EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000027739 (Gene tree)
Gene ID: 109988785
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10046 bases
Position: chrFKLU01000145.1:84272-94317
Accession: 109988785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037212	DUF382	PF04037.13	1.3e-58	1	1
ENSLBEP00000037187	DUF382	PF04037.13	1.8e-58	1	1
ENSLBEP00000037170	DUF382	PF04037.13	1.9e-58	1	1
ENSLBEP00000037187	SAP	PF02037.27	4.9e-09	1	1
ENSLBEP00000037170	SAP	PF02037.27	5.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038707	-	3116	XM_020640382	ENSLBEP00000037170	876 (aa)	XP_020496038	UPI0009B2ED18
ENSLBET00000038724	-	3065	XM_020640383	ENSLBEP00000037187	859 (aa)	XP_020496039	UPI0009B3F821
ENSLBET00000038750	-	2115	-	ENSLBEP00000037212	704 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000027739's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027739's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027739	sf3b2	88	78.268	ENSG00000087365	SF3B2	99	90.221	Homo_sapiens
ENSLBEG00000027739	sf3b2	97	90.877	ENSAPOG00000001974	sf3b2	96	91.294	Acanthochromis_polyacanthus
ENSLBEG00000027739	sf3b2	88	78.159	ENSAMEG00000017206	SF3B2	97	68.533	Ailuropoda_melanoleuca
ENSLBEG00000027739	sf3b2	100	86.364	ENSACIG00000000624	sf3b2	100	86.023	Amphilophus_citrinellus
ENSLBEG00000027739	sf3b2	100	90.433	ENSAOCG00000009207	sf3b2	100	89.977	Amphiprion_ocellaris
ENSLBEG00000027739	sf3b2	100	90.319	ENSAPEG00000002762	sf3b2	97	90.661	Amphiprion_percula
ENSLBEG00000027739	sf3b2	98	56.299	ENSACAG00000008615	SF3B2	59	70.510	Anolis_carolinensis
ENSLBEG00000027739	sf3b2	88	79.463	ENSANAG00000029120	SF3B2	97	69.326	Aotus_nancymaae
ENSLBEG00000027739	sf3b2	100	89.041	ENSACLG00000014771	sf3b2	100	88.927	Astatotilapia_calliptera
ENSLBEG00000027739	sf3b2	100	76.180	ENSAMXG00000007929	sf3b2	100	76.847	Astyanax_mexicanus
ENSLBEG00000027739	sf3b2	88	78.898	ENSBTAG00000002778	SF3B2	97	68.722	Bos_taurus
ENSLBEG00000027739	sf3b2	76	49.550	WBGene00021004	sftb-2	88	49.538	Caenorhabditis_elegans
ENSLBEG00000027739	sf3b2	88	79.463	ENSCJAG00000001656	SF3B2	97	69.438	Callithrix_jacchus
ENSLBEG00000027739	sf3b2	88	78.125	ENSCAFG00000013033	SF3B2	97	69.213	Canis_familiaris
ENSLBEG00000027739	sf3b2	88	78.125	ENSCAFG00020015382	SF3B2	97	69.213	Canis_lupus_dingo
ENSLBEG00000027739	sf3b2	88	78.898	ENSCHIG00000011211	SF3B2	97	68.687	Capra_hircus
ENSLBEG00000027739	sf3b2	88	79.245	ENSTSYG00000000959	SF3B2	97	69.530	Carlito_syrichta
ENSLBEG00000027739	sf3b2	60	61.574	ENSCAPG00000006065	SF3B2	78	91.525	Cavia_aperea
ENSLBEG00000027739	sf3b2	76	78.545	ENSCPOG00000008294	SF3B2	96	67.261	Cavia_porcellus
ENSLBEG00000027739	sf3b2	88	79.463	ENSCCAG00000035256	SF3B2	97	69.438	Cebus_capucinus
ENSLBEG00000027739	sf3b2	88	78.268	ENSCATG00000042240	SF3B2	97	69.275	Cercocebus_atys
ENSLBEG00000027739	sf3b2	88	79.467	ENSCLAG00000016852	SF3B2	97	68.993	Chinchilla_lanigera
ENSLBEG00000027739	sf3b2	88	78.268	ENSCSAG00000008121	SF3B2	97	68.652	Chlorocebus_sabaeus
ENSLBEG00000027739	sf3b2	89	87.245	ENSCHOG00000001476	SF3B2	90	79.592	Choloepus_hoffmanni
ENSLBEG00000027739	sf3b2	89	79.589	ENSCPBG00000022465	SF3B2	88	79.781	Chrysemys_picta_bellii
ENSLBEG00000027739	sf3b2	74	69.011	ENSCING00000005665	-	100	60.790	Ciona_intestinalis
ENSLBEG00000027739	sf3b2	88	62.158	ENSCSAVG00000002029	-	83	68.451	Ciona_savignyi
ENSLBEG00000027739	sf3b2	88	78.268	ENSCANG00000039680	SF3B2	97	68.843	Colobus_angolensis_palliatus
ENSLBEG00000027739	sf3b2	88	78.438	ENSCGRG00001015741	Sf3b2	97	68.650	Cricetulus_griseus_chok1gshd
ENSLBEG00000027739	sf3b2	88	78.438	ENSCGRG00000018110	Sf3b2	97	70.258	Cricetulus_griseus_crigri
ENSLBEG00000027739	sf3b2	92	79.868	ENSCSEG00000000230	sf3b2	100	75.638	Cynoglossus_semilaevis
ENSLBEG00000027739	sf3b2	100	85.598	ENSCVAG00000003357	sf3b2	100	85.134	Cyprinodon_variegatus
ENSLBEG00000027739	sf3b2	92	79.635	ENSDARG00000018049	sf3b2	99	73.248	Danio_rerio
ENSLBEG00000027739	sf3b2	88	79.463	ENSDNOG00000009484	SF3B2	95	73.698	Dasypus_novemcinctus
ENSLBEG00000027739	sf3b2	88	77.953	ENSDORG00000002495	Sf3b2	97	68.721	Dipodomys_ordii
ENSLBEG00000027739	sf3b2	62	80.876	ENSETEG00000020284	SF3B2	82	80.653	Echinops_telfairi
ENSLBEG00000027739	sf3b2	92	62.385	ENSEBUG00000013703	sf3b2	99	55.970	Eptatretus_burgeri
ENSLBEG00000027739	sf3b2	88	79.467	ENSEASG00005004508	SF3B2	97	68.161	Equus_asinus_asinus
ENSLBEG00000027739	sf3b2	88	79.467	ENSECAG00000024461	SF3B2	97	68.161	Equus_caballus
ENSLBEG00000027739	sf3b2	59	83.333	ENSEEUG00000014278	-	58	83.333	Erinaceus_europaeus
ENSLBEG00000027739	sf3b2	100	79.805	ENSELUG00000005586	sf3b2	100	79.696	Esox_lucius
ENSLBEG00000027739	sf3b2	88	78.281	ENSFCAG00000013289	SF3B2	97	68.958	Felis_catus
ENSLBEG00000027739	sf3b2	90	64.599	ENSFALG00000014653	SF3B2	94	64.441	Ficedula_albicollis
ENSLBEG00000027739	sf3b2	88	78.110	ENSFDAG00000019806	SF3B2	97	68.565	Fukomys_damarensis
ENSLBEG00000027739	sf3b2	100	84.810	ENSFHEG00000020968	sf3b2	100	84.120	Fundulus_heteroclitus
ENSLBEG00000027739	sf3b2	89	84.202	ENSGMOG00000012131	sf3b2	100	87.068	Gadus_morhua
ENSLBEG00000027739	sf3b2	100	85.862	ENSGAFG00000001675	sf3b2	100	84.483	Gambusia_affinis
ENSLBEG00000027739	sf3b2	89	86.321	ENSGACG00000019012	sf3b2	100	92.459	Gasterosteus_aculeatus
ENSLBEG00000027739	sf3b2	89	78.873	ENSGAGG00000023916	SF3B2	98	70.233	Gopherus_agassizii
ENSLBEG00000027739	sf3b2	78	89.859	ENSGGOG00000028448	SF3B2	97	89.859	Gorilla_gorilla
ENSLBEG00000027739	sf3b2	100	88.699	ENSHBUG00000017349	sf3b2	100	88.584	Haplochromis_burtoni
ENSLBEG00000027739	sf3b2	88	79.467	ENSHGLG00000010807	SF3B2	97	68.879	Heterocephalus_glaber_female
ENSLBEG00000027739	sf3b2	88	79.467	ENSHGLG00100006361	SF3B2	97	68.879	Heterocephalus_glaber_male
ENSLBEG00000027739	sf3b2	100	80.931	ENSHCOG00000016203	sf3b2	100	80.091	Hippocampus_comes
ENSLBEG00000027739	sf3b2	100	74.558	ENSIPUG00000009383	sf3b2	100	76.121	Ictalurus_punctatus
ENSLBEG00000027739	sf3b2	88	78.110	ENSSTOG00000028892	SF3B2	97	69.416	Ictidomys_tridecemlineatus
ENSLBEG00000027739	sf3b2	88	78.425	ENSJJAG00000018193	Sf3b2	97	68.607	Jaculus_jaculus
ENSLBEG00000027739	sf3b2	100	83.447	ENSKMAG00000020181	sf3b2	100	82.220	Kryptolebias_marmoratus
ENSLBEG00000027739	sf3b2	89	79.370	ENSLACG00000010429	SF3B2	100	67.618	Latimeria_chalumnae
ENSLBEG00000027739	sf3b2	88	77.812	ENSLAFG00000002128	SF3B2	97	69.711	Loxodonta_africana
ENSLBEG00000027739	sf3b2	88	78.145	ENSMFAG00000003064	SF3B2	97	69.195	Macaca_fascicularis
ENSLBEG00000027739	sf3b2	88	72.913	ENSMMUG00000011743	SF3B2	97	65.247	Macaca_mulatta
ENSLBEG00000027739	sf3b2	88	78.268	ENSMNEG00000034437	SF3B2	97	69.275	Macaca_nemestrina
ENSLBEG00000027739	sf3b2	88	78.268	ENSMLEG00000029373	SF3B2	97	69.310	Mandrillus_leucophaeus
ENSLBEG00000027739	sf3b2	100	90.557	ENSMAMG00000014103	sf3b2	100	90.671	Mastacembelus_armatus
ENSLBEG00000027739	sf3b2	100	89.041	ENSMZEG00005020789	sf3b2	100	88.927	Maylandia_zebra
ENSLBEG00000027739	sf3b2	51	88.674	ENSMAUG00000017040	Sf3b2	93	88.674	Mesocricetus_auratus
ENSLBEG00000027739	sf3b2	88	79.305	ENSMICG00000008565	-	97	69.187	Microcebus_murinus
ENSLBEG00000027739	sf3b2	88	78.199	ENSMICG00000016942	-	97	67.130	Microcebus_murinus
ENSLBEG00000027739	sf3b2	88	78.425	ENSMOCG00000003136	Sf3b2	97	68.879	Microtus_ochrogaster
ENSLBEG00000027739	sf3b2	100	83.599	ENSMMOG00000012928	sf3b2	100	83.238	Mola_mola
ENSLBEG00000027739	sf3b2	89	79.316	ENSMODG00000008490	-	93	74.548	Monodelphis_domestica
ENSLBEG00000027739	sf3b2	75	80.979	ENSMODG00000025020	-	100	73.035	Monodelphis_domestica
ENSLBEG00000027739	sf3b2	100	84.060	ENSMALG00000015137	sf3b2	100	84.404	Monopterus_albus
ENSLBEG00000027739	sf3b2	88	78.425	MGP_CAROLIEiJ_G0022539	Sf3b2	97	67.128	Mus_caroli
ENSLBEG00000027739	sf3b2	88	78.425	ENSMUSG00000024853	Sf3b2	97	68.571	Mus_musculus
ENSLBEG00000027739	sf3b2	88	78.110	MGP_PahariEiJ_G0014036	Sf3b2	97	68.764	Mus_pahari
ENSLBEG00000027739	sf3b2	88	78.425	MGP_SPRETEiJ_G0023453	Sf3b2	97	68.800	Mus_spretus
ENSLBEG00000027739	sf3b2	88	78.125	ENSMPUG00000011349	SF3B2	97	69.213	Mustela_putorius_furo
ENSLBEG00000027739	sf3b2	88	78.268	ENSMLUG00000011136	SF3B2	97	68.498	Myotis_lucifugus
ENSLBEG00000027739	sf3b2	88	78.268	ENSNGAG00000012103	Sf3b2	97	69.266	Nannospalax_galili
ENSLBEG00000027739	sf3b2	88	75.389	ENSNLEG00000006007	SF3B2	97	65.490	Nomascus_leucogenys
ENSLBEG00000027739	sf3b2	78	84.181	ENSMEUG00000000019	SF3B2	91	84.181	Notamacropus_eugenii
ENSLBEG00000027739	sf3b2	88	74.922	ENSODEG00000017764	SF3B2	97	65.865	Octodon_degus
ENSLBEG00000027739	sf3b2	100	88.662	ENSONIG00000013068	sf3b2	100	87.755	Oreochromis_niloticus
ENSLBEG00000027739	sf3b2	88	71.073	ENSOANG00000012482	SF3B2	89	81.262	Ornithorhynchus_anatinus
ENSLBEG00000027739	sf3b2	97	69.425	ENSOCUG00000015722	-	97	68.427	Oryctolagus_cuniculus
ENSLBEG00000027739	sf3b2	60	52.000	ENSOCUG00000024154	-	99	47.122	Oryctolagus_cuniculus
ENSLBEG00000027739	sf3b2	100	84.036	ENSORLG00000008235	sf3b2	97	81.973	Oryzias_latipes
ENSLBEG00000027739	sf3b2	100	84.036	ENSORLG00020005357	sf3b2	100	81.973	Oryzias_latipes_hni
ENSLBEG00000027739	sf3b2	100	84.036	ENSORLG00015022454	sf3b2	94	77.530	Oryzias_latipes_hsok
ENSLBEG00000027739	sf3b2	100	81.642	ENSOMEG00000017480	sf3b2	100	81.952	Oryzias_melastigma
ENSLBEG00000027739	sf3b2	77	84.991	ENSOGAG00000005799	SF3B2	59	87.856	Otolemur_garnettii
ENSLBEG00000027739	sf3b2	88	78.898	ENSOARG00000002125	SF3B2	100	75.100	Ovis_aries
ENSLBEG00000027739	sf3b2	88	78.268	ENSPPAG00000007359	SF3B2	97	68.652	Pan_paniscus
ENSLBEG00000027739	sf3b2	88	78.281	ENSPPRG00000013334	SF3B2	97	68.958	Panthera_pardus
ENSLBEG00000027739	sf3b2	88	78.281	ENSPTIG00000015022	SF3B2	97	68.958	Panthera_tigris_altaica
ENSLBEG00000027739	sf3b2	88	78.268	ENSPTRG00000003912	SF3B2	97	68.652	Pan_troglodytes
ENSLBEG00000027739	sf3b2	88	78.268	ENSPANG00000008593	SF3B2	97	69.275	Papio_anubis
ENSLBEG00000027739	sf3b2	100	78.801	ENSPKIG00000016576	sf3b2	100	79.018	Paramormyrops_kingsleyae
ENSLBEG00000027739	sf3b2	89	80.000	ENSPSIG00000003158	SF3B2	99	74.252	Pelodiscus_sinensis
ENSLBEG00000027739	sf3b2	89	82.595	ENSPMGG00000000819	sf3b2	100	75.568	Periophthalmus_magnuspinnatus
ENSLBEG00000027739	sf3b2	88	79.467	ENSPEMG00000015437	Sf3b2	97	68.764	Peromyscus_maniculatus_bairdii
ENSLBEG00000027739	sf3b2	88	73.482	ENSPEMG00000015451	-	91	68.471	Peromyscus_maniculatus_bairdii
ENSLBEG00000027739	sf3b2	89	79.005	ENSPCIG00000008381	SF3B2	99	68.151	Phascolarctos_cinereus
ENSLBEG00000027739	sf3b2	100	85.155	ENSPFOG00000002552	sf3b2	100	85.155	Poecilia_formosa
ENSLBEG00000027739	sf3b2	100	85.270	ENSPLAG00000001471	sf3b2	100	84.465	Poecilia_latipinna
ENSLBEG00000027739	sf3b2	100	84.793	ENSPMEG00000013180	sf3b2	100	84.908	Poecilia_mexicana
ENSLBEG00000027739	sf3b2	86	87.166	ENSPREG00000002665	sf3b2	100	83.793	Poecilia_reticulata
ENSLBEG00000027739	sf3b2	59	68.156	ENSPPYG00000003034	-	94	62.883	Pongo_abelii
ENSLBEG00000027739	sf3b2	88	79.154	ENSPCAG00000005129	SF3B2	97	68.764	Procavia_capensis
ENSLBEG00000027739	sf3b2	88	78.110	ENSPCOG00000025375	SF3B2	97	68.843	Propithecus_coquereli
ENSLBEG00000027739	sf3b2	55	93.421	ENSPVAG00000005466	-	82	93.421	Pteropus_vampyrus
ENSLBEG00000027739	sf3b2	93	85.955	ENSPNYG00000023594	sf3b2	100	86.396	Pundamilia_nyererei
ENSLBEG00000027739	sf3b2	100	76.940	ENSPNAG00000001891	sf3b2	100	76.600	Pygocentrus_nattereri
ENSLBEG00000027739	sf3b2	88	78.268	ENSRNOG00000020412	Sf3b2	97	67.200	Rattus_norvegicus
ENSLBEG00000027739	sf3b2	88	78.425	ENSRBIG00000034065	SF3B2	97	68.843	Rhinopithecus_bieti
ENSLBEG00000027739	sf3b2	88	78.425	ENSRROG00000034496	SF3B2	97	68.843	Rhinopithecus_roxellana
ENSLBEG00000027739	sf3b2	88	79.463	ENSSBOG00000026337	SF3B2	97	68.665	Saimiri_boliviensis_boliviensis
ENSLBEG00000027739	sf3b2	89	76.526	ENSSHAG00000010933	-	97	65.062	Sarcophilus_harrisii
ENSLBEG00000027739	sf3b2	96	59.316	ENSSHAG00000018043	-	100	58.548	Sarcophilus_harrisii
ENSLBEG00000027739	sf3b2	100	78.073	ENSSFOG00015021125	sf3b2	100	77.519	Scleropages_formosus
ENSLBEG00000027739	sf3b2	100	89.593	ENSSMAG00000004079	sf3b2	97	88.462	Scophthalmus_maximus
ENSLBEG00000027739	sf3b2	74	97.893	ENSSDUG00000008499	sf3b2	100	82.864	Seriola_dumerili
ENSLBEG00000027739	sf3b2	100	89.628	ENSSLDG00000006838	sf3b2	100	89.966	Seriola_lalandi_dorsalis
ENSLBEG00000027739	sf3b2	88	80.284	ENSSPUG00000009198	SF3B2	98	70.242	Sphenodon_punctatus
ENSLBEG00000027739	sf3b2	100	90.301	ENSSPAG00000004406	sf3b2	100	88.517	Stegastes_partitus
ENSLBEG00000027739	sf3b2	88	78.438	ENSSSCG00000012957	SF3B2	97	68.799	Sus_scrofa
ENSLBEG00000027739	sf3b2	98	73.219	ENSTRUG00000007611	sf3b2	97	79.005	Takifugu_rubripes
ENSLBEG00000027739	sf3b2	97	80.453	ENSTNIG00000007441	sf3b2	100	79.395	Tetraodon_nigroviridis
ENSLBEG00000027739	sf3b2	88	69.984	ENSTBEG00000004258	SF3B2	78	85.915	Tupaia_belangeri
ENSLBEG00000027739	sf3b2	88	78.056	ENSTTRG00000014339	SF3B2	97	68.876	Tursiops_truncatus
ENSLBEG00000027739	sf3b2	88	75.663	ENSUAMG00000020754	SF3B2	96	66.216	Ursus_americanus
ENSLBEG00000027739	sf3b2	88	78.281	ENSUMAG00000010994	SF3B2	97	68.687	Ursus_maritimus
ENSLBEG00000027739	sf3b2	59	82.500	ENSVPAG00000008695	SF3B2	65	82.500	Vicugna_pacos
ENSLBEG00000027739	sf3b2	88	79.310	ENSVVUG00000027029	SF3B2	97	69.213	Vulpes_vulpes
ENSLBEG00000027739	sf3b2	75	84.470	ENSXETG00000008422	sf3b2	86	72.478	Xenopus_tropicalis
ENSLBEG00000027739	sf3b2	95	83.234	ENSXCOG00000008943	sf3b2	88	81.886	Xiphophorus_couchianus
ENSLBEG00000027739	sf3b2	100	84.897	ENSXMAG00000008467	sf3b2	100	83.867	Xiphophorus_maculatus