EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027855 (Gene tree)
Gene ID: 109980724
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: vigilin-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 16533 bases
Position: chrFKLU01000024.1:598052-614584
Accession: 109980724
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	1	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	2	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	3	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	4	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	5	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	6	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	7	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	8	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	9	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	10	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	11	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	12	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	13	14
ENSLBEP00000037366	KH_1	PF00013.29	2.9e-186	14	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	1	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	2	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	3	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	4	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	5	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	6	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	7	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	8	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	9	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	10	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	11	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	12	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	13	14
ENSLBEP00000037345	KH_1	PF00013.29	7.5e-186	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038914	-	3810	-	ENSLBEP00000037366	1269 (aa)	-	-
ENSLBET00000038890	-	4010	XM_020629217	ENSLBEP00000037345	1268 (aa)	XP_020484873	UPI0009B3A6D4

Gene Model

Click here to download ENSLBEG00000027855's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027855's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027855	hdlbpb	100	70.474	ENSLBEG00000027461	hdlbpa	100	70.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027855	hdlbpb	100	97.082	ENSAPOG00000006904	hdlbpb	100	97.082	Acanthochromis_polyacanthus
ENSLBEG00000027855	hdlbpb	100	91.451	ENSACIG00000016154	hdlbpb	100	91.523	Amphilophus_citrinellus
ENSLBEG00000027855	hdlbpb	100	97.792	ENSAOCG00000004083	hdlbpb	100	97.792	Amphiprion_ocellaris
ENSLBEG00000027855	hdlbpb	100	97.713	ENSAPEG00000012270	hdlbpb	100	97.713	Amphiprion_percula
ENSLBEG00000027855	hdlbpb	100	96.530	ENSATEG00000019877	hdlbpb	100	96.530	Anabas_testudineus
ENSLBEG00000027855	hdlbpb	100	82.019	ENSACAG00000003606	-	100	82.019	Anolis_carolinensis
ENSLBEG00000027855	hdlbpb	100	96.451	ENSACLG00000006618	hdlbpb	100	96.451	Astatotilapia_calliptera
ENSLBEG00000027855	hdlbpb	100	77.717	ENSAMXG00000019946	hdlbpb	100	77.717	Astyanax_mexicanus
ENSLBEG00000027855	hdlbpb	100	94.953	ENSCSEG00000000955	hdlbpb	100	94.953	Cynoglossus_semilaevis
ENSLBEG00000027855	hdlbpb	100	95.347	ENSCVAG00000005345	hdlbpb	100	95.347	Cyprinodon_variegatus
ENSLBEG00000027855	hdlbpb	99	85.478	ENSDARG00000061864	hdlbpb	99	85.478	Danio_rerio
ENSLBEG00000027855	hdlbpb	92	70.085	ENSEBUG00000005304	hdlbpb	96	69.915	Eptatretus_burgeri
ENSLBEG00000027855	hdlbpb	100	78.100	ENSELUG00000019925	hdlbpb	100	78.257	Esox_lucius
ENSLBEG00000027855	hdlbpb	87	34.459	ENSFHEG00000001701	hdlbpb	100	89.984	Fundulus_heteroclitus
ENSLBEG00000027855	hdlbpb	95	88.152	ENSGMOG00000004522	hdlbpb	78	88.152	Gadus_morhua
ENSLBEG00000027855	hdlbpb	100	94.874	ENSGAFG00000005278	hdlbpb	100	94.874	Gambusia_affinis
ENSLBEG00000027855	hdlbpb	99	92.739	ENSGACG00000019361	hdlbpb	100	92.976	Gasterosteus_aculeatus
ENSLBEG00000027855	hdlbpb	100	96.293	ENSHBUG00000018434	hdlbpb	100	96.293	Haplochromis_burtoni
ENSLBEG00000027855	hdlbpb	100	84.791	ENSIPUG00000003291	HDLBP	100	85.079	Ictalurus_punctatus
ENSLBEG00000027855	hdlbpb	100	95.584	ENSKMAG00000016562	hdlbpb	100	95.584	Kryptolebias_marmoratus
ENSLBEG00000027855	hdlbpb	100	84.386	ENSLACG00000007661	hdlbpb	90	84.386	Latimeria_chalumnae
ENSLBEG00000027855	hdlbpb	100	82.821	ENSLOCG00000013909	hdlbpb	100	82.821	Lepisosteus_oculatus
ENSLBEG00000027855	hdlbpb	100	96.924	ENSMAMG00000003035	hdlbpb	100	96.924	Mastacembelus_armatus
ENSLBEG00000027855	hdlbpb	100	96.451	ENSMZEG00005021465	hdlbpb	100	96.451	Maylandia_zebra
ENSLBEG00000027855	hdlbpb	100	95.347	ENSMMOG00000012525	hdlbpb	100	95.662	Mola_mola
ENSLBEG00000027855	hdlbpb	100	94.953	ENSMALG00000008938	hdlbpb	100	94.953	Monopterus_albus
ENSLBEG00000027855	hdlbpb	100	96.530	ENSNBRG00000002236	hdlbpb	100	96.530	Neolamprologus_brichardi
ENSLBEG00000027855	hdlbpb	100	96.215	ENSONIG00000009211	hdlbpb	100	96.215	Oreochromis_niloticus
ENSLBEG00000027855	hdlbpb	100	94.401	ENSORLG00000006581	hdlbpb	100	94.401	Oryzias_latipes
ENSLBEG00000027855	hdlbpb	100	94.479	ENSORLG00020010012	hdlbpb	100	94.479	Oryzias_latipes_hni
ENSLBEG00000027855	hdlbpb	100	94.716	ENSORLG00015006863	hdlbpb	100	94.716	Oryzias_latipes_hsok
ENSLBEG00000027855	hdlbpb	100	94.953	ENSOMEG00000011131	hdlbpb	100	94.953	Oryzias_melastigma
ENSLBEG00000027855	hdlbpb	100	88.407	ENSPKIG00000005966	hdlbpb	100	88.486	Paramormyrops_kingsleyae
ENSLBEG00000027855	hdlbpb	86	91.944	ENSPMGG00000019853	hdlbpb	99	91.944	Periophthalmus_magnuspinnatus
ENSLBEG00000027855	hdlbpb	92	65.232	ENSPMAG00000000249	-	99	65.064	Petromyzon_marinus
ENSLBEG00000027855	hdlbpb	94	74.671	ENSPMAG00000002131	hdlbpb	100	74.671	Petromyzon_marinus
ENSLBEG00000027855	hdlbpb	100	94.306	ENSPFOG00000008755	hdlbpb	100	94.306	Poecilia_formosa
ENSLBEG00000027855	hdlbpb	100	95.347	ENSPLAG00000007055	hdlbpb	100	95.347	Poecilia_latipinna
ENSLBEG00000027855	hdlbpb	100	95.268	ENSPMEG00000001952	hdlbpb	100	95.268	Poecilia_mexicana
ENSLBEG00000027855	hdlbpb	100	95.189	ENSPREG00000012848	hdlbpb	100	95.189	Poecilia_reticulata
ENSLBEG00000027855	hdlbpb	100	96.215	ENSPNYG00000022467	hdlbpb	100	96.215	Pundamilia_nyererei
ENSLBEG00000027855	hdlbpb	100	87.461	ENSPNAG00000011104	hdlbpb	100	87.461	Pygocentrus_nattereri
ENSLBEG00000027855	hdlbpb	100	87.461	ENSSFOG00015023199	hdlbpb	100	87.461	Scleropages_formosus
ENSLBEG00000027855	hdlbpb	100	96.530	ENSSMAG00000008790	hdlbpb	100	96.530	Scophthalmus_maximus
ENSLBEG00000027855	hdlbpb	100	97.476	ENSSDUG00000020694	hdlbpb	100	97.476	Seriola_dumerili
ENSLBEG00000027855	hdlbpb	100	96.924	ENSSLDG00000020807	hdlbpb	100	96.924	Seriola_lalandi_dorsalis
ENSLBEG00000027855	hdlbpb	100	83.044	ENSSPUG00000018688	-	100	83.044	Sphenodon_punctatus
ENSLBEG00000027855	hdlbpb	100	97.634	ENSSPAG00000016969	hdlbpb	100	97.634	Stegastes_partitus
ENSLBEG00000027855	hdlbpb	98	92.716	ENSTRUG00000012888	hdlbpb	99	92.716	Takifugu_rubripes
ENSLBEG00000027855	hdlbpb	99	94.205	ENSTNIG00000002555	hdlbpb	100	94.205	Tetraodon_nigroviridis
ENSLBEG00000027855	hdlbpb	100	83.154	ENSXCOG00000001797	hdlbpb	100	83.154	Xiphophorus_couchianus
ENSLBEG00000027855	hdlbpb	100	94.479	ENSXMAG00000015633	hdlbpb	100	94.479	Xiphophorus_maculatus