EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027811 (Gene tree)
Gene ID: 109988064
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3595 bases
Position: chrFKLU01000131.1:777155-780749
Accession: 109988064
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037263	zf-RNPHF	PF08080.12	1.7e-08	1	1
ENSLBEP00000037263	RRM_1	PF00076.22	1.2e-31	1	3
ENSLBEP00000037263	RRM_1	PF00076.22	1.2e-31	2	3
ENSLBEP00000037263	RRM_1	PF00076.22	1.2e-31	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038802	-	1224	XM_020639400	ENSLBEP00000037263	407 (aa)	XP_020495056	UPI0009B45CF4

Gene Model

Click here to download ENSLBEG00000027811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027811's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027811	hnrnph1	79	62.595	ENSLBEG00000001661	hnrnph3	78	62.595
ENSLBEG00000027811	hnrnph1	80	40.193	ENSLBEG00000018100	grsf1	93	40.193
ENSLBEG00000027811	hnrnph1	86	59.626	ENSLBEG00000008709	hnrnph3	95	58.987

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027811	hnrnph1	100	97.543	ENSAPOG00000016614	hnrnph1	100	97.543	Acanthochromis_polyacanthus
ENSLBEG00000027811	hnrnph1	92	97.340	ENSACIG00000008964	hnrnph1	98	97.340	Amphilophus_citrinellus
ENSLBEG00000027811	hnrnph1	100	98.034	ENSAOCG00000008372	hnrnph1	100	98.034	Amphiprion_ocellaris
ENSLBEG00000027811	hnrnph1	100	97.789	ENSAPEG00000012980	hnrnph1	100	97.789	Amphiprion_percula
ENSLBEG00000027811	hnrnph1	100	98.280	ENSATEG00000002792	hnrnph1	100	98.280	Anabas_testudineus
ENSLBEG00000027811	hnrnph1	99	70.354	ENSACAG00000016323	-	91	74.580	Anolis_carolinensis
ENSLBEG00000027811	hnrnph1	84	92.978	ENSACLG00000003313	hnrnph1	97	92.978	Astatotilapia_calliptera
ENSLBEG00000027811	hnrnph1	99	82.843	ENSAMXG00000030703	hnrnph1l	84	83.088	Astyanax_mexicanus
ENSLBEG00000027811	hnrnph1	100	83.495	ENSAMXG00000002483	hnrnph1	99	88.127	Astyanax_mexicanus
ENSLBEG00000027811	hnrnph1	100	95.599	ENSCSEG00000015891	hnrnph1	100	95.599	Cynoglossus_semilaevis
ENSLBEG00000027811	hnrnph1	100	95.332	ENSCVAG00000014097	hnrnph1	100	94.349	Cyprinodon_variegatus
ENSLBEG00000027811	hnrnph1	93	88.158	ENSDARG00000040881	hnrnph1	94	88.684	Danio_rerio
ENSLBEG00000027811	hnrnph1	95	87.918	ENSDARG00000005551	hnrnph1l	99	85.049	Danio_rerio
ENSLBEG00000027811	hnrnph1	100	86.052	ENSELUG00000006715	hnrnph1	94	87.436	Esox_lucius
ENSLBEG00000027811	hnrnph1	96	85.263	ENSELUG00000021437	-	99	87.895	Esox_lucius
ENSLBEG00000027811	hnrnph1	100	94.103	ENSFHEG00000008474	hnrnph1	100	92.629	Fundulus_heteroclitus
ENSLBEG00000027811	hnrnph1	96	88.295	ENSGMOG00000006782	hnrnph1	97	88.295	Gadus_morhua
ENSLBEG00000027811	hnrnph1	100	96.314	ENSGAFG00000006280	hnrnph1	100	96.314	Gambusia_affinis
ENSLBEG00000027811	hnrnph1	100	92.875	ENSGACG00000018352	hnrnph1	99	90.291	Gasterosteus_aculeatus
ENSLBEG00000027811	hnrnph1	84	92.978	ENSHBUG00000010547	hnrnph1	98	92.978	Haplochromis_burtoni
ENSLBEG00000027811	hnrnph1	100	84.798	ENSHCOG00000004513	hnrnph1	100	88.124	Hippocampus_comes
ENSLBEG00000027811	hnrnph1	100	82.524	ENSIPUG00000018262	hnrnph1	100	84.709	Ictalurus_punctatus
ENSLBEG00000027811	hnrnph1	95	83.548	ENSIPUG00000024047	hnrnph1l	90	85.224	Ictalurus_punctatus
ENSLBEG00000027811	hnrnph1	100	94.634	ENSKMAG00000018802	hnrnph1	100	93.415	Kryptolebias_marmoratus
ENSLBEG00000027811	hnrnph1	99	82.134	ENSLOCG00000012510	hnrnph1	91	81.390	Lepisosteus_oculatus
ENSLBEG00000027811	hnrnph1	99	53.613	ENSMMUG00000017392	-	83	55.882	Macaca_mulatta
ENSLBEG00000027811	hnrnph1	99	53.349	ENSMNEG00000030544	-	83	55.882	Macaca_nemestrina
ENSLBEG00000027811	hnrnph1	86	90.860	ENSMAMG00000011478	hnrnph1	99	90.860	Mastacembelus_armatus
ENSLBEG00000027811	hnrnph1	100	97.052	ENSMZEG00005009791	hnrnph1	100	97.052	Maylandia_zebra
ENSLBEG00000027811	hnrnph1	92	95.263	ENSMMOG00000009064	hnrnph1	98	95.000	Mola_mola
ENSLBEG00000027811	hnrnph1	74	52.853	ENSMODG00000002200	-	99	51.952	Monodelphis_domestica
ENSLBEG00000027811	hnrnph1	85	93.611	ENSMALG00000003999	hnrnph1	99	93.611	Monopterus_albus
ENSLBEG00000027811	hnrnph1	84	92.978	ENSNBRG00000015406	hnrnph1	98	92.978	Neolamprologus_brichardi
ENSLBEG00000027811	hnrnph1	100	97.297	ENSONIG00000017754	hnrnph1	100	97.297	Oreochromis_niloticus
ENSLBEG00000027811	hnrnph1	100	94.915	ENSORLG00000006932	hnrnph1	100	94.915	Oryzias_latipes
ENSLBEG00000027811	hnrnph1	100	94.915	ENSORLG00020007881	hnrnph1	100	94.915	Oryzias_latipes_hni
ENSLBEG00000027811	hnrnph1	100	94.915	ENSORLG00015005306	hnrnph1	100	94.915	Oryzias_latipes_hsok
ENSLBEG00000027811	hnrnph1	100	96.569	ENSOMEG00000009827	hnrnph1	100	96.569	Oryzias_melastigma
ENSLBEG00000027811	hnrnph1	93	82.338	ENSPKIG00000009532	-	93	81.095	Paramormyrops_kingsleyae
ENSLBEG00000027811	hnrnph1	100	88.350	ENSPKIG00000018203	hnrnph1l	100	86.341	Paramormyrops_kingsleyae
ENSLBEG00000027811	hnrnph1	100	93.366	ENSPMGG00000012151	hnrnph1	100	93.366	Periophthalmus_magnuspinnatus
ENSLBEG00000027811	hnrnph1	100	96.314	ENSPFOG00000004097	hnrnph1	100	96.314	Poecilia_formosa
ENSLBEG00000027811	hnrnph1	100	96.314	ENSPLAG00000011771	hnrnph1	100	96.314	Poecilia_latipinna
ENSLBEG00000027811	hnrnph1	100	96.560	ENSPMEG00000019446	hnrnph1	100	96.560	Poecilia_mexicana
ENSLBEG00000027811	hnrnph1	100	96.560	ENSPREG00000005780	hnrnph1	100	96.560	Poecilia_reticulata
ENSLBEG00000027811	hnrnph1	100	97.052	ENSPNYG00000000204	hnrnph1	100	97.052	Pundamilia_nyererei
ENSLBEG00000027811	hnrnph1	99	84.108	ENSPNAG00000002784	hnrnph1l	99	83.333	Pygocentrus_nattereri
ENSLBEG00000027811	hnrnph1	100	83.495	ENSPNAG00000000439	hnrnph1	100	85.680	Pygocentrus_nattereri
ENSLBEG00000027811	hnrnph1	98	89.277	ENSSFOG00015022796	hnrnph1l	99	88.189	Scleropages_formosus
ENSLBEG00000027811	hnrnph1	97	87.688	ENSSFOG00015016055	-	94	89.239	Scleropages_formosus
ENSLBEG00000027811	hnrnph1	96	91.940	ENSSMAG00000007820	hnrnph1	96	95.013	Scophthalmus_maximus
ENSLBEG00000027811	hnrnph1	100	98.034	ENSSDUG00000008785	hnrnph1	100	98.034	Seriola_dumerili
ENSLBEG00000027811	hnrnph1	100	98.034	ENSSLDG00000010685	hnrnph1	100	98.034	Seriola_lalandi_dorsalis
ENSLBEG00000027811	hnrnph1	100	97.789	ENSSPAG00000009921	hnrnph1	100	97.789	Stegastes_partitus
ENSLBEG00000027811	hnrnph1	100	95.332	ENSTRUG00000020069	hnrnph1	100	95.332	Takifugu_rubripes
ENSLBEG00000027811	hnrnph1	99	72.374	ENSXETG00000018321	hnrnph1	85	77.898	Xenopus_tropicalis
ENSLBEG00000027811	hnrnph1	92	92.839	ENSXCOG00000009133	hnrnph1	97	92.839	Xiphophorus_couchianus
ENSLBEG00000027811	hnrnph1	92	96.543	ENSXMAG00000021332	hnrnph1	99	96.543	Xiphophorus_maculatus