EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027691 (Gene tree)
Gene ID: -
Gene Symbol: RAB17
Alias: -
Full Name: ras-related protein Rab-17-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 6379 bases
Position: chrFKLU01000056.1:1326591-1332969
Accession: 109983496
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037079	MMR_HSR1	PF01926.23	5.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038616	RAB17-201	693	XM_020633218	ENSLBEP00000037079	230 (aa)	XP_020488874	-

Gene Model

Click here to download ENSLBEG00000027691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027691	RAB17	72	34.911	ENSLBEG00000003644	rabl2	71	34.911
ENSLBEG00000027691	RAB17	68	35.032	ENSLBEG00000001618	rab35b	85	34.091
ENSLBEG00000027691	RAB17	76	32.000	ENSLBEG00000027226	-	73	32.000
ENSLBEG00000027691	RAB17	73	35.882	ENSLBEG00000019428	rab18b	81	35.882
ENSLBEG00000027691	RAB17	73	31.579	ENSLBEG00000001313	RAB39B	79	31.579
ENSLBEG00000027691	RAB17	76	30.000	ENSLBEG00000016218	rasl11a	72	30.000
ENSLBEG00000027691	RAB17	76	35.795	ENSLBEG00000026790	-	79	35.795
ENSLBEG00000027691	RAB17	63	32.215	ENSLBEG00000018063	-	62	32.215
ENSLBEG00000027691	RAB17	79	38.947	ENSLBEG00000004172	-	82	38.947
ENSLBEG00000027691	RAB17	74	32.584	ENSLBEG00000002926	si:dkey-34d22.5	79	32.584
ENSLBEG00000027691	RAB17	72	43.976	ENSLBEG00000002516	rab5aa	72	43.976
ENSLBEG00000027691	RAB17	79	38.421	ENSLBEG00000006087	rab11ba	82	38.421
ENSLBEG00000027691	RAB17	72	43.976	ENSLBEG00000004128	rab5c	90	38.679
ENSLBEG00000027691	RAB17	78	36.022	ENSLBEG00000003235	rab22a	91	36.022
ENSLBEG00000027691	RAB17	88	40.580	ENSLBEG00000010408	-	90	41.346
ENSLBEG00000027691	RAB17	87	35.714	ENSLBEG00000016417	rab11al	94	35.714
ENSLBEG00000027691	RAB17	70	42.941	ENSLBEG00000002367	rab25a	76	42.941
ENSLBEG00000027691	RAB17	83	36.923	ENSLBEG00000026857	rab11a	85	36.923
ENSLBEG00000027691	RAB17	88	38.725	ENSLBEG00000016446	rab25b	96	38.725
ENSLBEG00000027691	RAB17	70	30.539	ENSLBEG00000028391	dnajc27	59	30.539
ENSLBEG00000027691	RAB17	63	33.333	ENSLBEG00000027819	rab34b	71	33.333
ENSLBEG00000027691	RAB17	73	35.882	ENSLBEG00000005861	rab18a	78	35.882
ENSLBEG00000027691	RAB17	79	31.522	ENSLBEG00000013756	rab12	74	31.522
ENSLBEG00000027691	RAB17	79	34.737	ENSLBEG00000005981	-	81	34.737
ENSLBEG00000027691	RAB17	70	37.576	ENSLBEG00000019372	rab6bb	76	37.576
ENSLBEG00000027691	RAB17	77	34.973	ENSLBEG00000027539	-	82	34.973
ENSLBEG00000027691	RAB17	70	35.802	ENSLBEG00000001146	rab30	77	35.802
ENSLBEG00000027691	RAB17	71	31.325	ENSLBEG00000022630	-	76	31.325
ENSLBEG00000027691	RAB17	71	34.146	ENSLBEG00000013463	rab15	75	34.146
ENSLBEG00000027691	RAB17	71	33.939	ENSLBEG00000007681	si:dkey-16l2.16	95	31.220
ENSLBEG00000027691	RAB17	55	31.111	ENSLBEG00000012677	arl4cb	68	31.111
ENSLBEG00000027691	RAB17	64	33.113	ENSLBEG00000001193	rab42a	68	33.113
ENSLBEG00000027691	RAB17	64	36.242	ENSLBEG00000026989	RAB15	68	36.242
ENSLBEG00000027691	RAB17	76	35.795	ENSLBEG00000019435	rab14	79	35.795
ENSLBEG00000027691	RAB17	70	38.415	ENSLBEG00000008746	RAB41	75	38.415
ENSLBEG00000027691	RAB17	53	36.508	ENSLBEG00000014427	rab33a	55	36.290
ENSLBEG00000027691	RAB17	70	37.576	ENSLBEG00000026930	rab6ba	76	37.576
ENSLBEG00000027691	RAB17	70	38.788	ENSLBEG00000003748	rab6a	76	38.788
ENSLBEG00000027691	RAB17	86	31.658	ENSLBEG00000027781	rab1ab	95	31.658
ENSLBEG00000027691	RAB17	66	32.680	ENSLBEG00000027628	si:cabz01085950.1	74	32.680
ENSLBEG00000027691	RAB17	73	30.409	ENSLBEG00000013176	rab23	77	30.319
ENSLBEG00000027691	RAB17	84	33.503	ENSLBEG00000020796	rab2a	92	33.500
ENSLBEG00000027691	RAB17	76	32.571	ENSLBEG00000005791	-	80	32.571
ENSLBEG00000027691	RAB17	86	30.151	ENSLBEG00000021040	rab1ba	96	30.151
ENSLBEG00000027691	RAB17	71	36.585	ENSLBEG00000003101	rab4a	75	36.585
ENSLBEG00000027691	RAB17	86	31.156	ENSLBEG00000028426	RAB1A	96	31.156
ENSLBEG00000027691	RAB17	79	38.947	ENSLBEG00000015248	rab11bb	82	38.947
ENSLBEG00000027691	RAB17	75	36.782	ENSLBEG00000026779	rab13	85	36.782
ENSLBEG00000027691	RAB17	71	30.769	ENSLBEG00000026777	rab33ba	72	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027691	RAB17	93	69.484	ENSACIG00000006949	RAB17	92	69.484	Amphilophus_citrinellus
ENSLBEG00000027691	RAB17	92	70.755	ENSAOCG00000009167	-	92	70.755	Amphiprion_ocellaris
ENSLBEG00000027691	RAB17	92	70.283	ENSAPEG00000002915	RAB17	92	70.283	Amphiprion_percula
ENSLBEG00000027691	RAB17	71	50.610	ENSACAG00000004554	RAB17	72	50.610	Anolis_carolinensis
ENSLBEG00000027691	RAB17	96	66.063	ENSACLG00000001218	RAB17	96	66.063	Astatotilapia_calliptera
ENSLBEG00000027691	RAB17	72	47.904	ENSFCAG00000012724	RAB17	77	47.904	Felis_catus
ENSLBEG00000027691	RAB17	87	42.157	ENSFALG00000012783	RAB17	90	42.157	Ficedula_albicollis
ENSLBEG00000027691	RAB17	87	44.279	ENSGALG00000003899	RAB17	91	44.279	Gallus_gallus
ENSLBEG00000027691	RAB17	96	66.516	ENSHBUG00000001462	RAB17	96	66.516	Haplochromis_burtoni
ENSLBEG00000027691	RAB17	96	66.516	ENSMZEG00005013677	RAB17	96	66.516	Maylandia_zebra
ENSLBEG00000027691	RAB17	87	44.279	ENSMGAG00000003135	RAB17	89	44.279	Meleagris_gallopavo
ENSLBEG00000027691	RAB17	81	42.021	ENSMOCG00000006448	Rab17	86	42.021	Microtus_ochrogaster
ENSLBEG00000027691	RAB17	90	75.362	ENSMMOG00000019258	RAB17	89	75.362	Mola_mola
ENSLBEG00000027691	RAB17	86	43.216	ENSMODG00000008949	RAB17	90	43.216	Monodelphis_domestica
ENSLBEG00000027691	RAB17	92	58.768	ENSMALG00000007905	RAB17	85	58.768	Monopterus_albus
ENSLBEG00000027691	RAB17	90	69.082	ENSNBRG00000017793	RAB17	91	69.082	Neolamprologus_brichardi
ENSLBEG00000027691	RAB17	67	49.351	ENSMEUG00000005002	RAB17	86	49.351	Notamacropus_eugenii
ENSLBEG00000027691	RAB17	92	69.340	ENSONIG00000016776	RAB17	92	69.340	Oreochromis_niloticus
ENSLBEG00000027691	RAB17	71	47.561	ENSPPRG00000003974	RAB17	75	47.561	Panthera_pardus
ENSLBEG00000027691	RAB17	71	46.626	ENSPTIG00000014452	RAB17	75	46.626	Panthera_tigris_altaica
ENSLBEG00000027691	RAB17	70	48.447	ENSPSIG00000016995	RAB17	66	48.447	Pelodiscus_sinensis
ENSLBEG00000027691	RAB17	80	45.161	ENSPCIG00000021558	-	62	45.161	Phascolarctos_cinereus
ENSLBEG00000027691	RAB17	96	66.516	ENSPNYG00000011135	RAB17	96	66.516	Pundamilia_nyererei
ENSLBEG00000027691	RAB17	86	43.216	ENSSHAG00000009306	RAB17	90	43.216	Sarcophilus_harrisii
ENSLBEG00000027691	RAB17	90	72.947	ENSSDUG00000006618	RAB17	89	72.947	Seriola_dumerili
ENSLBEG00000027691	RAB17	92	71.698	ENSSLDG00000020918	RAB17	92	71.698	Seriola_lalandi_dorsalis
ENSLBEG00000027691	RAB17	59	51.471	ENSSPUG00000015409	RAB17	61	51.471	Sphenodon_punctatus
ENSLBEG00000027691	RAB17	92	68.246	ENSSPAG00000022624	-	93	68.246	Stegastes_partitus
ENSLBEG00000027691	RAB17	86	43.939	ENSTGUG00000003786	RAB17	91	43.939	Taeniopygia_guttata