EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000027518 (Gene tree)
Gene ID: 109997355
Gene Symbol: si:ch211-117n7.8
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 52964 bases
Position: chrFKLU01000414.1:140727-193690
Accession: 109997355
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036820	S1	PF00575.23	3.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038353	-	6652	XM_020651801	ENSLBEP00000036820	1012 (aa)	XP_020507457	UPI0009B4E5D7

Gene Model

Click here to download ENSLBEG00000027518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027518	si:ch211-117n7.8	97	51.600	ENSG00000068784	SRBD1	98	51.734	Homo_sapiens
ENSLBEG00000027518	si:ch211-117n7.8	100	80.411	ENSAPOG00000005103	si:ch211-117n7.8	100	80.411	Acanthochromis_polyacanthus
ENSLBEG00000027518	si:ch211-117n7.8	92	53.542	ENSAMEG00000005993	SRBD1	99	50.865	Ailuropoda_melanoleuca
ENSLBEG00000027518	si:ch211-117n7.8	97	81.837	ENSACIG00000009875	si:ch211-117n7.8	100	81.837	Amphilophus_citrinellus
ENSLBEG00000027518	si:ch211-117n7.8	100	78.880	ENSAOCG00000024718	si:ch211-117n7.8	100	79.666	Amphiprion_ocellaris
ENSLBEG00000027518	si:ch211-117n7.8	97	79.032	ENSAPEG00000002645	si:ch211-117n7.8	100	79.032	Amphiprion_percula
ENSLBEG00000027518	si:ch211-117n7.8	100	79.686	ENSATEG00000010844	si:ch211-117n7.8	100	79.686	Anabas_testudineus
ENSLBEG00000027518	si:ch211-117n7.8	93	53.934	ENSAPLG00000006313	SRBD1	99	51.787	Anas_platyrhynchos
ENSLBEG00000027518	si:ch211-117n7.8	83	56.506	ENSANAG00000025573	SRBD1	98	51.140	Aotus_nancymaae
ENSLBEG00000027518	si:ch211-117n7.8	100	80.118	ENSACLG00000024219	si:ch211-117n7.8	100	80.803	Astatotilapia_calliptera
ENSLBEG00000027518	si:ch211-117n7.8	100	64.579	ENSAMXG00000004294	SRBD1	100	65.298	Astyanax_mexicanus
ENSLBEG00000027518	si:ch211-117n7.8	97	51.807	ENSBTAG00000007508	SRBD1	97	50.202	Bos_taurus
ENSLBEG00000027518	si:ch211-117n7.8	92	53.027	ENSCJAG00000000727	SRBD1	95	53.027	Callithrix_jacchus
ENSLBEG00000027518	si:ch211-117n7.8	97	52.376	ENSCAFG00000002554	SRBD1	99	51.880	Canis_familiaris
ENSLBEG00000027518	si:ch211-117n7.8	97	49.055	ENSCAFG00020026284	SRBD1	97	58.223	Canis_lupus_dingo
ENSLBEG00000027518	si:ch211-117n7.8	97	52.156	ENSCHIG00000016535	SRBD1	98	50.945	Capra_hircus
ENSLBEG00000027518	si:ch211-117n7.8	93	53.001	ENSTSYG00000012797	SRBD1	98	52.071	Carlito_syrichta
ENSLBEG00000027518	si:ch211-117n7.8	93	53.782	ENSCPOG00000004773	SRBD1	95	53.782	Cavia_porcellus
ENSLBEG00000027518	si:ch211-117n7.8	83	56.858	ENSCCAG00000025589	SRBD1	84	56.858	Cebus_capucinus
ENSLBEG00000027518	si:ch211-117n7.8	97	51.600	ENSCATG00000039530	SRBD1	98	51.734	Cercocebus_atys
ENSLBEG00000027518	si:ch211-117n7.8	95	53.560	ENSCLAG00000008623	SRBD1	97	53.560	Chinchilla_lanigera
ENSLBEG00000027518	si:ch211-117n7.8	97	51.394	ENSCSAG00000013350	SRBD1	98	51.530	Chlorocebus_sabaeus
ENSLBEG00000027518	si:ch211-117n7.8	80	79.070	ENSCHOG00000003805	SRBD1	81	79.070	Choloepus_hoffmanni
ENSLBEG00000027518	si:ch211-117n7.8	96	53.211	ENSCPBG00000005677	SRBD1	98	53.134	Chrysemys_picta_bellii
ENSLBEG00000027518	si:ch211-117n7.8	77	40.226	ENSCING00000005950	-	99	40.226	Ciona_intestinalis
ENSLBEG00000027518	si:ch211-117n7.8	77	41.952	ENSCSAVG00000000861	-	99	41.952	Ciona_savignyi
ENSLBEG00000027518	si:ch211-117n7.8	97	51.140	ENSCANG00000016307	SRBD1	98	51.129	Colobus_angolensis_palliatus
ENSLBEG00000027518	si:ch211-117n7.8	99	51.420	ENSCGRG00001000513	Srbd1	99	51.420	Cricetulus_griseus_chok1gshd
ENSLBEG00000027518	si:ch211-117n7.8	99	51.420	ENSCGRG00000002283	Srbd1	99	51.420	Cricetulus_griseus_crigri
ENSLBEG00000027518	si:ch211-117n7.8	100	71.288	ENSCSEG00000000856	si:ch211-117n7.8	100	71.485	Cynoglossus_semilaevis
ENSLBEG00000027518	si:ch211-117n7.8	98	75.050	ENSCVAG00000020212	si:ch211-117n7.8	99	75.553	Cyprinodon_variegatus
ENSLBEG00000027518	si:ch211-117n7.8	93	52.049	ENSDNOG00000018686	SRBD1	96	52.049	Dasypus_novemcinctus
ENSLBEG00000027518	si:ch211-117n7.8	98	51.476	ENSDORG00000010468	Srbd1	98	51.476	Dipodomys_ordii
ENSLBEG00000027518	si:ch211-117n7.8	77	35.013	FBgn0051156	CG31156	79	35.553	Drosophila_melanogaster
ENSLBEG00000027518	si:ch211-117n7.8	73	56.831	ENSETEG00000000739	SRBD1	77	57.013	Echinops_telfairi
ENSLBEG00000027518	si:ch211-117n7.8	71	49.033	ENSEBUG00000008902	si:ch211-117n7.8	96	49.033	Eptatretus_burgeri
ENSLBEG00000027518	si:ch211-117n7.8	97	49.951	ENSEASG00005003132	SRBD1	98	56.929	Equus_asinus_asinus
ENSLBEG00000027518	si:ch211-117n7.8	97	51.626	ENSECAG00000013865	SRBD1	98	51.341	Equus_caballus
ENSLBEG00000027518	si:ch211-117n7.8	100	66.061	ENSELUG00000012592	si:ch211-117n7.8	100	66.380	Esox_lucius
ENSLBEG00000027518	si:ch211-117n7.8	93	52.826	ENSFCAG00000005101	SRBD1	98	51.468	Felis_catus
ENSLBEG00000027518	si:ch211-117n7.8	82	58.134	ENSFALG00000012966	SRBD1	97	52.563	Ficedula_albicollis
ENSLBEG00000027518	si:ch211-117n7.8	98	52.372	ENSFDAG00000016670	SRBD1	99	52.372	Fukomys_damarensis
ENSLBEG00000027518	si:ch211-117n7.8	100	78.431	ENSFHEG00000019480	si:ch211-117n7.8	100	78.431	Fundulus_heteroclitus
ENSLBEG00000027518	si:ch211-117n7.8	82	58.551	ENSGALG00000009990	SRBD1	98	53.681	Gallus_gallus
ENSLBEG00000027518	si:ch211-117n7.8	100	77.036	ENSGAFG00000019664	si:ch211-117n7.8	100	77.134	Gambusia_affinis
ENSLBEG00000027518	si:ch211-117n7.8	61	83.072	ENSGACG00000010794	si:ch211-117n7.8	100	83.072	Gasterosteus_aculeatus
ENSLBEG00000027518	si:ch211-117n7.8	82	58.956	ENSGAGG00000006166	SRBD1	99	58.956	Gopherus_agassizii
ENSLBEG00000027518	si:ch211-117n7.8	97	51.885	ENSGGOG00000005910	SRBD1	99	51.885	Gorilla_gorilla
ENSLBEG00000027518	si:ch211-117n7.8	97	66.599	ENSHBUG00000013207	si:ch211-117n7.8	100	66.902	Haplochromis_burtoni
ENSLBEG00000027518	si:ch211-117n7.8	92	52.917	ENSHGLG00000018153	-	96	52.917	Heterocephalus_glaber_female
ENSLBEG00000027518	si:ch211-117n7.8	92	52.917	ENSHGLG00100015183	-	96	52.917	Heterocephalus_glaber_male
ENSLBEG00000027518	si:ch211-117n7.8	94	66.143	ENSIPUG00000009661	srbd1	100	64.659	Ictalurus_punctatus
ENSLBEG00000027518	si:ch211-117n7.8	83	57.951	ENSSTOG00000005898	SRBD1	84	57.951	Ictidomys_tridecemlineatus
ENSLBEG00000027518	si:ch211-117n7.8	97	50.402	ENSJJAG00000022244	Srbd1	97	50.402	Jaculus_jaculus
ENSLBEG00000027518	si:ch211-117n7.8	99	78.963	ENSKMAG00000003473	si:ch211-117n7.8	100	78.963	Kryptolebias_marmoratus
ENSLBEG00000027518	si:ch211-117n7.8	83	56.706	ENSLACG00000009790	SRBD1	99	56.706	Latimeria_chalumnae
ENSLBEG00000027518	si:ch211-117n7.8	96	62.500	ENSLOCG00000016360	si:ch211-117n7.8	99	61.494	Lepisosteus_oculatus
ENSLBEG00000027518	si:ch211-117n7.8	83	56.975	ENSMFAG00000042026	SRBD1	98	51.635	Macaca_fascicularis
ENSLBEG00000027518	si:ch211-117n7.8	83	56.975	ENSMMUG00000003490	SRBD1	98	51.635	Macaca_mulatta
ENSLBEG00000027518	si:ch211-117n7.8	83	55.451	ENSMNEG00000034701	SRBD1	98	50.347	Macaca_nemestrina
ENSLBEG00000027518	si:ch211-117n7.8	83	57.093	ENSMLEG00000000745	SRBD1	98	51.734	Mandrillus_leucophaeus
ENSLBEG00000027518	si:ch211-117n7.8	100	80.157	ENSMAMG00000021921	si:ch211-117n7.8	100	80.550	Mastacembelus_armatus
ENSLBEG00000027518	si:ch211-117n7.8	100	80.607	ENSMZEG00005027369	si:ch211-117n7.8	100	80.901	Maylandia_zebra
ENSLBEG00000027518	si:ch211-117n7.8	78	55.679	ENSMGAG00000010273	SRBD1	100	55.679	Meleagris_gallopavo
ENSLBEG00000027518	si:ch211-117n7.8	77	56.059	ENSMAUG00000013916	Srbd1	95	56.059	Mesocricetus_auratus
ENSLBEG00000027518	si:ch211-117n7.8	97	51.996	ENSMICG00000007835	SRBD1	98	52.127	Microcebus_murinus
ENSLBEG00000027518	si:ch211-117n7.8	99	51.953	ENSMOCG00000018716	Srbd1	99	51.953	Microtus_ochrogaster
ENSLBEG00000027518	si:ch211-117n7.8	97	77.024	ENSMMOG00000007507	si:ch211-117n7.8	100	77.024	Mola_mola
ENSLBEG00000027518	si:ch211-117n7.8	100	79.045	ENSMALG00000001562	si:ch211-117n7.8	100	79.435	Monopterus_albus
ENSLBEG00000027518	si:ch211-117n7.8	84	55.736	MGP_CAROLIEiJ_G0021934	Srbd1	99	57.566	Mus_caroli
ENSLBEG00000027518	si:ch211-117n7.8	99	50.681	ENSMUSG00000024135	Srbd1	100	54.861	Mus_musculus
ENSLBEG00000027518	si:ch211-117n7.8	99	49.804	MGP_PahariEiJ_G0020924	Srbd1	99	49.804	Mus_pahari
ENSLBEG00000027518	si:ch211-117n7.8	99	50.389	MGP_SPRETEiJ_G0022850	Srbd1	99	50.389	Mus_spretus
ENSLBEG00000027518	si:ch211-117n7.8	93	53.026	ENSMLUG00000007039	SRBD1	97	52.457	Myotis_lucifugus
ENSLBEG00000027518	si:ch211-117n7.8	98	50.048	ENSNGAG00000011893	Srbd1	98	50.048	Nannospalax_galili
ENSLBEG00000027518	si:ch211-117n7.8	98	76.506	ENSNBRG00000012873	si:ch211-117n7.8	100	76.807	Neolamprologus_brichardi
ENSLBEG00000027518	si:ch211-117n7.8	97	51.500	ENSNLEG00000016877	SRBD1	98	51.635	Nomascus_leucogenys
ENSLBEG00000027518	si:ch211-117n7.8	82	56.938	ENSODEG00000012095	SRBD1	85	56.938	Octodon_degus
ENSLBEG00000027518	si:ch211-117n7.8	100	81.391	ENSONIG00000000945	si:ch211-117n7.8	100	84.279	Oreochromis_niloticus
ENSLBEG00000027518	si:ch211-117n7.8	92	52.917	ENSOCUG00000015385	SRBD1	95	53.125	Oryctolagus_cuniculus
ENSLBEG00000027518	si:ch211-117n7.8	100	72.293	ENSORLG00000004427	si:ch211-117n7.8	100	72.293	Oryzias_latipes
ENSLBEG00000027518	si:ch211-117n7.8	100	75.731	ENSORLG00020012792	si:ch211-117n7.8	100	75.731	Oryzias_latipes_hni
ENSLBEG00000027518	si:ch211-117n7.8	100	75.415	ENSORLG00015018598	si:ch211-117n7.8	100	75.415	Oryzias_latipes_hsok
ENSLBEG00000027518	si:ch211-117n7.8	99	74.586	ENSOMEG00000012229	si:ch211-117n7.8	99	79.924	Oryzias_melastigma
ENSLBEG00000027518	si:ch211-117n7.8	98	50.249	ENSOGAG00000001076	SRBD1	98	50.398	Otolemur_garnettii
ENSLBEG00000027518	si:ch211-117n7.8	97	48.740	ENSOARG00000005958	SRBD1	98	48.846	Ovis_aries
ENSLBEG00000027518	si:ch211-117n7.8	83	56.773	ENSPPAG00000038442	SRBD1	98	51.734	Pan_paniscus
ENSLBEG00000027518	si:ch211-117n7.8	93	52.826	ENSPPRG00000003449	SRBD1	98	51.518	Panthera_pardus
ENSLBEG00000027518	si:ch211-117n7.8	93	52.826	ENSPTIG00000012495	SRBD1	98	51.518	Panthera_tigris_altaica
ENSLBEG00000027518	si:ch211-117n7.8	83	57.008	ENSPTRG00000011889	SRBD1	98	51.933	Pan_troglodytes
ENSLBEG00000027518	si:ch211-117n7.8	83	56.975	ENSPANG00000008063	SRBD1	98	51.635	Papio_anubis
ENSLBEG00000027518	si:ch211-117n7.8	99	60.291	ENSPKIG00000021973	si:ch211-117n7.8	99	60.291	Paramormyrops_kingsleyae
ENSLBEG00000027518	si:ch211-117n7.8	82	57.295	ENSPSIG00000008992	SRBD1	98	51.697	Pelodiscus_sinensis
ENSLBEG00000027518	si:ch211-117n7.8	98	72.837	ENSPMGG00000013348	si:ch211-117n7.8	99	73.139	Periophthalmus_magnuspinnatus
ENSLBEG00000027518	si:ch211-117n7.8	99	50.048	ENSPEMG00000020684	Srbd1	99	50.048	Peromyscus_maniculatus_bairdii
ENSLBEG00000027518	si:ch211-117n7.8	100	77.527	ENSPFOG00000010650	si:ch211-117n7.8	100	77.527	Poecilia_formosa
ENSLBEG00000027518	si:ch211-117n7.8	100	77.821	ENSPLAG00000002141	si:ch211-117n7.8	100	77.821	Poecilia_latipinna
ENSLBEG00000027518	si:ch211-117n7.8	100	77.593	ENSPMEG00000018537	si:ch211-117n7.8	100	77.593	Poecilia_mexicana
ENSLBEG00000027518	si:ch211-117n7.8	100	75.564	ENSPREG00000003258	si:ch211-117n7.8	100	75.564	Poecilia_reticulata
ENSLBEG00000027518	si:ch211-117n7.8	97	48.870	ENSPPYG00000012444	SRBD1	97	48.926	Pongo_abelii
ENSLBEG00000027518	si:ch211-117n7.8	75	52.708	ENSPCAG00000005629	SRBD1	80	52.708	Procavia_capensis
ENSLBEG00000027518	si:ch211-117n7.8	93	45.417	ENSPCOG00000017669	SRBD1	98	44.379	Propithecus_coquereli
ENSLBEG00000027518	si:ch211-117n7.8	97	45.680	ENSPVAG00000001782	SRBD1	98	45.866	Pteropus_vampyrus
ENSLBEG00000027518	si:ch211-117n7.8	97	74.419	ENSPNYG00000000508	si:ch211-117n7.8	100	74.722	Pundamilia_nyererei
ENSLBEG00000027518	si:ch211-117n7.8	95	66.079	ENSPNAG00000013492	SRBD1	100	63.930	Pygocentrus_nattereri
ENSLBEG00000027518	si:ch211-117n7.8	82	55.822	ENSRNOG00000014720	Srbd1	83	56.153	Rattus_norvegicus
ENSLBEG00000027518	si:ch211-117n7.8	97	51.100	ENSRBIG00000033486	SRBD1	97	51.198	Rhinopithecus_bieti
ENSLBEG00000027518	si:ch211-117n7.8	97	51.100	ENSRROG00000041599	SRBD1	97	51.198	Rhinopithecus_roxellana
ENSLBEG00000027518	si:ch211-117n7.8	83	56.506	ENSSBOG00000024982	SRBD1	84	56.506	Saimiri_boliviensis_boliviensis
ENSLBEG00000027518	si:ch211-117n7.8	97	61.507	ENSSFOG00015001128	si:ch211-117n7.8	99	61.507	Scleropages_formosus
ENSLBEG00000027518	si:ch211-117n7.8	100	80.645	ENSSMAG00000018256	si:ch211-117n7.8	100	80.645	Scophthalmus_maximus
ENSLBEG00000027518	si:ch211-117n7.8	97	82.016	ENSSLDG00000023189	si:ch211-117n7.8	100	82.016	Seriola_lalandi_dorsalis
ENSLBEG00000027518	si:ch211-117n7.8	93	49.486	ENSSARG00000009740	SRBD1	99	48.289	Sorex_araneus
ENSLBEG00000027518	si:ch211-117n7.8	91	55.388	ENSSPUG00000010475	SRBD1	98	55.567	Sphenodon_punctatus
ENSLBEG00000027518	si:ch211-117n7.8	92	77.979	ENSSPAG00000008092	-	100	75.418	Stegastes_partitus
ENSLBEG00000027518	si:ch211-117n7.8	97	51.473	ENSSSCG00000008445	SRBD1	96	51.462	Sus_scrofa
ENSLBEG00000027518	si:ch211-117n7.8	82	57.075	ENSTGUG00000003878	SRBD1	100	57.075	Taeniopygia_guttata
ENSLBEG00000027518	si:ch211-117n7.8	99	73.756	ENSTRUG00000007080	si:ch211-117n7.8	99	77.384	Takifugu_rubripes
ENSLBEG00000027518	si:ch211-117n7.8	98	73.715	ENSTNIG00000007464	si:ch211-117n7.8	98	73.715	Tetraodon_nigroviridis
ENSLBEG00000027518	si:ch211-117n7.8	64	78.723	ENSTBEG00000004556	SRBD1	69	78.723	Tupaia_belangeri
ENSLBEG00000027518	si:ch211-117n7.8	90	58.201	ENSTTRG00000011871	SRBD1	89	58.201	Tursiops_truncatus
ENSLBEG00000027518	si:ch211-117n7.8	92	53.479	ENSUAMG00000008126	SRBD1	97	55.072	Ursus_americanus
ENSLBEG00000027518	si:ch211-117n7.8	92	53.174	ENSUMAG00000012902	SRBD1	93	53.174	Ursus_maritimus
ENSLBEG00000027518	si:ch211-117n7.8	82	56.553	ENSVPAG00000006825	SRBD1	92	56.553	Vicugna_pacos
ENSLBEG00000027518	si:ch211-117n7.8	97	52.376	ENSVVUG00000005389	SRBD1	98	52.358	Vulpes_vulpes
ENSLBEG00000027518	si:ch211-117n7.8	98	45.489	ENSXETG00000002760	srbd1	98	45.584	Xenopus_tropicalis
ENSLBEG00000027518	si:ch211-117n7.8	100	77.233	ENSXMAG00000016861	si:ch211-117n7.8	100	77.233	Xiphophorus_maculatus