EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027508 (Gene tree)
Gene ID: 109995095
Gene Symbol: hnrnpd
Alias: wu:fa28b06|zgc:162951
Full Name: heterogeneous nuclear ribonucleoprotein D0-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 7189 bases
Position: chrFKLU01000315.1:201609-208797
Accession: 109995095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036832	CBFNT	PF08143.11	8.5e-06	1	1
ENSLBEP00000036817	CBFNT	PF08143.11	2.2e-05	1	1
ENSLBEP00000036826	CBFNT	PF08143.11	0.0001	1	1
ENSLBEP00000036817	RRM_1	PF00076.22	1e-32	1	2
ENSLBEP00000036817	RRM_1	PF00076.22	1e-32	2	2
ENSLBEP00000036832	RRM_1	PF00076.22	1.2e-32	1	2
ENSLBEP00000036832	RRM_1	PF00076.22	1.2e-32	2	2
ENSLBEP00000036826	RRM_1	PF00076.22	1.3e-32	1	2
ENSLBEP00000036826	RRM_1	PF00076.22	1.3e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038365	-	855	-	ENSLBEP00000036832	284 (aa)	-	-
ENSLBET00000038350	-	888	-	ENSLBEP00000036817	295 (aa)	-	-
ENSLBET00000038359	-	951	XM_020648696	ENSLBEP00000036826	316 (aa)	XP_020504352	-

Gene Model

Click here to download ENSLBEG00000027508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027508	hnrnpd	60	35.065	ENSLBEG00000022827	tardbp	67	38.129
ENSLBEG00000027508	hnrnpd	51	41.573	ENSLBEG00000000292	cirbpa	74	41.573
ENSLBEG00000027508	hnrnpd	51	37.313	ENSLBEG00000009909	rbm39b	58	34.066
ENSLBEG00000027508	hnrnpd	55	30.208	ENSLBEG00000016163	RBM38	55	30.137
ENSLBEG00000027508	hnrnpd	77	36.214	ENSLBEG00000000569	dazap1	55	38.496
ENSLBEG00000027508	hnrnpd	90	67.025	ENSLBEG00000006595	hnrnpaba	90	61.613
ENSLBEG00000027508	hnrnpd	60	39.344	ENSLBEG00000010010	hnrnpa1a	71	34.677
ENSLBEG00000027508	hnrnpd	89	36.398	ENSLBEG00000001375	-	57	42.500
ENSLBEG00000027508	hnrnpd	56	41.667	ENSLBEG00000006362	-	78	41.667
ENSLBEG00000027508	hnrnpd	72	41.202	ENSLBEG00000007061	msi2a	88	48.507
ENSLBEG00000027508	hnrnpd	89	60.714	ENSLBEG00000004479	-	89	59.177
ENSLBEG00000027508	hnrnpd	71	37.198	ENSLBEG00000016767	hnrnpa3	76	39.453
ENSLBEG00000027508	hnrnpd	84	38.115	ENSLBEG00000008789	MSI1	60	43.939

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027508	hnrnpd	94	79.928	ENSG00000138668	HNRNPD	100	88.288	Homo_sapiens
ENSLBEG00000027508	hnrnpd	100	92.429	ENSAPOG00000006184	hnrnpd	100	95.584	Acanthochromis_polyacanthus
ENSLBEG00000027508	hnrnpd	94	75.084	ENSAMEG00000005158	HNRNPD	96	78.247	Ailuropoda_melanoleuca
ENSLBEG00000027508	hnrnpd	82	96.694	ENSACIG00000008353	hnrnpd	86	95.094	Amphilophus_citrinellus
ENSLBEG00000027508	hnrnpd	100	92.114	ENSAOCG00000014191	hnrnpd	100	95.268	Amphiprion_ocellaris
ENSLBEG00000027508	hnrnpd	100	92.114	ENSAPEG00000005603	hnrnpd	100	95.268	Amphiprion_percula
ENSLBEG00000027508	hnrnpd	100	92.429	ENSATEG00000007097	hnrnpd	100	95.584	Anabas_testudineus
ENSLBEG00000027508	hnrnpd	94	80.769	ENSACAG00000010342	HNRNPD	100	83.846	Anolis_carolinensis
ENSLBEG00000027508	hnrnpd	94	79.928	ENSANAG00000035221	HNRNPD	82	85.612	Aotus_nancymaae
ENSLBEG00000027508	hnrnpd	100	95.253	ENSACLG00000025213	hnrnpd	100	95.253	Astatotilapia_calliptera
ENSLBEG00000027508	hnrnpd	94	96.139	ENSACLG00000026497	hnrnpd	100	96.139	Astatotilapia_calliptera
ENSLBEG00000027508	hnrnpd	100	85.127	ENSAMXG00000001477	hnrnpd	100	84.494	Astyanax_mexicanus
ENSLBEG00000027508	hnrnpd	94	74.832	ENSBTAG00000013952	HNRNPD	86	78.247	Bos_taurus
ENSLBEG00000027508	hnrnpd	94	79.928	ENSCJAG00000015165	HNRNPD	82	85.612	Callithrix_jacchus
ENSLBEG00000027508	hnrnpd	94	74.832	ENSCAFG00000025045	HNRNPD	86	78.247	Canis_familiaris
ENSLBEG00000027508	hnrnpd	94	74.832	ENSCAFG00020010713	HNRNPD	86	78.247	Canis_lupus_dingo
ENSLBEG00000027508	hnrnpd	94	79.928	ENSCHIG00000022317	HNRNPD	85	83.391	Capra_hircus
ENSLBEG00000027508	hnrnpd	89	77.561	ENSTSYG00000010395	HNRNPD	100	84.390	Carlito_syrichta
ENSLBEG00000027508	hnrnpd	94	66.667	ENSCPOG00000040484	HNRNPD	87	71.429	Cavia_porcellus
ENSLBEG00000027508	hnrnpd	63	58.706	ENSCCAG00000021563	-	79	62.745	Cebus_capucinus
ENSLBEG00000027508	hnrnpd	94	79.928	ENSCCAG00000024528	HNRNPD	82	85.612	Cebus_capucinus
ENSLBEG00000027508	hnrnpd	94	79.928	ENSCATG00000039829	HNRNPD	82	85.612	Cercocebus_atys
ENSLBEG00000027508	hnrnpd	94	80.216	ENSCLAG00000006540	HNRNPD	92	85.612	Chinchilla_lanigera
ENSLBEG00000027508	hnrnpd	94	74.832	ENSCSAG00000004463	HNRNPD	83	80.135	Chlorocebus_sabaeus
ENSLBEG00000027508	hnrnpd	94	77.491	ENSCHOG00000000045	HNRNPD	98	83.026	Choloepus_hoffmanni
ENSLBEG00000027508	hnrnpd	94	80.220	ENSCPBG00000008025	HNRNPD	86	82.986	Chrysemys_picta_bellii
ENSLBEG00000027508	hnrnpd	94	80.287	ENSCANG00000018501	HNRNPD	82	85.971	Colobus_angolensis_palliatus
ENSLBEG00000027508	hnrnpd	94	80.287	ENSCGRG00001014634	Hnrnpd	86	84.083	Cricetulus_griseus_chok1gshd
ENSLBEG00000027508	hnrnpd	94	77.860	ENSCGRG00000007563	Hnrnpd	96	82.784	Cricetulus_griseus_crigri
ENSLBEG00000027508	hnrnpd	100	88.088	ENSCSEG00000010909	hnrnpd	100	83.699	Cynoglossus_semilaevis
ENSLBEG00000027508	hnrnpd	100	93.060	ENSCVAG00000019790	hnrnpd	100	93.060	Cyprinodon_variegatus
ENSLBEG00000027508	hnrnpd	100	84.591	ENSDARG00000059246	hnrnpd	100	84.227	Danio_rerio
ENSLBEG00000027508	hnrnpd	60	72.159	ENSDNOG00000041055	-	69	72.159	Dasypus_novemcinctus
ENSLBEG00000027508	hnrnpd	94	77.860	ENSDNOG00000013830	-	76	83.026	Dasypus_novemcinctus
ENSLBEG00000027508	hnrnpd	73	71.628	ENSDNOG00000045079	-	70	71.963	Dasypus_novemcinctus
ENSLBEG00000027508	hnrnpd	94	80.216	ENSDORG00000012507	Hnrnpd	99	83.448	Dipodomys_ordii
ENSLBEG00000027508	hnrnpd	94	75.342	ENSETEG00000016709	HNRNPD	86	78.896	Echinops_telfairi
ENSLBEG00000027508	hnrnpd	94	79.928	ENSEASG00005016278	HNRNPD	85	83.391	Equus_asinus_asinus
ENSLBEG00000027508	hnrnpd	94	74.832	ENSECAG00000009344	HNRNPD	86	78.247	Equus_caballus
ENSLBEG00000027508	hnrnpd	94	67.450	ENSEEUG00000007552	HNRNPD	86	69.156	Erinaceus_europaeus
ENSLBEG00000027508	hnrnpd	84	79.681	ENSELUG00000003230	hnrnpd	84	82.072	Esox_lucius
ENSLBEG00000027508	hnrnpd	94	79.928	ENSFCAG00000027404	HNRNPD	86	78.247	Felis_catus
ENSLBEG00000027508	hnrnpd	94	80.216	ENSFALG00000005716	HNRNPD	87	83.391	Ficedula_albicollis
ENSLBEG00000027508	hnrnpd	94	77.860	ENSFDAG00000007958	HNRNPD	81	82.784	Fukomys_damarensis
ENSLBEG00000027508	hnrnpd	100	91.483	ENSFHEG00000006838	hnrnpd	100	94.637	Fundulus_heteroclitus
ENSLBEG00000027508	hnrnpd	100	76.875	ENSGMOG00000018481	hnrnpd	100	79.062	Gadus_morhua
ENSLBEG00000027508	hnrnpd	94	80.000	ENSGALG00000011184	HNRNPD	100	85.769	Gallus_gallus
ENSLBEG00000027508	hnrnpd	100	90.000	ENSGAFG00000003714	hnrnpd	100	89.688	Gambusia_affinis
ENSLBEG00000027508	hnrnpd	100	86.068	ENSGACG00000015669	hnrnpd	100	89.474	Gasterosteus_aculeatus
ENSLBEG00000027508	hnrnpd	86	75.342	ENSGAGG00000003656	HNRNPD	95	74.233	Gopherus_agassizii
ENSLBEG00000027508	hnrnpd	94	80.077	ENSGGOG00000026760	HNRNPD	94	85.824	Gorilla_gorilla
ENSLBEG00000027508	hnrnpd	100	95.570	ENSHBUG00000011794	hnrnpd	100	95.570	Haplochromis_burtoni
ENSLBEG00000027508	hnrnpd	94	80.216	ENSHGLG00000004214	HNRNPD	82	85.971	Heterocephalus_glaber_female
ENSLBEG00000027508	hnrnpd	94	80.077	ENSHGLG00100005996	HNRNPD	100	86.154	Heterocephalus_glaber_male
ENSLBEG00000027508	hnrnpd	100	79.245	ENSHCOG00000000087	hnrnpd	97	82.390	Hippocampus_comes
ENSLBEG00000027508	hnrnpd	98	83.601	ENSIPUG00000024954	hnrnpd	99	82.958	Ictalurus_punctatus
ENSLBEG00000027508	hnrnpd	94	79.928	ENSSTOG00000013970	HNRNPD	88	81.000	Ictidomys_tridecemlineatus
ENSLBEG00000027508	hnrnpd	94	79.928	ENSJJAG00000023387	Hnrnpd	97	83.391	Jaculus_jaculus
ENSLBEG00000027508	hnrnpd	100	88.644	ENSKMAG00000004310	hnrnpd	100	91.798	Kryptolebias_marmoratus
ENSLBEG00000027508	hnrnpd	100	75.000	ENSLACG00000005306	HNRNPD	100	78.438	Latimeria_chalumnae
ENSLBEG00000027508	hnrnpd	100	81.962	ENSLOCG00000010743	hnrnpd	100	81.013	Lepisosteus_oculatus
ENSLBEG00000027508	hnrnpd	94	77.860	ENSLAFG00000016483	HNRNPD	98	82.784	Loxodonta_africana
ENSLBEG00000027508	hnrnpd	94	79.928	ENSMFAG00000031674	HNRNPD	82	85.612	Macaca_fascicularis
ENSLBEG00000027508	hnrnpd	94	79.928	ENSMNEG00000028199	HNRNPD	82	85.612	Macaca_nemestrina
ENSLBEG00000027508	hnrnpd	94	79.928	ENSMLEG00000028370	HNRNPD	82	85.612	Mandrillus_leucophaeus
ENSLBEG00000027508	hnrnpd	100	94.620	ENSMAMG00000004971	hnrnpd	100	94.620	Mastacembelus_armatus
ENSLBEG00000027508	hnrnpd	100	95.253	ENSMZEG00005007558	hnrnpd	100	95.253	Maylandia_zebra
ENSLBEG00000027508	hnrnpd	94	80.077	ENSMGAG00000008051	HNRNPD	100	85.824	Meleagris_gallopavo
ENSLBEG00000027508	hnrnpd	88	80.287	ENSMAUG00000008830	Hnrnpd	93	79.167	Mesocricetus_auratus
ENSLBEG00000027508	hnrnpd	94	80.586	ENSMICG00000010984	HNRNPD	90	83.793	Microcebus_murinus
ENSLBEG00000027508	hnrnpd	94	80.287	ENSMOCG00000021398	Hnrnpd	85	84.083	Microtus_ochrogaster
ENSLBEG00000027508	hnrnpd	100	92.114	ENSMMOG00000008627	hnrnpd	100	92.114	Mola_mola
ENSLBEG00000027508	hnrnpd	88	74.667	ENSMODG00000011898	HNRNPD	81	78.317	Monodelphis_domestica
ENSLBEG00000027508	hnrnpd	100	90.852	ENSMALG00000016024	hnrnpd	100	94.006	Monopterus_albus
ENSLBEG00000027508	hnrnpd	94	80.287	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	92.000	Mus_caroli
ENSLBEG00000027508	hnrnpd	94	80.287	ENSMUSG00000000568	Hnrnpd	100	92.000	Mus_musculus
ENSLBEG00000027508	hnrnpd	94	80.287	MGP_PahariEiJ_G0017224	Hnrnpd	100	92.000	Mus_pahari
ENSLBEG00000027508	hnrnpd	94	80.287	MGP_SPRETEiJ_G0028443	Hnrnpd	100	92.000	Mus_spretus
ENSLBEG00000027508	hnrnpd	94	77.860	ENSMPUG00000014782	HNRNPD	98	83.395	Mustela_putorius_furo
ENSLBEG00000027508	hnrnpd	88	68.121	ENSMLUG00000010628	HNRNPD	86	71.753	Myotis_lucifugus
ENSLBEG00000027508	hnrnpd	88	80.287	ENSNGAG00000013451	Hnrnpd	93	79.167	Nannospalax_galili
ENSLBEG00000027508	hnrnpd	100	95.253	ENSNBRG00000019548	hnrnpd	100	95.253	Neolamprologus_brichardi
ENSLBEG00000027508	hnrnpd	94	80.364	ENSNLEG00000008600	HNRNPD	84	85.818	Nomascus_leucogenys
ENSLBEG00000027508	hnrnpd	68	74.545	ENSMEUG00000006804	-	58	83.030	Notamacropus_eugenii
ENSLBEG00000027508	hnrnpd	94	75.000	ENSOPRG00000009336	HNRNPD	82	78.041	Ochotona_princeps
ENSLBEG00000027508	hnrnpd	88	80.216	ENSODEG00000001897	HNRNPD	97	79.100	Octodon_degus
ENSLBEG00000027508	hnrnpd	100	95.253	ENSONIG00000015390	hnrnpd	100	95.253	Oreochromis_niloticus
ENSLBEG00000027508	hnrnpd	94	80.000	ENSOANG00000001932	HNRNPD	100	85.769	Ornithorhynchus_anatinus
ENSLBEG00000027508	hnrnpd	94	77.860	ENSOCUG00000001357	HNRNPD	98	82.784	Oryctolagus_cuniculus
ENSLBEG00000027508	hnrnpd	100	87.382	ENSORLG00000001833	hnrnpd	100	89.905	Oryzias_latipes
ENSLBEG00000027508	hnrnpd	94	86.851	ENSORLG00020014780	hnrnpd	83	89.965	Oryzias_latipes_hni
ENSLBEG00000027508	hnrnpd	100	87.382	ENSORLG00015002382	hnrnpd	100	89.905	Oryzias_latipes_hsok
ENSLBEG00000027508	hnrnpd	100	84.227	ENSOMEG00000018558	hnrnpd	100	83.596	Oryzias_melastigma
ENSLBEG00000027508	hnrnpd	94	74.832	ENSOGAG00000004075	HNRNPD	83	80.135	Otolemur_garnettii
ENSLBEG00000027508	hnrnpd	94	77.860	ENSOARG00000000579	HNRNPD	98	83.395	Ovis_aries
ENSLBEG00000027508	hnrnpd	97	75.081	ENSPPAG00000035750	HNRNPD	100	84.390	Pan_paniscus
ENSLBEG00000027508	hnrnpd	94	79.928	ENSPPRG00000012258	HNRNPD	85	83.391	Panthera_pardus
ENSLBEG00000027508	hnrnpd	94	78.201	ENSPTIG00000019434	HNRNPD	100	83.391	Panthera_tigris_altaica
ENSLBEG00000027508	hnrnpd	94	79.928	ENSPTRG00000016215	HNRNPD	82	85.612	Pan_troglodytes
ENSLBEG00000027508	hnrnpd	94	79.928	ENSPANG00000011785	HNRNPD	82	85.612	Papio_anubis
ENSLBEG00000027508	hnrnpd	100	84.810	ENSPKIG00000025512	hnrnpd	100	83.861	Paramormyrops_kingsleyae
ENSLBEG00000027508	hnrnpd	82	84.466	ENSPSIG00000017029	HNRNPD	82	87.440	Pelodiscus_sinensis
ENSLBEG00000027508	hnrnpd	95	76.412	ENSPMGG00000017169	hnrnpd	88	83.270	Periophthalmus_magnuspinnatus
ENSLBEG00000027508	hnrnpd	94	74.394	ENSPEMG00000014804	Hnrnpd	90	79.239	Peromyscus_maniculatus_bairdii
ENSLBEG00000027508	hnrnpd	94	79.643	ENSPCIG00000003112	HNRNPD	78	85.000	Phascolarctos_cinereus
ENSLBEG00000027508	hnrnpd	100	89.905	ENSPFOG00000002596	hnrnpd	100	93.060	Poecilia_formosa
ENSLBEG00000027508	hnrnpd	100	89.905	ENSPLAG00000004297	hnrnpd	100	93.060	Poecilia_latipinna
ENSLBEG00000027508	hnrnpd	100	89.905	ENSPMEG00000000152	hnrnpd	100	93.060	Poecilia_mexicana
ENSLBEG00000027508	hnrnpd	93	93.462	ENSPREG00000018081	hnrnpd	95	93.462	Poecilia_reticulata
ENSLBEG00000027508	hnrnpd	94	74.832	ENSPPYG00000014885	HNRNPD	83	80.135	Pongo_abelii
ENSLBEG00000027508	hnrnpd	72	72.441	ENSPPYG00000020411	-	90	69.178	Pongo_abelii
ENSLBEG00000027508	hnrnpd	94	73.579	ENSPCAG00000002182	HNRNPD	83	78.859	Procavia_capensis
ENSLBEG00000027508	hnrnpd	94	79.928	ENSPCOG00000021331	HNRNPD	85	83.391	Propithecus_coquereli
ENSLBEG00000027508	hnrnpd	94	73.154	ENSPVAG00000000003	HNRNPD	86	77.597	Pteropus_vampyrus
ENSLBEG00000027508	hnrnpd	100	95.253	ENSPNYG00000004884	hnrnpd	100	95.253	Pundamilia_nyererei
ENSLBEG00000027508	hnrnpd	100	83.228	ENSPNAG00000016368	hnrnpd	96	83.667	Pygocentrus_nattereri
ENSLBEG00000027508	hnrnpd	94	79.496	ENSRNOG00000002292	Hnrnpd	93	78.275	Rattus_norvegicus
ENSLBEG00000027508	hnrnpd	94	79.928	ENSRBIG00000035345	HNRNPD	82	85.612	Rhinopithecus_bieti
ENSLBEG00000027508	hnrnpd	94	79.928	ENSRROG00000011888	HNRNPD	82	85.612	Rhinopithecus_roxellana
ENSLBEG00000027508	hnrnpd	94	79.928	ENSSBOG00000032881	HNRNPD	82	85.612	Saimiri_boliviensis_boliviensis
ENSLBEG00000027508	hnrnpd	94	77.860	ENSSHAG00000013312	HNRNPD	98	83.395	Sarcophilus_harrisii
ENSLBEG00000027508	hnrnpd	97	86.645	ENSSFOG00015005913	hnrnpd	97	86.645	Scleropages_formosus
ENSLBEG00000027508	hnrnpd	100	87.736	ENSSMAG00000009686	hnrnpd	100	91.824	Scophthalmus_maximus
ENSLBEG00000027508	hnrnpd	100	94.953	ENSSDUG00000010792	hnrnpd	100	94.953	Seriola_dumerili
ENSLBEG00000027508	hnrnpd	100	90.852	ENSSLDG00000015962	hnrnpd	96	91.060	Seriola_lalandi_dorsalis
ENSLBEG00000027508	hnrnpd	94	74.444	ENSSARG00000006883	HNRNPD	98	81.550	Sorex_araneus
ENSLBEG00000027508	hnrnpd	94	80.000	ENSSPUG00000013677	HNRNPD	100	83.077	Sphenodon_punctatus
ENSLBEG00000027508	hnrnpd	100	95.899	ENSSPAG00000021014	hnrnpd	100	95.899	Stegastes_partitus
ENSLBEG00000027508	hnrnpd	94	79.928	ENSSSCG00000009249	HNRNPD	82	85.252	Sus_scrofa
ENSLBEG00000027508	hnrnpd	86	77.055	ENSTGUG00000002858	HNRNPD	93	78.247	Taeniopygia_guttata
ENSLBEG00000027508	hnrnpd	100	90.190	ENSTRUG00000018450	hnrnpd	100	86.709	Takifugu_rubripes
ENSLBEG00000027508	hnrnpd	81	83.817	ENSTNIG00000013499	hnrnpd	92	90.090	Tetraodon_nigroviridis
ENSLBEG00000027508	hnrnpd	94	73.063	ENSTBEG00000002327	HNRNPD	98	78.022	Tupaia_belangeri
ENSLBEG00000027508	hnrnpd	94	74.832	ENSTTRG00000007592	HNRNPD	86	78.247	Tursiops_truncatus
ENSLBEG00000027508	hnrnpd	99	66.667	ENSUAMG00000011374	HNRNPD	83	75.896	Ursus_americanus
ENSLBEG00000027508	hnrnpd	94	79.091	ENSUMAG00000008685	HNRNPD	83	83.026	Ursus_maritimus
ENSLBEG00000027508	hnrnpd	94	80.077	ENSVPAG00000004374	HNRNPD	100	85.824	Vicugna_pacos
ENSLBEG00000027508	hnrnpd	94	74.832	ENSVVUG00000024658	HNRNPD	86	78.247	Vulpes_vulpes
ENSLBEG00000027508	hnrnpd	91	76.000	ENSXETG00000012569	hnrnpd	93	77.617	Xenopus_tropicalis
ENSLBEG00000027508	hnrnpd	93	89.231	ENSXCOG00000017639	hnrnpd	100	93.077	Xiphophorus_couchianus
ENSLBEG00000027508	hnrnpd	100	89.308	ENSXMAG00000019151	hnrnpd	100	92.453	Xiphophorus_maculatus