc	76	36.946	WBGene00012997	Y48C3A.18	98	37.815	Caenorhabditis_elegans
ENSLBEG00000027501	yrdc	97	54.135	ENSCJAG00000002078	YRDC	72	54.135	Callithrix_jacchus
ENSLBEG00000027501	yrdc	90	56.379	ENSCAFG00000003253	YRDC	87	56.379	Canis_familiaris
ENSLBEG00000027501	yrdc	75	63.725	ENSCAFG00020007843	YRDC	74	63.725	Canis_lupus_dingo
ENSLBEG00000027501	yrdc	96	54.826	ENSCHIG00000007882	YRDC	93	54.826	Capra_hircus
ENSLBEG00000027501	yrdc	62	64.706	ENSTSYG00000005555	YRDC	61	64.706	Carlito_syrichta
ENSLBEG00000027501	yrdc	84	59.825	ENSCPOG00000036144	YRDC	81	59.825	Cavia_porcellus
ENSLBEG00000027501	yrdc	97	53.759	ENSCCAG00000028891	YRDC	81	58.515	Cebus_capucinus
ENSLBEG00000027501	yrdc	97	52.632	ENSCATG00000036928	YRDC	94	53.759	Cercocebus_atys
ENSLBEG00000027501	yrdc	70	65.104	ENSCLAG00000015012	YRDC	81	58.079	Chinchilla_lanigera
ENSLBEG00000027501	yrdc	97	52.632	ENSCSAG00000001116	YRDC	94	53.759	Chlorocebus_sabaeus
ENSLBEG00000027501	yrdc	52	62.143	ENSCHOG00000005500	YRDC	67	62.143	Choloepus_hoffmanni
ENSLBEG00000027501	yrdc	78	65.566	ENSCPBG00000018446	YRDC	91	65.566	Chrysemys_picta_bellii
ENSLBEG00000027501	yrdc	75	50.235	ENSCING00000007564	-	98	50.235	Ciona_intestinalis
ENSLBEG00000027501	yrdc	75	47.867	ENSCSAVG00000009982	-	98	47.867	Ciona_savignyi
ENSLBEG00000027501	yrdc	84	57.456	ENSCANG00000031111	YRDC	81	58.515	Colobus_angolensis_palliatus
ENSLBEG00000027501	yrdc	84	59.211	ENSCGRG00001014496	-	81	58.952	Cricetulus_griseus_chok1gshd
ENSLBEG00000027501	yrdc	84	53.947	ENSCGRG00001000829	-	63	53.478	Cricetulus_griseus_chok1gshd
ENSLBEG00000027501	yrdc	92	72.374	ENSCSEG00000019075	yrdc	94	72.374	Cynoglossus_semilaevis
ENSLBEG00000027501	yrdc	99	75.000	ENSCVAG00000017355	yrdc	99	75.000	Cyprinodon_variegatus
ENSLBEG00000027501	yrdc	88	74.468	ENSDARG00000041428	yrdc	99	74.468	Danio_rerio
ENSLBEG00000027501	yrdc	97	53.585	ENSDNOG00000038789	-	82	57.277	Dasypus_novemcinctus
ENSLBEG00000027501	yrdc	70	46.907	ENSDNOG00000036198	-	94	46.907	Dasypus_novemcinctus
ENSLBEG00000027501	yrdc	69	66.138	ENSDORG00000008788	Yrdc	84	66.138	Dipodomys_ordii
ENSLBEG00000027501	yrdc	87	44.672	FBgn0061361	CG33786	98	44.672	Drosophila_melanogaster
ENSLBEG00000027501	yrdc	96	43.182	ENSETEG00000003442	YRDC	93	43.182	Echinops_telfairi
ENSLBEG00000027501	yrdc	88	51.271	ENSEBUG00000014080	yrdc	99	51.271	Eptatretus_burgeri
ENSLBEG00000027501	yrdc	75	64.390	ENSEASG00005012253	YRDC	94	53.455	Equus_asinus_asinus
ENSLBEG00000027501	yrdc	97	55.094	ENSECAG00000022522	YRDC	94	54.682	Equus_caballus
ENSLBEG00000027501	yrdc	99	73.408	ENSELUG00000018071	yrdc	88	73.408	Esox_lucius
ENSLBEG00000027501	yrdc	97	53.585	ENSFCAG00000011018	YRDC	81	58.079	Felis_catus
ENSLBEG00000027501	yrdc	69	68.783	ENSFALG00000000964	YRDC	88	68.229	Ficedula_albicollis
ENSLBEG00000027501	yrdc	97	76.154	ENSFHEG00000001029	yrdc	96	75.732	Fundulus_heteroclitus
ENSLBEG00000027501	yrdc	77	80.488	ENSGMOG00000015635	yrdc	99	80.488	Gadus_morhua
ENSLBEG00000027501	yrdc	89	60.331	ENSGALG00000029001	YRDC	91	60.331	Gallus_gallus
ENSLBEG00000027501	yrdc	68	30.769	ENSGALG00000025899	-	65	30.769	Gallus_gallus
ENSLBEG00000027501	yrdc	99	79.323	ENSGAFG00000008396	yrdc	99	79.323	Gambusia_affinis
ENSLBEG00000027501	yrdc	87	83.966	ENSGACG00000013878	yrdc	98	83.966	Gasterosteus_aculeatus
ENSLBEG00000027501	yrdc	84	63.436	ENSGAGG00000014968	YRDC	98	63.436	Gopherus_agassizii
ENSLBEG00000027501	yrdc	97	54.511	ENSGGOG00000007619	YRDC	94	54.511	Gorilla_gorilla
ENSLBEG00000027501	yrdc	99	84.644	ENSHBUG00000009298	yrdc	99	84.644	Haplochromis_burtoni
ENSLBEG00000027501	yrdc	84	58.952	ENSHGLG00000014075	YRDC	81	58.952	Heterocephalus_glaber_female
ENSLBEG00000027501	yrdc	74	63.861	ENSHGLG00100002734	YRDC	73	63.861	Heterocephalus_glaber_male
ENSLBEG00000027501	yrdc	99	66.920	ENSHCOG00000006598	yrdc	99	66.920	Hippocampus_comes
ENSLBEG00000027501	yrdc	88	76.496	ENSIPUG00000014985	yrdc	97	76.496	Ictalurus_punctatus
ENSLBEG00000027501	yrdc	97	56.180	ENSSTOG00000001643	YRDC	94	56.180	Ictidomys_tridecemlineatus
ENSLBEG00000027501	yrdc	94	83.333	ENSKMAG00000013468	yrdc	94	83.333	Kryptolebias_marmoratus
ENSLBEG00000027501	yrdc	80	33.621	ENSLACG00000017624	si:ch211-153b23.3	67	33.621	Latimeria_chalumnae
ENSLBEG00000027501	yrdc	97	57.299	ENSLACG00000010689	YRDC	94	68.137	Latimeria_chalumnae
ENSLBEG00000027501	yrdc	88	70.124	ENSLOCG00000003321	yrdc	99	70.124	Lepisosteus_oculatus
ENSLBEG00000027501	yrdc	76	63.333	ENSLAFG00000017556	YRDC	75	63.333	Loxodonta_africana
ENSLBEG00000027501	yrdc	75	61.275	ENSMFAG00000003487	YRDC	96	62.745	Macaca_fascicularis
ENSLBEG00000027501	yrdc	97	52.632	ENSMMUG00000005372	YRDC	70	53.759	Macaca_mulatta
ENSLBEG00000027501	yrdc	97	52.632	ENSMNEG00000029348	YRDC	94	53.759	Macaca_nemestrina
ENSLBEG00000027501	yrdc	52	65.035	ENSMLEG00000041122	YRDC	95	67.133	Mandrillus_leucophaeus
ENSLBEG00000027501	yrdc	98	80.989	ENSMAMG00000007315	yrdc	98	80.989	Mastacembelus_armatus
ENSLBEG00000027501	yrdc	99	84.644	ENSMZEG00005006948	yrdc	99	84.644	Maylandia_zebra
ENSLBEG00000027501	yrdc	73	67.677	ENSMGAG00000002833	YRDC	97	67.677	Meleagris_gallopavo
ENSLBEG00000027501	yrdc	84	59.649	ENSMICG00000031688	YRDC	82	59.389	Microcebus_murinus
ENSLBEG00000027501	yrdc	62	53.939	ENSMOCG00000000164	-	64	53.614	Microtus_ochrogaster
ENSLBEG00000027501	yrdc	99	82.707	ENSMMOG00000002119	yrdc	99	82.707	Mola_mola
ENSLBEG00000027501	yrdc	77	63.507	ENSMODG00000017750	YRDC	75	63.507	Monodelphis_domestica
ENSLBEG00000027501	yrdc	97	82.308	ENSMALG00000012471	yrdc	98	82.308	Monopterus_albus
ENSLBEG00000027501	yrdc	78	59.624	MGP_CAROLIEiJ_G0026453	Yrdc	98	70.874	Mus_caroli
ENSLBEG00000027501	yrdc	84	59.389	ENSMUSG00000028889	Yrdc	100	71.429	Mus_musculus
ENSLBEG00000027501	yrdc	84	60.262	MGP_PahariEiJ_G0028784	Yrdc	100	71.429	Mus_pahari
ENSLBEG00000027501	yrdc	84	59.389	MGP_SPRETEiJ_G0027432	Yrdc	81	59.389	Mus_spretus
ENSLBEG00000027501	yrdc	74	63.366	ENSMPUG00000014542	YRDC	81	63.366	Mustela_putorius_furo
ENSLBEG00000027501	yrdc	99	53.455	ENSMLUG00000000955	-	97	53.455	Myotis_lucifugus
ENSLBEG00000027501	yrdc	72	59.898	ENSMLUG00000024310	-	97	59.898	Myotis_lucifugus
ENSLBEG00000027501	yrdc	77	51.887	ENSMLUG00000028796	-	75	51.887	Myotis_lucifugus
ENSLBEG00000027501	yrdc	75	63.415	ENSNGAG00000019099	Yrdc	73	63.415	Nannospalax_galili
ENSLBEG00000027501	yrdc	99	84.211	ENSNBRG00000009475	yrdc	100	84.211	Neolamprologus_brichardi
ENSLBEG00000027501	yrdc	97	54.511	ENSNLEG00000011665	YRDC	94	54.511	Nomascus_leucogenys
ENSLBEG00000027501	yrdc	75	64.390	ENSMEUG00000005068	YRDC	95	64.390	Notamacropus_eugenii
ENSLBEG00000027501	yrdc	96	54.789	ENSODEG00000007401	YRDC	100	70.476	Octodon_degus
ENSLBEG00000027501	yrdc	89	88.608	ENSONIG00000016213	yrdc	99	88.608	Oreochromis_niloticus
ENSLBEG00000027501	yrdc	97	55.094	ENSOCUG00000005384	YRDC	90	54.682	Oryctolagus_cuniculus
ENSLBEG00000027501	yrdc	99	74.349	ENSORLG00000014393	yrdc	99	74.349	Oryzias_latipes
ENSLBEG00000027501	yrdc	99	74.906	ENSORLG00020019663	yrdc	99	74.906	Oryzias_latipes_hni
ENSLBEG00000027501	yrdc	99	74.157	ENSORLG00015004625	yrdc	99	74.157	Oryzias_latipes_hsok
ENSLBEG00000027501	yrdc	99	76.692	ENSOMEG00000018550	yrdc	99	76.692	Oryzias_melastigma
ENSLBEG00000027501	yrdc	84	58.079	ENSOGAG00000030474	YRDC	83	58.079	Otolemur_garnettii
ENSLBEG00000027501	yrdc	84	58.515	ENSOARG00000019873	YRDC	81	58.515	Ovis_aries
ENSLBEG00000027501	yrdc	51	68.794	ENSPPAG00000039722	-	95	68.794	Pan_paniscus
ENSLBEG00000027501	yrdc	97	53.585	ENSPPRG00000007752	YRDC	81	58.079	Panthera_pardus
ENSLBEG00000027501	yrdc	52	66.667	ENSPTIG00000019821	YRDC	62	66.667	Panthera_tigris_altaica
ENSLBEG00000027501	yrdc	97	54.511	ENSPTRG00000000557	YRDC	94	54.511	Pan_troglodytes
ENSLBEG00000027501	yrdc	97	52.632	ENSPANG00000006487	YRDC	71	53.759	Papio_anubis
ENSLBEG00000027501	yrdc	97	69.962	ENSPKIG00000004574	yrdc	96	69.962	Paramormyrops_kingsleyae
ENSLBEG00000027501	yrdc	83	62.667	ENSPSIG00000006483	YRDC	77	62.667	Pelodiscus_sinensis
ENSLBEG00000027501	yrdc	99	75.564	ENSPMGG00000004184	yrdc	96	79.757	Periophthalmus_magnuspinnatus
ENSLBEG00000027501	yrdc	63	63.372	ENSPEMG00000016985	Yrdc	75	63.372	Peromyscus_maniculatus_bairdii
ENSLBEG00000027501	yrdc	64	58.192	ENSPMAG00000002905	yrdc	96	58.192	Petromyzon_marinus
ENSLBEG00000027501	yrdc	79	61.364	ENSPCIG00000025731	YRDC	79	61.364	Phascolarctos_cinereus
ENSLBEG00000027501	yrdc	99	79.699	ENSPFOG00000023097	yrdc	99	79.699	Poecilia_formosa
ENSLBEG00000027501	yrdc	99	79.323	ENSPLAG00000020882	yrdc	99	79.323	Poecilia_latipinna
ENSLBEG00000027501	yrdc	99	80.228	ENSPMEG00000013237	yrdc	99	80.228	Poecilia_mexicana
ENSLBEG00000027501	yrdc	99	80.827	ENSPREG00000005285	yrdc	99	80.827	Poecilia_reticulata
ENSLBEG00000027501	yrdc	75	63.725	ENSPPYG00000001523	-	84	63.725	Pongo_abelii
ENSLBEG00000027501	yrdc	84	58.952	ENSPCAG00000016850	YRDC	81	58.952	Procavia_capensis
ENSLBEG00000027501	yrdc	84	59.649	ENSPCOG00000013214	YRDC	81	59.389	Propithecus_coquereli
ENSLBEG00000027501	yrdc	96	56.322	ENSPVAG00000010147	YRDC	93	56.322	Pteropus_vampyrus
ENSLBEG00000027501	yrdc	99	84.270	ENSPNYG00000013956	yrdc	99	84.270	Pundamilia_nyererei
ENSLBEG00000027501	yrdc	81	76.744	ENSPNAG00000015625	yrdc	89	76.744	Pygocentrus_nattereri
ENSLBEG00000027501	yrdc	84	59.471	ENSRNOG00000025424	Yrdc	81	58.952	Rattus_norvegicus
ENSLBEG00000027501	yrdc	84	57.456	ENSRBIG00000032289	YRDC	81	58.515	Rhinopithecus_bieti
ENSLBEG00000027501	yrdc	82	57.895	ENSRROG00000039370	YRDC	78	59.211	Rhinopithecus_roxellana
ENSLBEG00000027501	yrdc	72	63.959	ENSSBOG00000018937	YRDC	84	63.959	Saimiri_boliviensis_boliviensis
ENSLBEG00000027501	yrdc	52	67.361	ENSSHAG00000013957	-	97	67.361	Sarcophilus_harrisii
ENSLBEG00000027501	yrdc	80	75.115	ENSSFOG00015006128	yrdc	93	75.115	Scleropages_formosus
ENSLBEG00000027501	yrdc	88	86.809	ENSSMAG00000005195	yrdc	98	83.333	Scophthalmus_maximus
ENSLBEG00000027501	yrdc	99	85.714	ENSSDUG00000009775	yrdc	100	85.714	Seriola_dumerili
ENSLBEG00000027501	yrdc	52	36.054	ENSSDUG00000006736	-	75	36.054	Seriola_dumerili
ENSLBEG00000027501	yrdc	99	85.714	ENSSLDG00000003196	yrdc	100	85.714	Seriola_lalandi_dorsalis
ENSLBEG00000027501	yrdc	76	65.865	ENSSPUG00000003946	YRDC	81	65.865	Sphenodon_punctatus
ENSLBEG00000027501	yrdc	99	81.203	ENSSPAG00000012559	yrdc	99	81.203	Stegastes_partitus
ENSLBEG00000027501	yrdc	96	55.385	ENSSSCG00000040425	YRDC	93	54.962	Sus_scrofa
ENSLBEG00000027501	yrdc	52	71.831	ENSTGUG00000001507	YRDC	97	71.831	Taeniopygia_guttata
ENSLBEG00000027501	yrdc	94	74.708	ENSTRUG00000005923	yrdc	95	74.708	Takifugu_rubripes
ENSLBEG00000027501	yrdc	55	64.667	ENSTBEG00000008863	YRDC	96	64.667	Tupaia_belangeri
ENSLBEG00000027501	yrdc	51	69.504	ENSTTRG00000013538	-	95	69.504	Tursiops_truncatus
ENSLBEG00000027501	yrdc	73	64.824	ENSUAMG00000006150	YRDC	98	64.824	Ursus_americanus
ENSLBEG00000027501	yrdc	84	46.725	ENSVPAG00000006642	YRDC	97	46.725	Vicugna_pacos
ENSLBEG00000027501	yrdc	75	68.627	ENSXETG00000014420	yrdc	86	68.627	Xenopus_tropicalis
ENSLBEG00000027501	yrdc	89	81.857	ENSXCOG00000000829	yrdc	99	81.857	Xiphophorus_couchianus
ENSLBEG00000027501	yrdc	99	79.323	ENSXMAG00000014606	yrdc	94	79.323	Xiphophorus_maculatus