EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSLBEG00000027652 (Gene tree)
Gene ID
109980738
Gene Symbol
polr2a
Alias
im:7136071
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Labrus_bergylta
Status
putative
Strand
Minus strand
Length
13623 bases
Position
chrFKLU01000024.1:526090-539712
Accession
109980738
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSLBEP00000037075RNA_pol_Rpb1_5PF04998.172.4e-10111
ENSLBEP00000037047RNA_pol_Rpb1_5PF04998.172.5e-10111
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-29131
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-29231
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-29331
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-29431
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-29531
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-29631
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-29731
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-29831
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-29931
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291031
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291131
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291231
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291331
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291431
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291531
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291631
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291731
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291831
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-291931
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292031
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292131
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292231
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292331
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292431
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292531
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292631
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292731
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292831
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-292931
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-293031
ENSLBEP00000037075RNA_pol_Rpb1_RPF05001.134.4e-293131
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-23132
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-23232
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-23332
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-23432
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-23532
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-23632
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-23732
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-23832
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-23932
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231032
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231132
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231232
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231332
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231432
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231532
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231632
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231732
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231832
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-231932
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232032
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232132
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232232
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232332
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232432
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232532
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232632
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232732
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232832
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-232932
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-233032
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-233132
ENSLBEP00000037047RNA_pol_Rpb1_RPF05001.131.2e-233232
ENSLBEP00000037075RNA_pol_Rpb1_4PF05000.171.4e-3711
ENSLBEP00000037047RNA_pol_Rpb1_4PF05000.171.4e-3711
ENSLBEP00000037075RNA_pol_Rpb1_2PF00623.206.5e-7511
ENSLBEP00000037047RNA_pol_Rpb1_2PF00623.206.8e-7511
ENSLBEP00000037075RNA_pol_Rpb1_3PF04983.183e-5011
ENSLBEP00000037047RNA_pol_Rpb1_3PF04983.183.2e-5011
ENSLBEP00000037075RNA_pol_Rpb1_1PF04997.124e-10811
ENSLBEP00000037047RNA_pol_Rpb1_1PF04997.124.1e-10811
ENSLBEP00000037075RNA_pol_Rpb1_7PF04990.127.2e-5511
ENSLBEP00000037047RNA_pol_Rpb1_7PF04990.127.4e-5511
ENSLBEP00000037075RNA_pol_Rpb1_6PF04992.142.2e-6511
ENSLBEP00000037047RNA_pol_Rpb1_6PF04992.142.3e-6511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSLBET00000038612-5784-ENSLBEP000000370751927 (aa)--
ENSLBET00000038584-9063XM_020629237ENSLBEP000000370471965 (aa)XP_020484893UPI0009B474AF
Gene Model
Click here to download ENSLBEG00000027652's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027652's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSLBEG00000027652polr2a6839.054ENSLBEG00000017214polr3a9138.717
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSLBEG00000027652polr2a8798.697ENSAPOG00000006552polr2a9098.697Acanthochromis_polyacanthus
ENSLBEG00000027652polr2a8293.804ENSAMEG00000016265-8293.812Ailuropoda_melanoleuca
ENSLBEG00000027652polr2a10098.443ENSACIG00000015982polr2a9998.443Amphilophus_citrinellus
ENSLBEG00000027652polr2a10096.769ENSAOCG00000004255polr2a9994.966Amphiprion_ocellaris
ENSLBEG00000027652polr2a10099.033ENSAPEG00000012623polr2a9999.033Amphiprion_percula
ENSLBEG00000027652polr2a10098.524ENSATEG00000019644polr2a9998.524Anabas_testudineus
ENSLBEG00000027652polr2a8294.596ENSACAG00000014561POLR2A8294.603Anolis_carolinensis
ENSLBEG00000027652polr2a8294.342ENSANAG00000020093-8294.349Aotus_nancymaae
ENSLBEG00000027652polr2a10098.219ENSACLG00000006735polr2a9998.219Astatotilapia_calliptera
ENSLBEG00000027652polr2a10097.769ENSAMXG00000020046polr2a9997.769Astyanax_mexicanus
ENSLBEG00000027652polr2a8294.165ENSBTAG00000046765POLR2A8294.172Bos_taurus
ENSLBEG00000027652polr2a9971.429WBGene00000123ama-19979.612Caenorhabditis_elegans
ENSLBEG00000027652polr2a8694.103ENSCAFG00000016532POLR2A9994.110Canis_familiaris
ENSLBEG00000027652polr2a8293.579ENSCAFG00020007929-8293.247Canis_lupus_dingo
ENSLBEG00000027652polr2a8294.165ENSCHIG00000027173-8294.172Capra_hircus
ENSLBEG00000027652polr2a9291.859ENSTSYG00000012803-8591.460Carlito_syrichta
ENSLBEG00000027652polr2a9990.717ENSCAPG00000001882-10093.236Cavia_aperea
ENSLBEG00000027652polr2a10088.604ENSCPOG00000014812-10092.994Cavia_porcellus
ENSLBEG00000027652polr2a8294.342ENSCCAG00000020938-8294.349Cebus_capucinus
ENSLBEG00000027652polr2a8294.165ENSCATG00000013680-8294.172Cercocebus_atys
ENSLBEG00000027652polr2a8294.215ENSCLAG00000012196-8294.222Chinchilla_lanigera
ENSLBEG00000027652polr2a8285.379ENSCSAG00000011644-8285.397Chlorocebus_sabaeus
ENSLBEG00000027652polr2a9582.976ENSCPBG00000012697POLR2A9985.705Chrysemys_picta_bellii
ENSLBEG00000027652polr2a9876.671ENSCING00000007884-9977.228Ciona_intestinalis
ENSLBEG00000027652polr2a9879.630ENSCSAVG00000008334-9981.731Ciona_savignyi
ENSLBEG00000027652polr2a8293.482ENSCANG00000010622-8293.490Colobus_angolensis_palliatus
ENSLBEG00000027652polr2a8289.065ENSCGRG00001003538Polr2a8189.079Cricetulus_griseus_chok1gshd
ENSLBEG00000027652polr2a8290.643ENSCGRG00000012105Polr2a9390.441Cricetulus_griseus_crigri
ENSLBEG00000027652polr2a10097.769ENSCSEG00000002635polr2a10097.769Cynoglossus_semilaevis
ENSLBEG00000027652polr2a10098.422ENSCVAG00000005156polr2a9998.422Cyprinodon_variegatus
ENSLBEG00000027652polr2a10097.101ENSDARG00000099966polr2a9997.101Danio_rerio
ENSLBEG00000027652polr2a8291.496ENSDNOG00000016482-8291.507Dasypus_novemcinctus
ENSLBEG00000027652polr2a8294.342ENSDORG00000008667Polr2a8294.349Dipodomys_ordii
ENSLBEG00000027652polr2a9969.884FBgn0003277RpII2159974.159Drosophila_melanogaster
ENSLBEG00000027652polr2a9489.837ENSETEG00000002540-8790.925Echinops_telfairi
ENSLBEG00000027652polr2a8287.274ENSEBUG00000013967polr2a8287.259Eptatretus_burgeri
ENSLBEG00000027652polr2a8292.244ENSEASG00005019114-8392.126Equus_asinus_asinus
ENSLBEG00000027652polr2a8294.165ENSECAG00000018485POLR2A8294.172Equus_caballus
ENSLBEG00000027652polr2a8594.059ENSEEUG00000001154-9594.059Erinaceus_europaeus
ENSLBEG00000027652polr2a8895.394ENSELUG00000014284polr2a8495.394Esox_lucius
ENSLBEG00000027652polr2a8294.227ENSFDAG00000008287-8294.234Fukomys_damarensis
ENSLBEG00000027652polr2a9998.017ENSFHEG00000001768polr2a10098.017Fundulus_heteroclitus
ENSLBEG00000027652polr2a9993.072ENSGMOG00000007725polr2a10093.099Gadus_morhua
ENSLBEG00000027652polr2a99100.000ENSGAFG00000005389polr2a9995.099Gambusia_affinis
ENSLBEG00000027652polr2a9995.042ENSGACG00000019366polr2a10094.827Gasterosteus_aculeatus
ENSLBEG00000027652polr2a8292.074ENSGGOG00000014800-9692.893Gorilla_gorilla
ENSLBEG00000027652polr2a9998.164ENSHBUG00000018937polr2a10098.164Haplochromis_burtoni
ENSLBEG00000027652polr2a8294.406ENSHGLG00000012381POLR2A8294.413Heterocephalus_glaber_female
ENSLBEG00000027652polr2a8294.406ENSHGLG00100014843POLR2A8294.413Heterocephalus_glaber_male
ENSLBEG00000027652polr2a10098.015ENSHCOG00000011874polr2a9998.015Hippocampus_comes
ENSLBEG00000027652polr2a10097.353ENSIPUG00000002613Polr2a9997.353Ictalurus_punctatus
ENSLBEG00000027652polr2a8294.342ENSSTOG00000001304-8294.349Ictidomys_tridecemlineatus
ENSLBEG00000027652polr2a8294.342ENSJJAG00000013049Polr2a8294.349Jaculus_jaculus
ENSLBEG00000027652polr2a82100.000ENSKMAG00000016343polr2a86100.000Kryptolebias_marmoratus
ENSLBEG00000027652polr2a8085.452ENSLACG00000012071POLR2A8185.525Latimeria_chalumnae
ENSLBEG00000027652polr2a9096.849ENSLOCG00000013863polr2a9796.400Lepisosteus_oculatus
ENSLBEG00000027652polr2a10090.953ENSLAFG00000008626-9794.172Loxodonta_africana
ENSLBEG00000027652polr2a5193.156ENSMFAG00000007042-9993.156Macaca_fascicularis
ENSLBEG00000027652polr2a8294.342ENSMMUG00000023620-9194.172Macaca_mulatta
ENSLBEG00000027652polr2a8293.897ENSMNEG00000040407-8293.738Macaca_nemestrina
ENSLBEG00000027652polr2a8089.818ENSMLEG00000030263-9993.156Mandrillus_leucophaeus
ENSLBEG00000027652polr2a10098.626ENSMAMG00000003351polr2a9998.626Mastacembelus_armatus
ENSLBEG00000027652polr2a10098.219ENSMZEG00005021429polr2a9998.219Maylandia_zebra
ENSLBEG00000027652polr2a5194.088ENSMAUG00000021055-9994.088Mesocricetus_auratus
ENSLBEG00000027652polr2a8294.103ENSMICG00000013372-9893.552Microcebus_murinus
ENSLBEG00000027652polr2a9991.878ENSMOCG00000018279Polr2a10091.888Microtus_ochrogaster
ENSLBEG00000027652polr2a9097.705ENSMMOG00000012515polr2a9297.705Mola_mola
ENSLBEG00000027652polr2a8294.041ENSMODG00000007009-8294.048Monodelphis_domestica
ENSLBEG00000027652polr2a9495.167ENSMALG00000008716polr2a9498.158Monopterus_albus
ENSLBEG00000027652polr2a8294.342MGP_CAROLIEiJ_G0016587Polr2a8294.349Mus_caroli
ENSLBEG00000027652polr2a8294.342ENSMUSG00000005198Polr2a8294.349Mus_musculus
ENSLBEG00000027652polr2a8292.027MGP_PahariEiJ_G0017718Polr2a8292.037Mus_pahari
ENSLBEG00000027652polr2a8294.342MGP_SPRETEiJ_G0017423Polr2a8294.349Mus_spretus
ENSLBEG00000027652polr2a8294.165ENSMPUG00000009648-8294.172Mustela_putorius_furo
ENSLBEG00000027652polr2a8293.676ENSMLUG00000009088-8293.684Myotis_lucifugus
ENSLBEG00000027652polr2a8294.342ENSNGAG00000002543Polr2a8294.349Nannospalax_galili
ENSLBEG00000027652polr2a10098.443ENSNBRG00000002005polr2a9998.443Neolamprologus_brichardi
ENSLBEG00000027652polr2a8294.342ENSNLEG00000009460-8294.349Nomascus_leucogenys
ENSLBEG00000027652polr2a9495.207ENSMEUG00000008611-9686.515Notamacropus_eugenii
ENSLBEG00000027652polr2a8093.872ENSOPRG00000015116-9993.872Ochotona_princeps
ENSLBEG00000027652polr2a8794.055ENSODEG00000017674-8589.704Octodon_degus
ENSLBEG00000027652polr2a10098.473ENSONIG00000009231polr2a9998.473Oreochromis_niloticus
ENSLBEG00000027652polr2a9990.460ENSOCUG00000017929-10094.048Oryctolagus_cuniculus
ENSLBEG00000027652polr2a10098.236ENSORLG00000006431polr2a9998.236Oryzias_latipes
ENSLBEG00000027652polr2a10098.236ENSORLG00020010235polr2a9998.236Oryzias_latipes_hni
ENSLBEG00000027652polr2a10098.184ENSORLG00015007075polr2a9998.184Oryzias_latipes_hsok
ENSLBEG00000027652polr2a9995.520ENSOMEG00000010713polr2a10097.884Oryzias_melastigma
ENSLBEG00000027652polr2a8294.165ENSOGAG00000033608-8294.172Otolemur_garnettii
ENSLBEG00000027652polr2a9194.165ENSOARG00000013874-9091.445Ovis_aries
ENSLBEG00000027652polr2a8194.242ENSPPAG00000043734-8989.908Pan_paniscus
ENSLBEG00000027652polr2a8294.342ENSPTRG00000008691POLR2A8294.349Pan_troglodytes
ENSLBEG00000027652polr2a8293.643ENSPANG00000024099-8293.651Papio_anubis
ENSLBEG00000027652polr2a7795.287ENSPKIG00000005727polr2a8595.287Paramormyrops_kingsleyae
ENSLBEG00000027652polr2a9892.649ENSPSIG00000014006POLR2A10092.565Pelodiscus_sinensis
ENSLBEG00000027652polr2a10097.696ENSPMGG00000019734polr2a9997.696Periophthalmus_magnuspinnatus
ENSLBEG00000027652polr2a8294.342ENSPEMG00000012521Polr2a8294.349Peromyscus_maniculatus_bairdii
ENSLBEG00000027652polr2a8694.045ENSPCIG00000028851-8294.045Phascolarctos_cinereus
ENSLBEG00000027652polr2a9998.311ENSPFOG00000007890polr2a9998.311Poecilia_formosa
ENSLBEG00000027652polr2a9998.311ENSPLAG00000007399polr2a9998.311Poecilia_latipinna
ENSLBEG00000027652polr2a10098.331ENSPMEG00000002071polr2a9998.331Poecilia_mexicana
ENSLBEG00000027652polr2a10098.339ENSPREG00000013122polr2a9998.339Poecilia_reticulata
ENSLBEG00000027652polr2a8294.165ENSPPYG00000007924-8294.172Pongo_abelii
ENSLBEG00000027652polr2a7495.132ENSPCAG00000006951-7495.132Procavia_capensis
ENSLBEG00000027652polr2a8294.342ENSPCOG00000025260-8294.349Propithecus_coquereli
ENSLBEG00000027652polr2a8293.855ENSPVAG00000005069-8293.862Pteropus_vampyrus
ENSLBEG00000027652polr2a10098.270ENSPNYG00000022340polr2a9998.270Pundamilia_nyererei
ENSLBEG00000027652polr2a10097.710ENSPNAG00000011237polr2a9997.710Pygocentrus_nattereri
ENSLBEG00000027652polr2a8294.103ENSRNOG00000028834Polr2a8294.110Rattus_norvegicus
ENSLBEG00000027652polr2a8294.342ENSRBIG00000002471-9193.800Rhinopithecus_bieti
ENSLBEG00000027652polr2a8294.165ENSRROG00000029583-8993.304Rhinopithecus_roxellana
ENSLBEG00000027652polr2a8450.338YDL140CRPO219983.544Saccharomyces_cerevisiae
ENSLBEG00000027652polr2a8294.342ENSSBOG00000000808-8294.349Saimiri_boliviensis_boliviensis
ENSLBEG00000027652polr2a9394.041ENSSHAG00000002858-8494.048Sarcophilus_harrisii
ENSLBEG00000027652polr2a10097.254ENSSFOG00015023275polr2a10097.254Scleropages_formosus
ENSLBEG00000027652polr2a10096.132ENSSMAG00000009137polr2a9995.623Scophthalmus_maximus
ENSLBEG00000027652polr2a10098.779ENSSDUG00000020466polr2a9998.779Seriola_dumerili
ENSLBEG00000027652polr2a10098.830ENSSLDG00000020613polr2a9998.830Seriola_lalandi_dorsalis
ENSLBEG00000027652polr2a9590.012ENSSARG00000005875-9990.830Sorex_araneus
ENSLBEG00000027652polr2a100100.000ENSSPAG00000016741polr2a95100.000Stegastes_partitus
ENSLBEG00000027652polr2a8293.234ENSSSCG00000028278-8293.242Sus_scrofa
ENSLBEG00000027652polr2a9892.511ENSTRUG00000012320polr2a8192.436Takifugu_rubripes
ENSLBEG00000027652polr2a9296.588ENSTNIG00000010136polr2a10096.588Tetraodon_nigroviridis
ENSLBEG00000027652polr2a7694.898ENSTBEG00000013294-5894.898Tupaia_belangeri
ENSLBEG00000027652polr2a8292.489ENSTTRG00000014273-8292.498Tursiops_truncatus
ENSLBEG00000027652polr2a9393.912ENSUAMG00000014866-10091.218Ursus_americanus
ENSLBEG00000027652polr2a7491.446ENSUMAG00000015732-8391.061Ursus_maritimus
ENSLBEG00000027652polr2a6598.370ENSVPAG00000008842-7698.370Vicugna_pacos
ENSLBEG00000027652polr2a8294.103ENSVVUG00000027878-8394.110Vulpes_vulpes
ENSLBEG00000027652polr2a8194.021ENSXETG00000012465polr2a8294.029Xenopus_tropicalis
ENSLBEG00000027652polr2a9697.466ENSXCOG00000001804polr2a9997.466Xiphophorus_couchianus
ENSLBEG00000027652polr2a10098.339ENSXMAG00000015687polr2a9998.339Xiphophorus_maculatus

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