EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027539 (Gene tree)
Gene ID: 109988645
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-37-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 16711 bases
Position: chrFKLU01000006.1:2567039-2583749
Accession: 109988645
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000036864	MMR_HSR1	PF01926.23	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038389	-	962	XM_020640204	ENSLBEP00000036856	244 (aa)	XP_020495860	UPI0009B38748
ENSLBET00000038397	-	657	-	ENSLBEP00000036864	218 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000027539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027539	-	78	39.773	ENSLBEG00000026777	rab33ba	76	39.773
ENSLBEG00000027539	-	86	43.316	ENSLBEG00000026779	rab13	93	43.316
ENSLBEG00000027539	-	82	34.973	ENSLBEG00000027691	RAB17	77	34.973
ENSLBEG00000027539	-	86	32.663	ENSLBEG00000006152	-	96	32.663
ENSLBEG00000027539	-	73	43.396	ENSLBEG00000003748	rab6a	76	43.396
ENSLBEG00000027539	-	70	45.098	ENSLBEG00000013756	rab12	63	45.098
ENSLBEG00000027539	-	87	35.533	ENSLBEG00000020582	rab9a	95	35.533
ENSLBEG00000027539	-	73	43.396	ENSLBEG00000019372	rab6bb	76	43.396
ENSLBEG00000027539	-	76	32.558	ENSLBEG00000027628	si:cabz01085950.1	84	32.558
ENSLBEG00000027539	-	72	31.250	ENSLBEG00000025705	si:ch73-116o1.2	90	31.088
ENSLBEG00000027539	-	72	41.667	ENSLBEG00000007681	si:dkey-16l2.16	94	35.678
ENSLBEG00000027539	-	74	32.099	ENSLBEG00000001905	hrasb	89	33.333
ENSLBEG00000027539	-	74	44.444	ENSLBEG00000027226	-	68	44.444
ENSLBEG00000027539	-	86	32.663	ENSLBEG00000018812	RAB29	96	32.663
ENSLBEG00000027539	-	74	41.975	ENSLBEG00000016446	rab25b	77	41.975
ENSLBEG00000027539	-	73	45.283	ENSLBEG00000026790	-	73	45.283
ENSLBEG00000027539	-	73	48.428	ENSLBEG00000020796	rab2a	79	49.007
ENSLBEG00000027539	-	73	43.478	ENSLBEG00000001193	rab42a	74	43.478
ENSLBEG00000027539	-	87	39.086	ENSLBEG00000002367	rab25a	92	39.086
ENSLBEG00000027539	-	74	43.827	ENSLBEG00000003101	rab4a	76	43.827
ENSLBEG00000027539	-	77	41.040	ENSLBEG00000028426	RAB1A	85	41.040
ENSLBEG00000027539	-	86	32.995	ENSLBEG00000017798	-	95	32.995
ENSLBEG00000027539	-	73	44.654	ENSLBEG00000006087	rab11ba	73	44.654
ENSLBEG00000027539	-	85	42.781	ENSLBEG00000016417	rab11al	89	42.781
ENSLBEG00000027539	-	73	46.626	ENSLBEG00000002926	si:dkey-34d22.5	73	46.626
ENSLBEG00000027539	-	72	35.443	ENSLBEG00000003235	rab22a	81	35.443
ENSLBEG00000027539	-	86	37.436	ENSLBEG00000011478	rab9b	88	37.436
ENSLBEG00000027539	-	76	48.485	ENSLBEG00000001146	rab30	81	48.485
ENSLBEG00000027539	-	68	34.899	ENSLBEG00000003132	rras	90	33.862
ENSLBEG00000027539	-	74	32.927	ENSLBEG00000028450	kras	95	32.979
ENSLBEG00000027539	-	86	36.548	ENSLBEG00000005128	-	86	36.548
ENSLBEG00000027539	-	86	39.791	ENSLBEG00000008746	RAB41	90	39.791
ENSLBEG00000027539	-	86	37.313	ENSLBEG00000005981	-	92	37.313
ENSLBEG00000027539	-	77	42.775	ENSLBEG00000005791	-	80	42.775
ENSLBEG00000027539	-	66	44.444	ENSLBEG00000018063	-	62	44.444
ENSLBEG00000027539	-	76	30.723	ENSLBEG00000013176	rab23	72	33.557
ENSLBEG00000027539	-	80	34.239	ENSLBEG00000018180	si:dkey-13a21.4	88	34.239
ENSLBEG00000027539	-	77	42.857	ENSLBEG00000019428	rab18b	79	42.857
ENSLBEG00000027539	-	86	35.567	ENSLBEG00000025798	zgc:101559	82	35.567
ENSLBEG00000027539	-	78	41.520	ENSLBEG00000004128	rab5c	75	41.520
ENSLBEG00000027539	-	89	38.916	ENSLBEG00000021040	rab1ba	100	38.916
ENSLBEG00000027539	-	70	44.444	ENSLBEG00000026989	RAB15	72	44.444
ENSLBEG00000027539	-	68	37.086	ENSLBEG00000026006	rab34a	56	37.086
ENSLBEG00000027539	-	78	33.333	ENSLBEG00000019137	rhebl1	87	33.333
ENSLBEG00000027539	-	77	41.040	ENSLBEG00000027781	rab1ab	85	41.040
ENSLBEG00000027539	-	73	44.025	ENSLBEG00000013463	rab15	74	44.025
ENSLBEG00000027539	-	82	33.333	ENSLBEG00000000119	rras2	90	34.392
ENSLBEG00000027539	-	73	45.912	ENSLBEG00000015248	rab11bb	72	45.912
ENSLBEG00000027539	-	73	44.099	ENSLBEG00000022630	-	75	44.099
ENSLBEG00000027539	-	86	39.801	ENSLBEG00000004172	-	92	39.801
ENSLBEG00000027539	-	86	37.374	ENSLBEG00000014427	rab33a	86	37.374
ENSLBEG00000027539	-	78	31.765	ENSLBEG00000003644	rabl2	72	31.765
ENSLBEG00000027539	-	86	40.704	ENSLBEG00000026857	rab11a	92	40.704
ENSLBEG00000027539	-	66	39.041	ENSLBEG00000027819	rab34b	72	39.041
ENSLBEG00000027539	-	65	37.415	ENSLBEG00000014885	rheb	77	37.415
ENSLBEG00000027539	-	87	38.860	ENSLBEG00000010408	-	87	38.860
ENSLBEG00000027539	-	73	42.236	ENSLBEG00000001313	RAB39B	75	42.236
ENSLBEG00000027539	-	93	39.423	ENSLBEG00000002516	rab5aa	92	39.423
ENSLBEG00000027539	-	72	42.038	ENSLBEG00000001618	rab35b	95	37.500
ENSLBEG00000027539	-	73	32.184	ENSLBEG00000016218	rasl11a	64	32.184
ENSLBEG00000027539	-	76	44.242	ENSLBEG00000019435	rab14	76	44.242
ENSLBEG00000027539	-	80	42.614	ENSLBEG00000005861	rab18a	80	42.614
ENSLBEG00000027539	-	86	33.503	ENSLBEG00000001796	RAB7A	95	33.503
ENSLBEG00000027539	-	73	44.025	ENSLBEG00000026930	rab6ba	76	44.025
ENSLBEG00000027539	-	80	30.055	ENSLBEG00000005018	rab32b	85	30.055

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027539	-	94	76.887	ENSG00000172794	RAB37	98	81.461	Homo_sapiens
ENSLBEG00000027539	-	88	86.458	ENSACIG00000023222	-	84	86.458	Amphilophus_citrinellus
ENSLBEG00000027539	-	88	82.199	ENSCPOG00000025645	RAB37	88	82.199	Cavia_porcellus
ENSLBEG00000027539	-	90	78.431	ENSCLAG00000008913	RAB37	94	78.431	Chinchilla_lanigera
ENSLBEG00000027539	-	88	92.188	ENSCVAG00000014416	-	91	92.188	Cyprinodon_variegatus
ENSLBEG00000027539	-	94	77.512	ENSELUG00000023120	-	99	77.512	Esox_lucius
ENSLBEG00000027539	-	91	77.670	ENSFDAG00000015285	RAB37	95	77.670	Fukomys_damarensis
ENSLBEG00000027539	-	88	90.104	ENSGAFG00000014730	-	95	90.104	Gambusia_affinis
ENSLBEG00000027539	-	90	78.431	ENSHGLG00000004384	RAB37	94	78.431	Heterocephalus_glaber_female
ENSLBEG00000027539	-	90	78.431	ENSHGLG00100012557	-	94	78.431	Heterocephalus_glaber_male
ENSLBEG00000027539	-	72	96.203	ENSMAMG00000020286	-	76	96.203	Mastacembelus_armatus
ENSLBEG00000027539	-	94	76.777	MGP_CAROLIEiJ_G0017386	Rab37	98	76.777	Mus_caroli
ENSLBEG00000027539	-	94	76.777	ENSMUSG00000020732	Rab37	98	76.777	Mus_musculus
ENSLBEG00000027539	-	94	76.777	MGP_PahariEiJ_G0018517	Rab37	98	76.777	Mus_pahari
ENSLBEG00000027539	-	94	76.777	MGP_SPRETEiJ_G0018231	Rab37	98	76.777	Mus_spretus
ENSLBEG00000027539	-	88	73.980	ENSNBRG00000011872	-	91	73.980	Neolamprologus_brichardi
ENSLBEG00000027539	-	88	91.146	ENSORLG00000024558	-	79	91.146	Oryzias_latipes
ENSLBEG00000027539	-	88	91.146	ENSORLG00020015717	-	79	91.146	Oryzias_latipes_hni
ENSLBEG00000027539	-	94	87.379	ENSORLG00015013564	-	99	89.447	Oryzias_latipes_hsok
ENSLBEG00000027539	-	88	91.667	ENSOMEG00000018494	-	79	91.667	Oryzias_melastigma
ENSLBEG00000027539	-	88	81.771	ENSPCIG00000004450	-	88	81.771	Phascolarctos_cinereus
ENSLBEG00000027539	-	88	93.229	ENSPFOG00000019144	-	79	93.229	Poecilia_formosa
ENSLBEG00000027539	-	88	93.229	ENSPFOG00000006314	-	79	93.229	Poecilia_formosa
ENSLBEG00000027539	-	88	92.708	ENSPMEG00000002564	-	79	92.708	Poecilia_mexicana
ENSLBEG00000027539	-	88	92.708	ENSPMEG00000017161	-	79	92.708	Poecilia_mexicana
ENSLBEG00000027539	-	90	69.608	ENSPPYG00000008601	-	94	69.608	Pongo_abelii
ENSLBEG00000027539	-	88	83.246	ENSPNAG00000021675	-	89	83.246	Pygocentrus_nattereri
ENSLBEG00000027539	-	95	87.143	ENSXMAG00000021303	-	87	87.143	Xiphophorus_maculatus