EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027776 (Gene tree)
Gene ID: 109982774
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8998 bases
Position: chrFKLU01000003.1:3742317-3751314
Accession: 109982774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037206	zf-C2H2	PF00096.26	3.5e-28	1	6
ENSLBEP00000037206	zf-C2H2	PF00096.26	3.5e-28	2	6
ENSLBEP00000037206	zf-C2H2	PF00096.26	3.5e-28	3	6
ENSLBEP00000037206	zf-C2H2	PF00096.26	3.5e-28	4	6
ENSLBEP00000037206	zf-C2H2	PF00096.26	3.5e-28	5	6
ENSLBEP00000037206	zf-C2H2	PF00096.26	3.5e-28	6	6
ENSLBEP00000037206	zf-met	PF12874.7	2.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038743	-	4899	XM_020632152	ENSLBEP00000037206	390 (aa)	XP_020487808	UPI0009B38DF2

Gene Model

Click here to download ENSLBEG00000027776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027776	gfi1ab	55	43.750	ENSLBEG00000011145	si:cabz01071911.3	75	43.750
ENSLBEG00000027776	gfi1ab	79	41.420	ENSLBEG00000024737	-	95	41.420
ENSLBEG00000027776	gfi1ab	50	42.069	ENSLBEG00000014282	-	80	42.069
ENSLBEG00000027776	gfi1ab	54	41.875	ENSLBEG00000024509	-	99	41.221
ENSLBEG00000027776	gfi1ab	51	42.581	ENSLBEG00000010165	-	90	42.581
ENSLBEG00000027776	gfi1ab	55	34.337	ENSLBEG00000009419	zbtb41	50	34.337
ENSLBEG00000027776	gfi1ab	59	40.476	ENSLBEG00000028628	znf1174	51	40.476
ENSLBEG00000027776	gfi1ab	64	40.373	ENSLBEG00000002357	-	88	42.236
ENSLBEG00000027776	gfi1ab	96	40.351	ENSLBEG00000020747	-	89	41.250
ENSLBEG00000027776	gfi1ab	50	40.278	ENSLBEG00000008606	-	96	39.881
ENSLBEG00000027776	gfi1ab	55	41.250	ENSLBEG00000011986	-	88	41.250
ENSLBEG00000027776	gfi1ab	52	40.984	ENSLBEG00000011751	znf526	55	40.984
ENSLBEG00000027776	gfi1ab	50	40.000	ENSLBEG00000011210	-	58	40.000
ENSLBEG00000027776	gfi1ab	59	43.210	ENSLBEG00000005307	znf236	58	43.210
ENSLBEG00000027776	gfi1ab	50	46.053	ENSLBEG00000013570	-	97	45.238
ENSLBEG00000027776	gfi1ab	68	41.509	ENSLBEG00000009580	-	82	41.509
ENSLBEG00000027776	gfi1ab	53	38.686	ENSLBEG00000028271	-	77	38.686
ENSLBEG00000027776	gfi1ab	100	61.209	ENSLBEG00000006603	gfi1aa	100	61.713

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027776	gfi1ab	100	63.636	ENSG00000162676	GFI1	100	63.869	Homo_sapiens
ENSLBEG00000027776	gfi1ab	100	88.776	ENSAPOG00000015189	gfi1ab	100	88.776	Acanthochromis_polyacanthus
ENSLBEG00000027776	gfi1ab	100	83.120	ENSACIG00000016354	gfi1ab	100	83.120	Amphilophus_citrinellus
ENSLBEG00000027776	gfi1ab	100	78.005	ENSAOCG00000008339	gfi1ab	100	78.005	Amphiprion_ocellaris
ENSLBEG00000027776	gfi1ab	100	89.031	ENSAPEG00000023870	gfi1ab	100	89.031	Amphiprion_percula
ENSLBEG00000027776	gfi1ab	100	80.256	ENSATEG00000009167	gfi1ab	89	80.256	Anabas_testudineus
ENSLBEG00000027776	gfi1ab	86	66.286	ENSAPLG00000015700	GFI1	99	66.092	Anas_platyrhynchos
ENSLBEG00000027776	gfi1ab	100	63.570	ENSACAG00000004498	GFI1	100	64.059	Anolis_carolinensis
ENSLBEG00000027776	gfi1ab	100	62.615	ENSANAG00000019656	GFI1	100	63.073	Aotus_nancymaae
ENSLBEG00000027776	gfi1ab	100	86.990	ENSACLG00000026458	gfi1ab	93	86.990	Astatotilapia_calliptera
ENSLBEG00000027776	gfi1ab	57	53.571	ENSAMXG00000015228	-	62	59.091	Astyanax_mexicanus
ENSLBEG00000027776	gfi1ab	100	65.915	ENSAMXG00000039600	gfi1ab	100	65.664	Astyanax_mexicanus
ENSLBEG00000027776	gfi1ab	100	52.821	ENSAMXG00000006669	GFI1	100	63.043	Astyanax_mexicanus
ENSLBEG00000027776	gfi1ab	100	61.395	ENSBTAG00000016723	GFI1	100	61.628	Bos_taurus
ENSLBEG00000027776	gfi1ab	100	64.019	ENSCJAG00000017609	GFI1	100	63.573	Callithrix_jacchus
ENSLBEG00000027776	gfi1ab	100	62.676	ENSCAFG00000020155	GFI1	100	62.911	Canis_familiaris
ENSLBEG00000027776	gfi1ab	100	62.676	ENSCAFG00020013371	GFI1	88	62.911	Canis_lupus_dingo
ENSLBEG00000027776	gfi1ab	100	61.772	ENSCHIG00000016135	GFI1	100	62.005	Capra_hircus
ENSLBEG00000027776	gfi1ab	100	61.468	ENSCPOG00000011727	GFI1	100	61.697	Cavia_porcellus
ENSLBEG00000027776	gfi1ab	100	62.385	ENSCCAG00000036072	GFI1	100	62.615	Cebus_capucinus
ENSLBEG00000027776	gfi1ab	100	63.636	ENSCATG00000037873	GFI1	100	63.869	Cercocebus_atys
ENSLBEG00000027776	gfi1ab	100	66.500	ENSCLAG00000005915	GFI1	100	60.860	Chinchilla_lanigera
ENSLBEG00000027776	gfi1ab	98	58.491	ENSCSAG00000001469	GFI1	100	58.760	Chlorocebus_sabaeus
ENSLBEG00000027776	gfi1ab	100	63.869	ENSCANG00000034077	GFI1	100	64.103	Colobus_angolensis_palliatus
ENSLBEG00000027776	gfi1ab	100	62.471	ENSCGRG00001015432	Gfi1	100	63.700	Cricetulus_griseus_chok1gshd
ENSLBEG00000027776	gfi1ab	100	62.000	ENSCSEG00000017729	GFI1	100	62.155	Cynoglossus_semilaevis
ENSLBEG00000027776	gfi1ab	100	80.203	ENSCVAG00000011828	gfi1ab	100	80.203	Cyprinodon_variegatus
ENSLBEG00000027776	gfi1ab	100	58.272	ENSCVAG00000004930	GFI1	100	60.000	Cyprinodon_variegatus
ENSLBEG00000027776	gfi1ab	100	72.111	ENSDARG00000044457	gfi1ab	100	71.859	Danio_rerio
ENSLBEG00000027776	gfi1ab	100	62.791	ENSDNOG00000000782	GFI1	97	62.791	Dasypus_novemcinctus
ENSLBEG00000027776	gfi1ab	100	63.294	ENSEASG00005015509	GFI1	86	63.529	Equus_asinus_asinus
ENSLBEG00000027776	gfi1ab	98	54.167	ENSECAG00000006647	GFI1	94	55.000	Equus_caballus
ENSLBEG00000027776	gfi1ab	100	63.232	ENSEEUG00000000198	GFI1	100	62.763	Erinaceus_europaeus
ENSLBEG00000027776	gfi1ab	100	61.881	ENSELUG00000019033	GFI1	100	62.129	Esox_lucius
ENSLBEG00000027776	gfi1ab	100	74.065	ENSELUG00000003015	gfi1ab	99	73.815	Esox_lucius
ENSLBEG00000027776	gfi1ab	99	60.753	ENSELUG00000006948	-	99	60.753	Esox_lucius
ENSLBEG00000027776	gfi1ab	100	61.521	ENSFCAG00000005914	GFI1	100	62.676	Felis_catus
ENSLBEG00000027776	gfi1ab	100	82.741	ENSFHEG00000010997	gfi1ab	100	82.741	Fundulus_heteroclitus
ENSLBEG00000027776	gfi1ab	100	57.820	ENSFHEG00000000341	GFI1	100	60.096	Fundulus_heteroclitus
ENSLBEG00000027776	gfi1ab	100	73.980	ENSGMOG00000007737	gfi1ab	100	73.980	Gadus_morhua
ENSLBEG00000027776	gfi1ab	100	64.234	ENSGALG00000043650	GFI1	100	64.234	Gallus_gallus
ENSLBEG00000027776	gfi1ab	100	82.828	ENSGAFG00000016637	gfi1ab	100	82.828	Gambusia_affinis
ENSLBEG00000027776	gfi1ab	100	59.367	ENSGAFG00000018063	GFI1	100	60.688	Gambusia_affinis
ENSLBEG00000027776	gfi1ab	100	84.872	ENSGACG00000004257	gfi1ab	97	85.128	Gasterosteus_aculeatus
ENSLBEG00000027776	gfi1ab	100	63.636	ENSGGOG00000005320	GFI1	100	63.869	Gorilla_gorilla
ENSLBEG00000027776	gfi1ab	100	85.422	ENSHBUG00000011969	gfi1ab	100	85.422	Haplochromis_burtoni
ENSLBEG00000027776	gfi1ab	100	62.471	ENSHGLG00000008020	GFI1	100	62.704	Heterocephalus_glaber_female
ENSLBEG00000027776	gfi1ab	100	62.471	ENSHGLG00100000610	GFI1	100	62.704	Heterocephalus_glaber_male
ENSLBEG00000027776	gfi1ab	100	62.169	ENSHCOG00000008590	gfi1ab	100	62.440	Hippocampus_comes
ENSLBEG00000027776	gfi1ab	100	58.354	ENSHCOG00000019555	GFI1	100	68.571	Hippocampus_comes
ENSLBEG00000027776	gfi1ab	100	61.881	ENSIPUG00000013414	GFI1	100	61.084	Ictalurus_punctatus
ENSLBEG00000027776	gfi1ab	100	66.000	ENSIPUG00000010071	gfi1ab	87	65.995	Ictalurus_punctatus
ENSLBEG00000027776	gfi1ab	100	62.500	ENSSTOG00000014583	GFI1	100	62.731	Ictidomys_tridecemlineatus
ENSLBEG00000027776	gfi1ab	100	80.563	ENSKMAG00000003810	gfi1ab	100	80.563	Kryptolebias_marmoratus
ENSLBEG00000027776	gfi1ab	100	67.327	ENSLACG00000013362	GFI1	98	67.079	Latimeria_chalumnae
ENSLBEG00000027776	gfi1ab	100	70.324	ENSLOCG00000004711	gfi1ab	100	70.574	Lepisosteus_oculatus
ENSLBEG00000027776	gfi1ab	100	62.470	ENSLAFG00000018346	GFI1	100	62.708	Loxodonta_africana
ENSLBEG00000027776	gfi1ab	100	63.636	ENSMFAG00000045801	GFI1	100	63.869	Macaca_fascicularis
ENSLBEG00000027776	gfi1ab	100	63.636	ENSMNEG00000036338	GFI1	100	63.869	Macaca_nemestrina
ENSLBEG00000027776	gfi1ab	100	63.636	ENSMLEG00000036181	GFI1	100	63.869	Mandrillus_leucophaeus
ENSLBEG00000027776	gfi1ab	100	87.436	ENSMAMG00000008125	gfi1ab	100	87.436	Mastacembelus_armatus
ENSLBEG00000027776	gfi1ab	100	86.735	ENSMZEG00005009895	gfi1ab	100	86.735	Maylandia_zebra
ENSLBEG00000027776	gfi1ab	86	66.571	ENSMGAG00000008187	GFI1	99	66.859	Meleagris_gallopavo
ENSLBEG00000027776	gfi1ab	100	62.061	ENSMICG00000047208	GFI1	100	62.061	Microcebus_murinus
ENSLBEG00000027776	gfi1ab	100	75.567	ENSMMOG00000005556	gfi1ab	100	75.567	Mola_mola
ENSLBEG00000027776	gfi1ab	100	60.970	ENSMODG00000011802	GFI1	100	61.432	Monodelphis_domestica
ENSLBEG00000027776	gfi1ab	100	82.051	ENSMALG00000014672	gfi1ab	100	82.051	Monopterus_albus
ENSLBEG00000027776	gfi1ab	100	62.441	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.778	Mus_caroli
ENSLBEG00000027776	gfi1ab	100	62.763	ENSMUSG00000029275	Gfi1	100	62.998	Mus_musculus
ENSLBEG00000027776	gfi1ab	100	62.207	MGP_PahariEiJ_G0017280	Gfi1	100	97.778	Mus_pahari
ENSLBEG00000027776	gfi1ab	100	62.676	MGP_SPRETEiJ_G0028507	Gfi1	100	62.998	Mus_spretus
ENSLBEG00000027776	gfi1ab	100	66.327	ENSMPUG00000004178	GFI1	97	65.500	Mustela_putorius_furo
ENSLBEG00000027776	gfi1ab	100	61.593	ENSMLUG00000015191	GFI1	97	61.593	Myotis_lucifugus
ENSLBEG00000027776	gfi1ab	100	84.383	ENSNBRG00000015774	gfi1ab	100	84.383	Neolamprologus_brichardi
ENSLBEG00000027776	gfi1ab	86	64.706	ENSNLEG00000010470	GFI1	91	65.952	Nomascus_leucogenys
ENSLBEG00000027776	gfi1ab	100	61.556	ENSOPRG00000001473	GFI1	100	61.785	Ochotona_princeps
ENSLBEG00000027776	gfi1ab	100	86.990	ENSONIG00000019246	gfi1ab	100	86.990	Oreochromis_niloticus
ENSLBEG00000027776	gfi1ab	98	56.085	ENSOCUG00000023553	GFI1	93	56.300	Oryctolagus_cuniculus
ENSLBEG00000027776	gfi1ab	100	61.654	ENSORLG00000005060	GFI1	100	61.905	Oryzias_latipes
ENSLBEG00000027776	gfi1ab	100	78.571	ENSORLG00000013806	gfi1ab	100	78.571	Oryzias_latipes
ENSLBEG00000027776	gfi1ab	100	79.082	ENSORLG00020001602	gfi1ab	100	79.082	Oryzias_latipes_hni
ENSLBEG00000027776	gfi1ab	100	55.303	ENSORLG00020002817	GFI1	100	55.303	Oryzias_latipes_hni
ENSLBEG00000027776	gfi1ab	100	59.649	ENSORLG00015006070	GFI1	100	60.553	Oryzias_latipes_hsok
ENSLBEG00000027776	gfi1ab	100	60.546	ENSOMEG00000016722	GFI1	100	61.500	Oryzias_melastigma
ENSLBEG00000027776	gfi1ab	100	64.631	ENSOGAG00000027913	GFI1	100	64.631	Otolemur_garnettii
ENSLBEG00000027776	gfi1ab	98	55.689	ENSOARG00000016329	GFI1	94	55.689	Ovis_aries
ENSLBEG00000027776	gfi1ab	100	65.823	ENSPPAG00000042186	GFI1	100	66.076	Pan_paniscus
ENSLBEG00000027776	gfi1ab	100	61.521	ENSPPRG00000007521	GFI1	100	62.676	Panthera_pardus
ENSLBEG00000027776	gfi1ab	100	63.403	ENSPTRG00000043053	GFI1	100	63.636	Pan_troglodytes
ENSLBEG00000027776	gfi1ab	100	63.636	ENSPANG00000016433	GFI1	100	63.869	Papio_anubis
ENSLBEG00000027776	gfi1ab	100	71.571	ENSPKIG00000004263	GFI1	100	71.571	Paramormyrops_kingsleyae
ENSLBEG00000027776	gfi1ab	86	66.763	ENSPSIG00000008734	GFI1	96	67.052	Pelodiscus_sinensis
ENSLBEG00000027776	gfi1ab	100	77.608	ENSPMGG00000012546	gfi1ab	100	77.863	Periophthalmus_magnuspinnatus
ENSLBEG00000027776	gfi1ab	100	63.294	ENSPCIG00000013728	GFI1	100	64.000	Phascolarctos_cinereus
ENSLBEG00000027776	gfi1ab	100	83.333	ENSPFOG00000023214	gfi1ab	100	83.333	Poecilia_formosa
ENSLBEG00000027776	gfi1ab	100	83.333	ENSPLAG00000010879	gfi1ab	100	83.333	Poecilia_latipinna
ENSLBEG00000027776	gfi1ab	100	59.459	ENSPLAG00000005376	GFI1	91	61.425	Poecilia_latipinna
ENSLBEG00000027776	gfi1ab	100	83.586	ENSPMEG00000013694	gfi1ab	100	83.586	Poecilia_mexicana
ENSLBEG00000027776	gfi1ab	100	59.406	ENSPMEG00000019299	GFI1	100	61.634	Poecilia_mexicana
ENSLBEG00000027776	gfi1ab	100	55.897	ENSPREG00000007997	GFI1	100	55.897	Poecilia_reticulata
ENSLBEG00000027776	gfi1ab	100	83.756	ENSPREG00000014097	gfi1ab	100	83.756	Poecilia_reticulata
ENSLBEG00000027776	gfi1ab	100	51.157	ENSPCAG00000011020	GFI1	100	51.157	Procavia_capensis
ENSLBEG00000027776	gfi1ab	100	62.937	ENSPCOG00000020540	GFI1	100	62.295	Propithecus_coquereli
ENSLBEG00000027776	gfi1ab	100	62.238	ENSPVAG00000006928	GFI1	100	62.471	Pteropus_vampyrus
ENSLBEG00000027776	gfi1ab	100	86.990	ENSPNYG00000021183	gfi1ab	100	86.990	Pundamilia_nyererei
ENSLBEG00000027776	gfi1ab	100	65.140	ENSPNAG00000027258	gfi1ab	100	64.885	Pygocentrus_nattereri
ENSLBEG00000027776	gfi1ab	100	58.312	ENSPNAG00000028014	GFI1	100	58.312	Pygocentrus_nattereri
ENSLBEG00000027776	gfi1ab	100	61.827	ENSRNOG00000002042	Gfi1	100	62.061	Rattus_norvegicus
ENSLBEG00000027776	gfi1ab	100	63.636	ENSRBIG00000036467	GFI1	100	63.869	Rhinopithecus_bieti
ENSLBEG00000027776	gfi1ab	100	63.636	ENSRROG00000031687	GFI1	100	63.869	Rhinopithecus_roxellana
ENSLBEG00000027776	gfi1ab	100	63.805	ENSSBOG00000031300	GFI1	100	64.037	Saimiri_boliviensis_boliviensis
ENSLBEG00000027776	gfi1ab	98	57.018	ENSSFOG00015008114	-	85	57.018	Scleropages_formosus
ENSLBEG00000027776	gfi1ab	100	72.886	ENSSFOG00015020295	gfi1	100	73.232	Scleropages_formosus
ENSLBEG00000027776	gfi1ab	100	83.632	ENSSMAG00000002782	gfi1ab	100	83.632	Scophthalmus_maximus
ENSLBEG00000027776	gfi1ab	100	85.385	ENSSDUG00000022410	gfi1ab	100	85.641	Seriola_dumerili
ENSLBEG00000027776	gfi1ab	100	84.615	ENSSLDG00000020163	gfi1ab	100	84.872	Seriola_lalandi_dorsalis
ENSLBEG00000027776	gfi1ab	71	88.929	ENSSPAG00000009140	gfi1ab	90	88.929	Stegastes_partitus
ENSLBEG00000027776	gfi1ab	100	62.125	ENSSSCG00000006902	GFI1	100	62.356	Sus_scrofa
ENSLBEG00000027776	gfi1ab	87	67.330	ENSTGUG00000006060	GFI1	100	66.571	Taeniopygia_guttata
ENSLBEG00000027776	gfi1ab	100	79.389	ENSTRUG00000000415	gfi1ab	100	79.389	Takifugu_rubripes
ENSLBEG00000027776	gfi1ab	100	73.724	ENSTNIG00000000651	gfi1ab	97	74.745	Tetraodon_nigroviridis
ENSLBEG00000027776	gfi1ab	100	61.290	ENSTTRG00000000082	GFI1	100	61.327	Tursiops_truncatus
ENSLBEG00000027776	gfi1ab	100	64.634	ENSUAMG00000021124	GFI1	91	64.878	Ursus_americanus
ENSLBEG00000027776	gfi1ab	100	65.414	ENSXETG00000023006	gfi1	98	65.657	Xenopus_tropicalis
ENSLBEG00000027776	gfi1ab	86	51.130	ENSXMAG00000009274	GFI1	70	54.416	Xiphophorus_maculatus
ENSLBEG00000027776	gfi1ab	100	83.503	ENSXMAG00000010523	gfi1ab	100	83.503	Xiphophorus_maculatus