EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000027981 (Gene tree)
Gene ID: 110001469
Gene Symbol: -
Alias: -
Full Name: R3H domain-containing protein 1-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 26503 bases
Position: chrFKLU01000806.1:107888-134390
Accession: 110001469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037498	R3H	PF01424.22	1.5e-12	1	1
ENSLBEP00000037488	R3H	PF01424.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039049	-	3388	-	ENSLBEP00000037498	452 (aa)	-	-
ENSLBET00000039039	-	3406	XM_020656963	ENSLBEP00000037488	458 (aa)	XP_020512619	-

Gene Model

Click here to download ENSLBEG00000027981's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027981's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027981	-	87	63.682	ENSG00000048991	R3HDM1	68	75.000	Homo_sapiens
ENSLBEG00000027981	-	88	76.119	ENSACIG00000018791	-	81	74.576	Amphilophus_citrinellus
ENSLBEG00000027981	-	99	55.248	ENSCAFG00020016119	R3HDM1	90	54.653	Canis_lupus_dingo
ENSLBEG00000027981	-	57	51.880	ENSCAPG00000013043	-	100	51.880	Cavia_aperea
ENSLBEG00000027981	-	94	58.676	ENSCPOG00000012784	R3HDM1	100	59.567	Cavia_porcellus
ENSLBEG00000027981	-	87	63.275	ENSCLAG00000007962	R3HDM1	100	57.338	Chinchilla_lanigera
ENSLBEG00000027981	-	94	60.592	ENSCGRG00000012080	R3hdm1	100	58.020	Cricetulus_griseus_crigri
ENSLBEG00000027981	-	57	57.679	ENSDORG00000027689	-	100	57.679	Dipodomys_ordii
ENSLBEG00000027981	-	86	49.392	ENSEBUG00000014746	arpp21	62	49.144	Eptatretus_burgeri
ENSLBEG00000027981	-	87	64.691	ENSFDAG00000016478	R3HDM1	100	58.020	Fukomys_damarensis
ENSLBEG00000027981	-	99	81.441	ENSFHEG00000018713	r3hdm1	52	76.434	Fundulus_heteroclitus
ENSLBEG00000027981	-	99	55.847	ENSGGOG00000008156	R3HDM1	51	55.847	Gorilla_gorilla
ENSLBEG00000027981	-	99	81.930	ENSHBUG00000015737	R3HDM1	87	81.930	Haplochromis_burtoni
ENSLBEG00000027981	-	94	61.872	ENSHGLG00000015718	R3HDM1	100	58.703	Heterocephalus_glaber_female
ENSLBEG00000027981	-	94	61.872	ENSHGLG00100003184	-	100	59.044	Heterocephalus_glaber_male
ENSLBEG00000027981	-	99	73.614	ENSHCOG00000013366	r3hdm1	88	75.186	Hippocampus_comes
ENSLBEG00000027981	-	94	60.959	ENSSTOG00000007572	R3HDM1	100	58.362	Ictidomys_tridecemlineatus
ENSLBEG00000027981	-	57	59.044	ENSJJAG00000018208	-	100	59.044	Jaculus_jaculus
ENSLBEG00000027981	-	64	81.667	ENSKMAG00000013373	-	86	81.667	Kryptolebias_marmoratus
ENSLBEG00000027981	-	94	60.277	ENSMAUG00000010315	R3hdm1	100	58.020	Mesocricetus_auratus
ENSLBEG00000027981	-	94	60.592	ENSMOCG00000019833	-	100	57.679	Microtus_ochrogaster
ENSLBEG00000027981	-	94	60.820	MGP_CAROLIEiJ_G0014543	R3hdm1	100	62.857	Mus_caroli
ENSLBEG00000027981	-	94	60.820	ENSMUSG00000056211	R3hdm1	100	62.857	Mus_musculus
ENSLBEG00000027981	-	94	60.731	MGP_PahariEiJ_G0027779	R3hdm1	100	62.857	Mus_pahari
ENSLBEG00000027981	-	94	60.820	MGP_SPRETEiJ_G0015350	R3hdm1	100	62.857	Mus_spretus
ENSLBEG00000027981	-	57	57.338	ENSNGAG00000001313	-	100	57.338	Nannospalax_galili
ENSLBEG00000027981	-	99	40.504	ENSMEUG00000011784	R3HDM1	50	42.209	Notamacropus_eugenii
ENSLBEG00000027981	-	87	63.184	ENSODEG00000008607	R3HDM1	100	57.679	Octodon_degus
ENSLBEG00000027981	-	83	78.442	ENSORLG00020019252	-	92	80.939	Oryzias_latipes_hni
ENSLBEG00000027981	-	99	78.982	ENSORLG00015017355	r3hdm1	50	75.155	Oryzias_latipes_hsok
ENSLBEG00000027981	-	99	75.000	ENSOMEG00000003882	-	91	75.000	Oryzias_melastigma
ENSLBEG00000027981	-	99	59.737	ENSPKIG00000011224	R3HDM1	88	59.300	Paramormyrops_kingsleyae
ENSLBEG00000027981	-	85	75.718	ENSPMGG00000011264	-	80	75.718	Periophthalmus_magnuspinnatus
ENSLBEG00000027981	-	94	60.364	ENSPEMG00000015187	R3hdm1	100	58.020	Peromyscus_maniculatus_bairdii
ENSLBEG00000027981	-	99	81.264	ENSPREG00000007902	r3hdm1	87	79.227	Poecilia_reticulata
ENSLBEG00000027981	-	82	81.683	ENSPNYG00000008701	-	98	82.620	Pundamilia_nyererei
ENSLBEG00000027981	-	99	56.108	ENSSFOG00015019851	-	51	57.676	Scleropages_formosus
ENSLBEG00000027981	-	99	59.570	ENSUAMG00000024806	R3HDM1	70	63.158	Ursus_americanus
ENSLBEG00000027981	-	88	83.416	ENSXCOG00000017448	r3hdm1	52	83.416	Xiphophorus_couchianus