EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027731 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3613 bases
Position: chrFKLU01000414.1:310334-313946
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037135	RRM_1	PF00076.22	7.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038672	-	372	-	ENSLBEP00000037135	123 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000027731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027731's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027731	-	61	36.000	ENSLBEG00000017163	-	56	38.235
ENSLBEG00000027731	-	62	43.103	ENSLBEG00000006362	-	69	39.474
ENSLBEG00000027731	-	70	77.907	ENSLBEG00000000292	cirbpa	72	69.231
ENSLBEG00000027731	-	78	37.500	ENSLBEG00000008073	elavl3	65	36.986
ENSLBEG00000027731	-	67	36.111	ENSLBEG00000021924	elavl1a	67	36.111
ENSLBEG00000027731	-	59	36.111	ENSLBEG00000015023	elavl4	63	36.111
ENSLBEG00000027731	-	78	34.247	ENSLBEG00000027924	ELAVL2	63	34.247
ENSLBEG00000027731	-	60	35.135	ENSLBEG00000005593	-	60	35.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027731	-	73	81.111	ENSAPOG00000004458	cirbpa	59	76.364	Acanthochromis_polyacanthus
ENSLBEG00000027731	-	66	83.951	ENSACIG00000016116	cirbpa	61	79.817	Amphilophus_citrinellus
ENSLBEG00000027731	-	66	83.951	ENSAOCG00000016212	cirbpa	63	71.795	Amphiprion_ocellaris
ENSLBEG00000027731	-	66	83.951	ENSAPEG00000011989	cirbpa	64	71.795	Amphiprion_percula
ENSLBEG00000027731	-	78	78.125	ENSATEG00000014985	cirbpa	60	79.091	Anabas_testudineus
ENSLBEG00000027731	-	66	83.951	ENSACLG00000002094	-	61	79.817	Astatotilapia_calliptera
ENSLBEG00000027731	-	67	67.470	ENSAMXG00000002894	cirbpa	54	65.882	Astyanax_mexicanus
ENSLBEG00000027731	-	82	70.297	ENSCSEG00000014344	cirbpa	58	67.857	Cynoglossus_semilaevis
ENSLBEG00000027731	-	76	78.723	ENSCVAG00000004853	cirbpa	64	70.940	Cyprinodon_variegatus
ENSLBEG00000027731	-	67	75.904	ENSDARG00000013351	cirbpb	65	65.833	Danio_rerio
ENSLBEG00000027731	-	67	72.289	ENSELUG00000004675	-	58	69.412	Esox_lucius
ENSLBEG00000027731	-	66	85.185	ENSFHEG00000002580	cirbpa	51	83.529	Fundulus_heteroclitus
ENSLBEG00000027731	-	66	83.951	ENSHBUG00000022060	cirbpa	65	75.424	Haplochromis_burtoni
ENSLBEG00000027731	-	66	82.716	ENSHCOG00000001170	cirbpa	69	83.133	Hippocampus_comes
ENSLBEG00000027731	-	67	74.699	ENSIPUG00000000698	cirbpb	60	65.289	Ictalurus_punctatus
ENSLBEG00000027731	-	66	82.716	ENSMAMG00000010168	cirbpa	60	78.182	Mastacembelus_armatus
ENSLBEG00000027731	-	66	83.951	ENSMZEG00005025577	-	65	75.424	Maylandia_zebra
ENSLBEG00000027731	-	57	81.429	ENSMMOG00000010696	cirbpa	84	81.429	Mola_mola
ENSLBEG00000027731	-	66	83.951	ENSNBRG00000019658	cirbpa	65	75.424	Neolamprologus_brichardi
ENSLBEG00000027731	-	66	83.951	ENSONIG00000010169	cirbpa	61	79.817	Oreochromis_niloticus
ENSLBEG00000027731	-	64	86.076	ENSORLG00000015433	cirbpa	65	79.245	Oryzias_latipes
ENSLBEG00000027731	-	64	86.076	ENSORLG00020016909	cirbpa	65	79.245	Oryzias_latipes_hni
ENSLBEG00000027731	-	66	83.951	ENSPNYG00000007198	-	64	75.424	Pundamilia_nyererei
ENSLBEG00000027731	-	67	73.494	ENSPNAG00000019997	cirbpb	60	64.167	Pygocentrus_nattereri
ENSLBEG00000027731	-	80	71.717	ENSSMAG00000002412	cirbpa	59	69.828	Scophthalmus_maximus
ENSLBEG00000027731	-	76	76.596	ENSSLDG00000011320	cirbpa	53	76.364	Seriola_lalandi_dorsalis
ENSLBEG00000027731	-	66	83.951	ENSSPAG00000023037	cirbpa	73	74.790	Stegastes_partitus
ENSLBEG00000027731	-	93	69.231	ENSTRUG00000010187	cirbpa	61	84.337	Takifugu_rubripes
ENSLBEG00000027731	-	76	79.787	ENSXCOG00000008262	cirbpa	92	84.932	Xiphophorus_couchianus