EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000027847 (Gene tree)
Gene ID: 109998490
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC109998490
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 2663 bases
Position: chrFKLU01000490.1:119018-121680
Accession: 109998490
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037305	PABP	PF00658.18	1.4e-46	1	3
ENSLBEP00000037305	PABP	PF00658.18	1.4e-46	2	3
ENSLBEP00000037305	PABP	PF00658.18	1.4e-46	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038847	-	675	XM_020653361	ENSLBEP00000037305	224 (aa)	XP_020509017	UPI0009B39C5B

Gene Model

Click here to download ENSLBEG00000027847's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027847's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027847	-	96	83.645	ENSAPOG00000023881	-	100	83.645	Acanthochromis_polyacanthus
ENSLBEG00000027847	-	96	82.710	ENSAOCG00000019884	-	100	82.710	Amphiprion_ocellaris
ENSLBEG00000027847	-	96	82.710	ENSAPEG00000020987	-	100	82.710	Amphiprion_percula
ENSLBEG00000027847	-	96	84.112	ENSATEG00000013831	-	99	84.112	Anabas_testudineus
ENSLBEG00000027847	-	96	80.374	ENSACLG00000027916	-	100	80.374	Astatotilapia_calliptera
ENSLBEG00000027847	-	94	60.563	ENSAMXG00000041484	-	93	60.563	Astyanax_mexicanus
ENSLBEG00000027847	-	95	75.691	ENSCSEG00000001317	-	97	75.691	Cynoglossus_semilaevis
ENSLBEG00000027847	-	96	76.636	ENSCVAG00000000578	-	99	76.636	Cyprinodon_variegatus
ENSLBEG00000027847	-	95	69.626	ENSELUG00000001731	-	82	69.626	Esox_lucius
ENSLBEG00000027847	-	98	76.887	ENSFHEG00000007741	-	98	76.887	Fundulus_heteroclitus
ENSLBEG00000027847	-	94	72.131	ENSGAFG00000012983	-	67	72.131	Gambusia_affinis
ENSLBEG00000027847	-	96	77.934	ENSHBUG00000000185	-	60	77.934	Haplochromis_burtoni
ENSLBEG00000027847	-	96	69.907	ENSHCOG00000003117	-	100	69.907	Hippocampus_comes
ENSLBEG00000027847	-	95	82.547	ENSKMAG00000011397	-	99	82.547	Kryptolebias_marmoratus
ENSLBEG00000027847	-	91	61.364	ENSLOCG00000003085	-	98	57.692	Lepisosteus_oculatus
ENSLBEG00000027847	-	96	86.916	ENSMAMG00000017628	-	100	86.916	Mastacembelus_armatus
ENSLBEG00000027847	-	92	78.022	ENSMMOG00000004490	-	91	78.022	Mola_mola
ENSLBEG00000027847	-	95	83.962	ENSMALG00000004586	-	99	83.962	Monopterus_albus
ENSLBEG00000027847	-	92	79.330	ENSNBRG00000006752	-	74	79.330	Neolamprologus_brichardi
ENSLBEG00000027847	-	89	61.000	ENSPKIG00000005307	-	93	61.321	Paramormyrops_kingsleyae
ENSLBEG00000027847	-	96	65.746	ENSPMGG00000004590	-	98	65.746	Periophthalmus_magnuspinnatus
ENSLBEG00000027847	-	96	77.674	ENSPFOG00000023453	-	100	77.674	Poecilia_formosa
ENSLBEG00000027847	-	96	78.972	ENSPLAG00000003198	-	99	78.972	Poecilia_latipinna
ENSLBEG00000027847	-	91	74.302	ENSPMEG00000022008	-	68	74.302	Poecilia_mexicana
ENSLBEG00000027847	-	97	71.429	ENSPREG00000001981	-	99	71.429	Poecilia_reticulata
ENSLBEG00000027847	-	92	78.107	ENSPNYG00000004740	-	87	78.107	Pundamilia_nyererei
ENSLBEG00000027847	-	82	46.392	ENSPNAG00000018692	-	73	46.392	Pygocentrus_nattereri
ENSLBEG00000027847	-	96	65.094	ENSSFOG00015001322	-	95	65.094	Scleropages_formosus
ENSLBEG00000027847	-	95	81.604	ENSSMAG00000008778	-	99	81.604	Scophthalmus_maximus
ENSLBEG00000027847	-	96	86.916	ENSSDUG00000015116	-	100	86.916	Seriola_dumerili
ENSLBEG00000027847	-	96	87.850	ENSSLDG00000000425	-	100	87.850	Seriola_lalandi_dorsalis
ENSLBEG00000027847	-	96	85.047	ENSSPAG00000015141	-	100	85.047	Stegastes_partitus
ENSLBEG00000027847	-	95	78.140	ENSTRUG00000021899	-	99	78.140	Takifugu_rubripes
ENSLBEG00000027847	-	96	72.897	ENSTNIG00000002576	-	99	72.897	Tetraodon_nigroviridis
ENSLBEG00000027847	-	97	62.212	ENSXCOG00000001548	-	99	62.212	Xiphophorus_couchianus
ENSLBEG00000027847	-	96	78.505	ENSXMAG00000021863	-	99	78.505	Xiphophorus_maculatus