EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000027917 (Gene tree)
Gene ID: 109992606
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 12076 bases
Position: chrFKLU01000236.1:700602-712677
Accession: 109992606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037413	Exo_endo_phos	PF03372.23	1.1e-20	1	1
ENSLBEP00000037404	Exo_endo_phos	PF03372.23	1.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000038964	-	1611	-	ENSLBEP00000037413	536 (aa)	-	-
ENSLBET00000038953	-	1690	XM_020645291	ENSLBEP00000037404	559 (aa)	XP_020500947	UPI0009B3F6B0

Gene Model

Click here to download ENSLBEG00000027917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000027917	cnot6b	100	73.166	ENSLBEG00000027202	cnot6l	100	73.166

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027917	cnot6b	100	84.794	ENSG00000113300	CNOT6	100	92.105	Homo_sapiens
ENSLBEG00000027917	cnot6b	100	96.959	ENSAPOG00000009994	cnot6b	100	96.959	Acanthochromis_polyacanthus
ENSLBEG00000027917	cnot6b	100	84.848	ENSAMEG00000000949	CNOT6	99	83.957	Ailuropoda_melanoleuca
ENSLBEG00000027917	cnot6b	100	94.454	ENSACIG00000016566	cnot6b	100	94.454	Amphilophus_citrinellus
ENSLBEG00000027917	cnot6b	100	96.959	ENSAOCG00000006893	cnot6b	100	96.959	Amphiprion_ocellaris
ENSLBEG00000027917	cnot6b	100	96.959	ENSAPEG00000016949	cnot6b	100	96.959	Amphiprion_percula
ENSLBEG00000027917	cnot6b	100	93.918	ENSATEG00000007862	cnot6b	100	93.918	Anabas_testudineus
ENSLBEG00000027917	cnot6b	100	85.331	ENSAPLG00000012715	CNOT6	99	84.794	Anas_platyrhynchos
ENSLBEG00000027917	cnot6b	100	85.152	ENSACAG00000016548	CNOT6	100	84.079	Anolis_carolinensis
ENSLBEG00000027917	cnot6b	100	84.794	ENSANAG00000030436	CNOT6	96	83.900	Aotus_nancymaae
ENSLBEG00000027917	cnot6b	100	95.528	ENSACLG00000008279	cnot6b	100	95.528	Astatotilapia_calliptera
ENSLBEG00000027917	cnot6b	100	89.982	ENSAMXG00000019140	cnot6a	100	89.803	Astyanax_mexicanus
ENSLBEG00000027917	cnot6b	100	88.551	ENSAMXG00000034694	cnot6b	100	87.478	Astyanax_mexicanus
ENSLBEG00000027917	cnot6b	100	85.152	ENSBTAG00000017362	CNOT6	100	84.258	Bos_taurus
ENSLBEG00000027917	cnot6b	100	84.973	ENSCJAG00000009795	CNOT6	100	84.079	Callithrix_jacchus
ENSLBEG00000027917	cnot6b	100	85.152	ENSCAFG00000000464	CNOT6	100	84.258	Canis_familiaris
ENSLBEG00000027917	cnot6b	100	85.152	ENSCAFG00020002441	CNOT6	100	84.258	Canis_lupus_dingo
ENSLBEG00000027917	cnot6b	100	84.794	ENSCHIG00000019100	CNOT6	100	83.900	Capra_hircus
ENSLBEG00000027917	cnot6b	100	83.542	ENSTSYG00000003982	CNOT6	100	82.648	Carlito_syrichta
ENSLBEG00000027917	cnot6b	100	80.322	ENSCPOG00000035657	CNOT6	100	79.428	Cavia_porcellus
ENSLBEG00000027917	cnot6b	100	80.322	ENSCCAG00000033670	CNOT6	100	79.428	Cebus_capucinus
ENSLBEG00000027917	cnot6b	100	84.794	ENSCATG00000042014	CNOT6	100	83.900	Cercocebus_atys
ENSLBEG00000027917	cnot6b	100	83.721	ENSCLAG00000010489	CNOT6	100	82.826	Chinchilla_lanigera
ENSLBEG00000027917	cnot6b	100	84.794	ENSCSAG00000008165	CNOT6	100	83.900	Chlorocebus_sabaeus
ENSLBEG00000027917	cnot6b	100	84.794	ENSCHOG00000009680	CNOT6	100	84.258	Choloepus_hoffmanni
ENSLBEG00000027917	cnot6b	100	85.510	ENSCPBG00000008908	CNOT6	100	84.973	Chrysemys_picta_bellii
ENSLBEG00000027917	cnot6b	100	84.973	ENSCANG00000026756	CNOT6	100	84.079	Colobus_angolensis_palliatus
ENSLBEG00000027917	cnot6b	100	83.363	ENSCGRG00001011452	Cnot6	100	82.469	Cricetulus_griseus_chok1gshd
ENSLBEG00000027917	cnot6b	100	81.395	ENSCGRG00000010407	Cnot6	100	80.501	Cricetulus_griseus_crigri
ENSLBEG00000027917	cnot6b	100	95.886	ENSCSEG00000010939	cnot6b	100	95.886	Cynoglossus_semilaevis
ENSLBEG00000027917	cnot6b	100	94.097	ENSCVAG00000010538	cnot6b	100	94.097	Cyprinodon_variegatus
ENSLBEG00000027917	cnot6b	100	86.941	ENSDARG00000101072	cnot6b	100	86.762	Danio_rerio
ENSLBEG00000027917	cnot6b	100	89.624	ENSDARG00000008255	cnot6a	100	89.445	Danio_rerio
ENSLBEG00000027917	cnot6b	100	85.689	ENSDNOG00000041644	CNOT6	100	84.794	Dasypus_novemcinctus
ENSLBEG00000027917	cnot6b	100	76.923	ENSDORG00000001708	Cnot6	100	76.029	Dipodomys_ordii
ENSLBEG00000027917	cnot6b	100	67.857	ENSETEG00000006975	CNOT6	100	66.964	Echinops_telfairi
ENSLBEG00000027917	cnot6b	90	80.080	ENSEASG00005012957	-	99	79.283	Equus_asinus_asinus
ENSLBEG00000027917	cnot6b	100	84.973	ENSEASG00005012794	-	100	84.079	Equus_asinus_asinus
ENSLBEG00000027917	cnot6b	100	85.510	ENSECAG00000019325	CNOT6	100	84.615	Equus_caballus
ENSLBEG00000027917	cnot6b	100	80.143	ENSECAG00000012704	-	99	79.249	Equus_caballus
ENSLBEG00000027917	cnot6b	100	84.079	ENSEEUG00000015382	CNOT6	100	83.184	Erinaceus_europaeus
ENSLBEG00000027917	cnot6b	100	87.299	ENSELUG00000024580	cnot6a	100	86.762	Esox_lucius
ENSLBEG00000027917	cnot6b	100	88.536	ENSELUG00000015981	cnot6b	99	87.478	Esox_lucius
ENSLBEG00000027917	cnot6b	100	85.331	ENSFCAG00000001881	CNOT6	100	84.436	Felis_catus
ENSLBEG00000027917	cnot6b	100	85.510	ENSFALG00000007699	CNOT6	100	84.973	Ficedula_albicollis
ENSLBEG00000027917	cnot6b	100	83.184	ENSFDAG00000001999	CNOT6	100	82.290	Fukomys_damarensis
ENSLBEG00000027917	cnot6b	71	94.375	ENSFHEG00000013756	cnot6b	99	94.375	Fundulus_heteroclitus
ENSLBEG00000027917	cnot6b	95	93.762	ENSGMOG00000009767	cnot6b	99	93.762	Gadus_morhua
ENSLBEG00000027917	cnot6b	100	85.331	ENSGALG00000034316	CNOT6	100	84.794	Gallus_gallus
ENSLBEG00000027917	cnot6b	100	94.454	ENSGAFG00000008525	cnot6b	100	94.454	Gambusia_affinis
ENSLBEG00000027917	cnot6b	95	94.518	ENSGACG00000018046	cnot6b	99	94.518	Gasterosteus_aculeatus
ENSLBEG00000027917	cnot6b	100	70.714	ENSGAGG00000012176	CNOT6	100	70.179	Gopherus_agassizii
ENSLBEG00000027917	cnot6b	100	84.794	ENSGGOG00000003675	CNOT6	100	83.900	Gorilla_gorilla
ENSLBEG00000027917	cnot6b	100	95.349	ENSHBUG00000002819	cnot6b	100	95.349	Haplochromis_burtoni
ENSLBEG00000027917	cnot6b	100	83.542	ENSHGLG00000017756	CNOT6	100	82.648	Heterocephalus_glaber_female
ENSLBEG00000027917	cnot6b	100	83.542	ENSHGLG00100005747	CNOT6	100	82.648	Heterocephalus_glaber_male
ENSLBEG00000027917	cnot6b	100	95.349	ENSHCOG00000016176	cnot6b	100	95.349	Hippocampus_comes
ENSLBEG00000027917	cnot6b	100	89.088	ENSIPUG00000019831	cnot6a	100	89.088	Ictalurus_punctatus
ENSLBEG00000027917	cnot6b	100	88.551	ENSIPUG00000017482	cnot6b	100	87.657	Ictalurus_punctatus
ENSLBEG00000027917	cnot6b	100	84.615	ENSSTOG00000002803	CNOT6	100	83.721	Ictidomys_tridecemlineatus
ENSLBEG00000027917	cnot6b	100	84.436	ENSJJAG00000012296	Cnot6	100	83.542	Jaculus_jaculus
ENSLBEG00000027917	cnot6b	100	94.097	ENSKMAG00000004640	cnot6b	100	94.097	Kryptolebias_marmoratus
ENSLBEG00000027917	cnot6b	100	92.308	ENSLOCG00000010102	cnot6b	99	91.592	Lepisosteus_oculatus
ENSLBEG00000027917	cnot6b	100	85.510	ENSLAFG00000016742	CNOT6	100	84.615	Loxodonta_africana
ENSLBEG00000027917	cnot6b	100	84.794	ENSMFAG00000030867	CNOT6	100	83.900	Macaca_fascicularis
ENSLBEG00000027917	cnot6b	100	84.794	ENSMMUG00000018690	CNOT6	100	83.900	Macaca_mulatta
ENSLBEG00000027917	cnot6b	100	84.794	ENSMNEG00000038565	CNOT6	100	83.900	Macaca_nemestrina
ENSLBEG00000027917	cnot6b	100	84.794	ENSMLEG00000010555	CNOT6	100	83.900	Mandrillus_leucophaeus
ENSLBEG00000027917	cnot6b	100	97.138	ENSMAMG00000007515	cnot6b	100	97.138	Mastacembelus_armatus
ENSLBEG00000027917	cnot6b	100	95.528	ENSMZEG00005012899	cnot6b	100	95.528	Maylandia_zebra
ENSLBEG00000027917	cnot6b	100	84.079	ENSMAUG00000019798	Cnot6	100	83.184	Mesocricetus_auratus
ENSLBEG00000027917	cnot6b	100	83.184	ENSMICG00000013018	-	100	82.290	Microcebus_murinus
ENSLBEG00000027917	cnot6b	98	76.740	ENSMICG00000028378	-	99	75.824	Microcebus_murinus
ENSLBEG00000027917	cnot6b	100	84.079	ENSMOCG00000021662	Cnot6	100	83.184	Microtus_ochrogaster
ENSLBEG00000027917	cnot6b	100	93.381	ENSMMOG00000003227	cnot6b	100	92.844	Mola_mola
ENSLBEG00000027917	cnot6b	100	84.794	ENSMODG00000003979	CNOT6	100	84.258	Monodelphis_domestica
ENSLBEG00000027917	cnot6b	100	96.601	ENSMALG00000014251	cnot6b	100	96.601	Monopterus_albus
ENSLBEG00000027917	cnot6b	100	84.258	MGP_CAROLIEiJ_G0016277	Cnot6	100	83.363	Mus_caroli
ENSLBEG00000027917	cnot6b	100	84.258	ENSMUSG00000020362	Cnot6	100	83.363	Mus_musculus
ENSLBEG00000027917	cnot6b	100	84.258	MGP_PahariEiJ_G0017413	Cnot6	100	83.363	Mus_pahari
ENSLBEG00000027917	cnot6b	100	84.258	MGP_SPRETEiJ_G0017122	Cnot6	100	83.363	Mus_spretus
ENSLBEG00000027917	cnot6b	100	85.510	ENSMPUG00000000587	CNOT6	96	84.615	Mustela_putorius_furo
ENSLBEG00000027917	cnot6b	100	84.043	ENSMLUG00000010257	CNOT6	100	83.156	Myotis_lucifugus
ENSLBEG00000027917	cnot6b	100	83.542	ENSNGAG00000008269	Cnot6	100	83.005	Nannospalax_galili
ENSLBEG00000027917	cnot6b	100	95.349	ENSNBRG00000010798	cnot6b	100	95.349	Neolamprologus_brichardi
ENSLBEG00000027917	cnot6b	100	83.721	ENSNLEG00000002322	CNOT6	100	82.826	Nomascus_leucogenys
ENSLBEG00000027917	cnot6b	81	82.407	ENSMEUG00000000025	CNOT6	81	81.019	Notamacropus_eugenii
ENSLBEG00000027917	cnot6b	88	85.000	ENSOPRG00000008244	-	88	85.000	Ochotona_princeps
ENSLBEG00000027917	cnot6b	100	83.184	ENSODEG00000007041	CNOT6	100	82.290	Octodon_degus
ENSLBEG00000027917	cnot6b	75	94.326	ENSONIG00000013027	cnot6b	99	94.326	Oreochromis_niloticus
ENSLBEG00000027917	cnot6b	100	85.510	ENSOANG00000010226	CNOT6	100	84.615	Ornithorhynchus_anatinus
ENSLBEG00000027917	cnot6b	100	83.957	ENSOCUG00000011083	CNOT6	100	83.066	Oryctolagus_cuniculus
ENSLBEG00000027917	cnot6b	100	95.170	ENSORLG00000005059	cnot6b	100	95.170	Oryzias_latipes
ENSLBEG00000027917	cnot6b	100	95.170	ENSORLG00020012784	cnot6b	100	95.170	Oryzias_latipes_hni
ENSLBEG00000027917	cnot6b	94	94.837	ENSORLG00015022658	cnot6b	98	94.837	Oryzias_latipes_hsok
ENSLBEG00000027917	cnot6b	100	95.707	ENSOMEG00000005295	cnot6b	100	95.707	Oryzias_melastigma
ENSLBEG00000027917	cnot6b	94	84.221	ENSOGAG00000032470	CNOT6	100	83.270	Otolemur_garnettii
ENSLBEG00000027917	cnot6b	97	84.191	ENSOARG00000001003	CNOT6	100	83.272	Ovis_aries
ENSLBEG00000027917	cnot6b	100	84.794	ENSPPAG00000032253	CNOT6	100	83.900	Pan_paniscus
ENSLBEG00000027917	cnot6b	100	85.152	ENSPPRG00000011912	CNOT6	100	84.258	Panthera_pardus
ENSLBEG00000027917	cnot6b	100	85.152	ENSPTIG00000016794	CNOT6	100	84.258	Panthera_tigris_altaica
ENSLBEG00000027917	cnot6b	100	84.794	ENSPTRG00000017636	CNOT6	100	83.900	Pan_troglodytes
ENSLBEG00000027917	cnot6b	100	84.794	ENSPANG00000016191	CNOT6	100	83.900	Papio_anubis
ENSLBEG00000027917	cnot6b	100	89.982	ENSPKIG00000021368	cnot6b	100	89.267	Paramormyrops_kingsleyae
ENSLBEG00000027917	cnot6b	98	85.348	ENSPSIG00000017307	CNOT6	100	84.799	Pelodiscus_sinensis
ENSLBEG00000027917	cnot6b	100	95.170	ENSPMGG00000011238	cnot6b	100	95.170	Periophthalmus_magnuspinnatus
ENSLBEG00000027917	cnot6b	100	83.542	ENSPEMG00000000627	Cnot6	100	83.005	Peromyscus_maniculatus_bairdii
ENSLBEG00000027917	cnot6b	100	84.794	ENSPCIG00000020319	CNOT6	99	84.258	Phascolarctos_cinereus
ENSLBEG00000027917	cnot6b	100	95.170	ENSPFOG00000006291	cnot6b	100	95.170	Poecilia_formosa
ENSLBEG00000027917	cnot6b	100	95.709	ENSPLAG00000008266	cnot6b	100	95.709	Poecilia_latipinna
ENSLBEG00000027917	cnot6b	100	95.349	ENSPMEG00000009091	cnot6b	100	95.349	Poecilia_mexicana
ENSLBEG00000027917	cnot6b	100	93.023	ENSPREG00000003713	cnot6b	100	93.023	Poecilia_reticulata
ENSLBEG00000027917	cnot6b	100	84.794	ENSPPYG00000016137	CNOT6	100	83.900	Pongo_abelii
ENSLBEG00000027917	cnot6b	62	91.892	ENSPCAG00000005599	-	59	91.892	Procavia_capensis
ENSLBEG00000027917	cnot6b	100	79.070	ENSPCOG00000017359	CNOT6	100	78.891	Propithecus_coquereli
ENSLBEG00000027917	cnot6b	100	81.753	ENSPVAG00000003069	CNOT6	100	80.859	Pteropus_vampyrus
ENSLBEG00000027917	cnot6b	100	95.349	ENSPNYG00000000321	cnot6b	100	95.349	Pundamilia_nyererei
ENSLBEG00000027917	cnot6b	100	90.340	ENSPNAG00000029586	cnot6a	100	90.161	Pygocentrus_nattereri
ENSLBEG00000027917	cnot6b	100	89.088	ENSPNAG00000028816	cnot6b	100	88.193	Pygocentrus_nattereri
ENSLBEG00000027917	cnot6b	100	83.721	ENSRNOG00000054891	Cnot6	100	82.826	Rattus_norvegicus
ENSLBEG00000027917	cnot6b	100	84.615	ENSRBIG00000004309	CNOT6	100	83.721	Rhinopithecus_bieti
ENSLBEG00000027917	cnot6b	100	84.615	ENSRROG00000035378	CNOT6	100	83.721	Rhinopithecus_roxellana
ENSLBEG00000027917	cnot6b	100	84.973	ENSSBOG00000030494	CNOT6	100	84.258	Saimiri_boliviensis_boliviensis
ENSLBEG00000027917	cnot6b	100	84.794	ENSSHAG00000017436	CNOT6	100	84.258	Sarcophilus_harrisii
ENSLBEG00000027917	cnot6b	100	89.982	ENSSFOG00015022383	cnot6a	96	89.088	Scleropages_formosus
ENSLBEG00000027917	cnot6b	100	91.771	ENSSFOG00015015133	CNOT6	100	91.234	Scleropages_formosus
ENSLBEG00000027917	cnot6b	100	96.064	ENSSMAG00000003084	cnot6b	100	96.064	Scophthalmus_maximus
ENSLBEG00000027917	cnot6b	100	97.317	ENSSDUG00000004151	cnot6b	100	97.317	Seriola_dumerili
ENSLBEG00000027917	cnot6b	100	97.496	ENSSLDG00000004448	cnot6b	100	97.496	Seriola_lalandi_dorsalis
ENSLBEG00000027917	cnot6b	64	66.574	ENSSARG00000012650	-	100	66.574	Sorex_araneus
ENSLBEG00000027917	cnot6b	100	85.821	ENSSPUG00000007893	CNOT6	100	85.261	Sphenodon_punctatus
ENSLBEG00000027917	cnot6b	100	97.138	ENSSPAG00000000149	cnot6b	100	97.138	Stegastes_partitus
ENSLBEG00000027917	cnot6b	100	84.973	ENSSSCG00000014009	CNOT6	100	84.079	Sus_scrofa
ENSLBEG00000027917	cnot6b	100	85.152	ENSTGUG00000001119	CNOT6	100	84.615	Taeniopygia_guttata
ENSLBEG00000027917	cnot6b	100	91.592	ENSTRUG00000002818	cnot6b	100	91.055	Takifugu_rubripes
ENSLBEG00000027917	cnot6b	100	92.487	ENSTNIG00000004443	cnot6b	99	91.950	Tetraodon_nigroviridis
ENSLBEG00000027917	cnot6b	76	73.134	ENSTBEG00000017094	-	87	73.134	Tupaia_belangeri
ENSLBEG00000027917	cnot6b	100	84.794	ENSTTRG00000009363	CNOT6	100	83.900	Tursiops_truncatus
ENSLBEG00000027917	cnot6b	90	74.802	ENSUAMG00000004579	CNOT6	99	73.810	Ursus_americanus
ENSLBEG00000027917	cnot6b	100	81.058	ENSUMAG00000024577	CNOT6	100	80.205	Ursus_maritimus
ENSLBEG00000027917	cnot6b	84	89.189	ENSVPAG00000003593	CNOT6	83	89.189	Vicugna_pacos
ENSLBEG00000027917	cnot6b	100	85.152	ENSVVUG00000026940	CNOT6	100	84.258	Vulpes_vulpes
ENSLBEG00000027917	cnot6b	100	95.709	ENSXCOG00000003360	cnot6b	100	95.709	Xiphophorus_couchianus
ENSLBEG00000027917	cnot6b	100	95.709	ENSXMAG00000008730	cnot6b	100	95.709	Xiphophorus_maculatus