EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027819 (Gene tree)
Gene ID: 109985225
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: ras-related protein Rab-34-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 9136 bases
Position: chrFKLU01000080.1:930293-939428
Accession: 109985225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037291	MMR_HSR1	PF01926.23	4.9e-05	1	1
ENSLBEP00000037300	MMR_HSR1	PF01926.23	8.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038832	-	606	-	ENSLBEP00000037291	201 (aa)	-	-
ENSLBET00000038842	-	750	XM_020635484	ENSLBEP00000037300	249 (aa)	XP_020491140	-
ENSLBET00000038848	-	510	-	ENSLBEP00000037306	169 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000027819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027819	rab34b	73	38.356	ENSLBEG00000001146	rab30	70	38.356
ENSLBEG00000027819	rab34b	73	36.735	ENSLBEG00000002926	si:dkey-34d22.5	67	36.735
ENSLBEG00000027819	rab34b	58	37.931	ENSLBEG00000005861	rab18a	54	37.931
ENSLBEG00000027819	rab34b	60	44.167	ENSLBEG00000027226	-	52	44.167
ENSLBEG00000027819	rab34b	60	36.290	ENSLBEG00000001796	RAB7A	60	36.290
ENSLBEG00000027819	rab34b	72	39.041	ENSLBEG00000027539	-	66	39.041
ENSLBEG00000027819	rab34b	58	30.769	ENSLBEG00000014885	rheb	63	30.769
ENSLBEG00000027819	rab34b	76	35.714	ENSLBEG00000001193	rab42a	70	35.714
ENSLBEG00000027819	rab34b	73	37.671	ENSLBEG00000007681	si:dkey-16l2.16	95	32.020
ENSLBEG00000027819	rab34b	59	44.538	ENSLBEG00000028426	RAB1A	58	44.538
ENSLBEG00000027819	rab34b	75	34.641	ENSLBEG00000018180	si:dkey-13a21.4	88	33.149
ENSLBEG00000027819	rab34b	73	39.041	ENSLBEG00000003748	rab6a	76	39.130
ENSLBEG00000027819	rab34b	73	37.671	ENSLBEG00000013463	rab15	77	35.928
ENSLBEG00000027819	rab34b	59	33.607	ENSLBEG00000005128	-	55	33.607
ENSLBEG00000027819	rab34b	64	40.310	ENSLBEG00000019372	rab6bb	76	37.267
ENSLBEG00000027819	rab34b	58	39.316	ENSLBEG00000005981	-	60	41.667
ENSLBEG00000027819	rab34b	59	44.538	ENSLBEG00000021040	rab1ba	59	44.538
ENSLBEG00000027819	rab34b	59	36.066	ENSLBEG00000011478	rab9b	56	36.066
ENSLBEG00000027819	rab34b	69	39.130	ENSLBEG00000019435	rab14	76	35.928
ENSLBEG00000027819	rab34b	71	39.161	ENSLBEG00000014427	rab33a	70	37.107
ENSLBEG00000027819	rab34b	73	31.507	ENSLBEG00000003235	rab22a	81	30.000
ENSLBEG00000027819	rab34b	59	44.538	ENSLBEG00000005791	-	56	44.538
ENSLBEG00000027819	rab34b	73	34.247	ENSLBEG00000003101	rab4a	67	34.247
ENSLBEG00000027819	rab34b	58	40.171	ENSLBEG00000026857	rab11a	54	40.171
ENSLBEG00000027819	rab34b	80	32.039	ENSLBEG00000016446	rab25b	93	32.039
ENSLBEG00000027819	rab34b	67	41.176	ENSLBEG00000026930	rab6ba	83	38.286
ENSLBEG00000027819	rab34b	80	34.826	ENSLBEG00000001618	rab35b	96	34.826
ENSLBEG00000027819	rab34b	58	41.026	ENSLBEG00000016417	rab11al	55	41.026
ENSLBEG00000027819	rab34b	65	39.231	ENSLBEG00000020796	rab2a	76	36.810
ENSLBEG00000027819	rab34b	59	38.655	ENSLBEG00000002516	rab5aa	52	38.655
ENSLBEG00000027819	rab34b	67	37.313	ENSLBEG00000013176	rab23	69	40.000
ENSLBEG00000027819	rab34b	63	33.125	ENSLBEG00000010408	-	71	33.125
ENSLBEG00000027819	rab34b	69	38.406	ENSLBEG00000026790	-	63	38.406
ENSLBEG00000027819	rab34b	62	32.031	ENSLBEG00000020582	rab9a	63	32.031
ENSLBEG00000027819	rab34b	64	37.500	ENSLBEG00000013756	rab12	65	34.177
ENSLBEG00000027819	rab34b	62	39.200	ENSLBEG00000002367	rab25a	58	39.200
ENSLBEG00000027819	rab34b	71	33.333	ENSLBEG00000027691	RAB17	63	33.333
ENSLBEG00000027819	rab34b	60	36.290	ENSLBEG00000017798	-	60	36.290
ENSLBEG00000027819	rab34b	78	38.608	ENSLBEG00000001313	RAB39B	73	38.608
ENSLBEG00000027819	rab34b	59	44.538	ENSLBEG00000027781	rab1ab	58	44.538
ENSLBEG00000027819	rab34b	58	39.316	ENSLBEG00000015248	rab11bb	53	39.316
ENSLBEG00000027819	rab34b	58	39.316	ENSLBEG00000004172	-	53	39.316
ENSLBEG00000027819	rab34b	73	30.380	ENSLBEG00000027628	si:cabz01085950.1	72	30.380
ENSLBEG00000027819	rab34b	60	39.370	ENSLBEG00000005018	rab32b	59	39.370
ENSLBEG00000027819	rab34b	58	37.069	ENSLBEG00000019428	rab18b	57	37.069
ENSLBEG00000027819	rab34b	62	44.800	ENSLBEG00000025798	zgc:101559	53	44.800
ENSLBEG00000027819	rab34b	77	39.490	ENSLBEG00000022630	-	73	39.490
ENSLBEG00000027819	rab34b	64	41.985	ENSLBEG00000018063	-	54	41.985
ENSLBEG00000027819	rab34b	63	42.520	ENSLBEG00000026777	rab33ba	55	42.520
ENSLBEG00000027819	rab34b	65	41.985	ENSLBEG00000026779	rab13	79	39.241
ENSLBEG00000027819	rab34b	80	31.250	ENSLBEG00000026989	RAB15	97	31.250
ENSLBEG00000027819	rab34b	58	39.316	ENSLBEG00000006087	rab11ba	53	39.316
ENSLBEG00000027819	rab34b	65	35.385	ENSLBEG00000004128	rab5c	59	35.385
ENSLBEG00000027819	rab34b	100	69.531	ENSLBEG00000026006	rab34a	96	69.531
ENSLBEG00000027819	rab34b	73	37.671	ENSLBEG00000008746	RAB41	75	37.888

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027819	rab34b	88	93.220	ENSAPOG00000019147	rab34b	99	77.619	Acanthochromis_polyacanthus
ENSLBEG00000027819	rab34b	100	76.587	ENSACIG00000004859	rab34b	99	76.587	Amphilophus_citrinellus
ENSLBEG00000027819	rab34b	92	92.973	ENSAOCG00000007106	rab34b	93	85.547	Amphiprion_ocellaris
ENSLBEG00000027819	rab34b	91	92.896	ENSAPEG00000018607	rab34b	85	86.555	Amphiprion_percula
ENSLBEG00000027819	rab34b	90	92.265	ENSATEG00000006851	rab34b	94	84.874	Anabas_testudineus
ENSLBEG00000027819	rab34b	100	86.275	ENSACLG00000005733	rab34b	96	86.275	Astatotilapia_calliptera
ENSLBEG00000027819	rab34b	90	78.889	ENSAMXG00000006018	rab34b	98	69.841	Astyanax_mexicanus
ENSLBEG00000027819	rab34b	92	84.324	ENSCSEG00000018133	rab34b	95	80.753	Cynoglossus_semilaevis
ENSLBEG00000027819	rab34b	99	74.409	ENSDARG00000010977	rab34b	98	74.409	Danio_rerio
ENSLBEG00000027819	rab34b	100	82.353	ENSELUG00000005597	rab34b	99	82.353	Esox_lucius
ENSLBEG00000027819	rab34b	94	90.426	ENSFHEG00000004532	rab34b	100	83.858	Fundulus_heteroclitus
ENSLBEG00000027819	rab34b	75	90.000	ENSGMOG00000007140	rab34b	100	80.583	Gadus_morhua
ENSLBEG00000027819	rab34b	100	87.451	ENSGACG00000020514	rab34b	99	87.451	Gasterosteus_aculeatus
ENSLBEG00000027819	rab34b	99	68.379	ENSIPUG00000024531	rab34	98	68.379	Ictalurus_punctatus
ENSLBEG00000027819	rab34b	100	83.137	ENSKMAG00000019341	rab34b	100	83.137	Kryptolebias_marmoratus
ENSLBEG00000027819	rab34b	100	87.302	ENSMAMG00000020214	rab34b	100	87.302	Mastacembelus_armatus
ENSLBEG00000027819	rab34b	100	85.714	ENSMMOG00000010936	rab34b	86	85.714	Mola_mola
ENSLBEG00000027819	rab34b	94	87.234	ENSMALG00000018499	rab34b	89	86.975	Monopterus_albus
ENSLBEG00000027819	rab34b	100	86.667	ENSONIG00000005519	rab34b	100	86.667	Oreochromis_niloticus
ENSLBEG00000027819	rab34b	100	82.937	ENSORLG00000003119	rab34b	92	82.937	Oryzias_latipes
ENSLBEG00000027819	rab34b	100	83.333	ENSORLG00020016139	rab34b	92	83.333	Oryzias_latipes_hni
ENSLBEG00000027819	rab34b	100	83.730	ENSORLG00015000584	rab34b	92	83.730	Oryzias_latipes_hsok
ENSLBEG00000027819	rab34b	100	84.524	ENSOMEG00000010334	rab34b	98	83.402	Oryzias_melastigma
ENSLBEG00000027819	rab34b	99	70.079	ENSPKIG00000013326	rab34b	98	70.079	Paramormyrops_kingsleyae
ENSLBEG00000027819	rab34b	100	83.465	ENSPMGG00000021697	rab34b	99	83.465	Periophthalmus_magnuspinnatus
ENSLBEG00000027819	rab34b	100	85.098	ENSPFOG00000011444	rab34b	99	85.098	Poecilia_formosa
ENSLBEG00000027819	rab34b	100	85.098	ENSPLAG00000005074	rab34b	100	85.098	Poecilia_latipinna
ENSLBEG00000027819	rab34b	100	85.098	ENSPMEG00000013297	rab34b	100	85.098	Poecilia_mexicana
ENSLBEG00000027819	rab34b	100	84.706	ENSPREG00000009813	rab34b	100	84.706	Poecilia_reticulata
ENSLBEG00000027819	rab34b	87	93.103	ENSPNYG00000017153	rab34b	97	93.103	Pundamilia_nyererei
ENSLBEG00000027819	rab34b	89	78.771	ENSPNAG00000015040	rab34b	99	71.730	Pygocentrus_nattereri
ENSLBEG00000027819	rab34b	100	70.703	ENSSFOG00015005188	rab34	99	70.703	Scleropages_formosus
ENSLBEG00000027819	rab34b	98	87.045	ENSSMAG00000019926	rab34b	100	87.607	Scophthalmus_maximus
ENSLBEG00000027819	rab34b	100	90.196	ENSSDUG00000016760	rab34b	80	90.196	Seriola_dumerili
ENSLBEG00000027819	rab34b	94	94.180	ENSSLDG00000014812	rab34b	92	94.180	Seriola_lalandi_dorsalis
ENSLBEG00000027819	rab34b	100	86.220	ENSSPAG00000002801	rab34b	100	86.220	Stegastes_partitus
ENSLBEG00000027819	rab34b	90	88.950	ENSTRUG00000014481	rab34b	98	82.645	Takifugu_rubripes
ENSLBEG00000027819	rab34b	100	81.961	ENSTNIG00000016158	rab34b	99	81.961	Tetraodon_nigroviridis