EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000027999 (Gene tree)
Gene ID: 109981811
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9958 bases
Position: chrFKLU01000036.1:1625731-1635688
Accession: 109981811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037511	AD	PF09793.9	3.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039063	-	2799	XM_020630771	ENSLBEP00000037511	196 (aa)	XP_020486427	UPI0009B347D9

Gene Model

Click here to download ENSLBEG00000027999's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000027999's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000027999	lsm12b	100	85.714	ENSG00000161654	LSM12	100	85.714	Homo_sapiens
ENSLBEG00000027999	lsm12b	100	98.980	ENSAPOG00000007907	lsm12b	100	98.980	Acanthochromis_polyacanthus
ENSLBEG00000027999	lsm12b	100	83.920	ENSAMEG00000018321	LSM12	100	83.920	Ailuropoda_melanoleuca
ENSLBEG00000027999	lsm12b	100	97.449	ENSACIG00000008538	lsm12b	100	97.449	Amphilophus_citrinellus
ENSLBEG00000027999	lsm12b	100	99.490	ENSAOCG00000021847	lsm12b	88	99.490	Amphiprion_ocellaris
ENSLBEG00000027999	lsm12b	100	99.490	ENSAPEG00000002252	lsm12b	100	99.490	Amphiprion_percula
ENSLBEG00000027999	lsm12b	100	97.959	ENSATEG00000005705	lsm12b	100	97.959	Anabas_testudineus
ENSLBEG00000027999	lsm12b	100	84.694	ENSACAG00000004618	LSM12	100	84.694	Anolis_carolinensis
ENSLBEG00000027999	lsm12b	100	85.714	ENSANAG00000029011	LSM12	100	85.714	Aotus_nancymaae
ENSLBEG00000027999	lsm12b	100	97.959	ENSACLG00000026332	lsm12b	100	97.959	Astatotilapia_calliptera
ENSLBEG00000027999	lsm12b	100	86.735	ENSAMXG00000036117	lsm12a	91	86.735	Astyanax_mexicanus
ENSLBEG00000027999	lsm12b	100	94.898	ENSAMXG00000032952	lsm12b	100	94.898	Astyanax_mexicanus
ENSLBEG00000027999	lsm12b	100	85.714	ENSBTAG00000016252	LSM12	100	85.714	Bos_taurus
ENSLBEG00000027999	lsm12b	100	85.714	ENSCJAG00000048480	LSM12	100	85.714	Callithrix_jacchus
ENSLBEG00000027999	lsm12b	100	85.714	ENSCAFG00000014379	LSM12	92	85.714	Canis_familiaris
ENSLBEG00000027999	lsm12b	100	85.714	ENSCAFG00020012173	LSM12	100	85.714	Canis_lupus_dingo
ENSLBEG00000027999	lsm12b	100	85.714	ENSCHIG00000018175	LSM12	100	85.714	Capra_hircus
ENSLBEG00000027999	lsm12b	100	85.714	ENSTSYG00000036361	LSM12	100	85.714	Carlito_syrichta
ENSLBEG00000027999	lsm12b	83	81.481	ENSCAPG00000009647	LSM12	89	81.481	Cavia_aperea
ENSLBEG00000027999	lsm12b	100	84.694	ENSCPOG00000012860	LSM12	100	84.694	Cavia_porcellus
ENSLBEG00000027999	lsm12b	100	85.714	ENSCCAG00000032905	LSM12	100	85.714	Cebus_capucinus
ENSLBEG00000027999	lsm12b	100	85.714	ENSCATG00000030577	-	100	85.714	Cercocebus_atys
ENSLBEG00000027999	lsm12b	100	85.204	ENSCLAG00000015759	LSM12	100	85.204	Chinchilla_lanigera
ENSLBEG00000027999	lsm12b	100	86.224	ENSCSAG00000003486	LSM12	100	86.224	Chlorocebus_sabaeus
ENSLBEG00000027999	lsm12b	56	86.239	ENSCHOG00000001198	LSM12	100	86.239	Choloepus_hoffmanni
ENSLBEG00000027999	lsm12b	100	86.224	ENSCPBG00000027105	LSM12	100	86.224	Chrysemys_picta_bellii
ENSLBEG00000027999	lsm12b	100	85.714	ENSCANG00000043328	LSM12	100	85.714	Colobus_angolensis_palliatus
ENSLBEG00000027999	lsm12b	100	85.714	ENSCGRG00001002094	Lsm12	100	85.714	Cricetulus_griseus_chok1gshd
ENSLBEG00000027999	lsm12b	89	77.586	ENSCGRG00000004316	Lsm12	98	77.586	Cricetulus_griseus_crigri
ENSLBEG00000027999	lsm12b	100	97.959	ENSCSEG00000008434	lsm12b	100	97.959	Cynoglossus_semilaevis
ENSLBEG00000027999	lsm12b	100	97.449	ENSCVAG00000008755	lsm12b	100	97.449	Cyprinodon_variegatus
ENSLBEG00000027999	lsm12b	100	87.755	ENSDARG00000028848	lsm12a	100	87.755	Danio_rerio
ENSLBEG00000027999	lsm12b	100	95.918	ENSDARG00000109510	lsm12b	100	95.918	Danio_rerio
ENSLBEG00000027999	lsm12b	100	85.714	ENSDNOG00000002418	LSM12	91	85.714	Dasypus_novemcinctus
ENSLBEG00000027999	lsm12b	100	85.714	ENSDORG00000016381	Lsm12	100	85.714	Dipodomys_ordii
ENSLBEG00000027999	lsm12b	73	32.911	FBgn0036057	CG14164	83	32.911	Drosophila_melanogaster
ENSLBEG00000027999	lsm12b	83	34.337	FBgn0030364	Lsm12	76	34.337	Drosophila_melanogaster
ENSLBEG00000027999	lsm12b	100	85.204	ENSETEG00000008374	LSM12	100	85.204	Echinops_telfairi
ENSLBEG00000027999	lsm12b	88	76.301	ENSETEG00000011012	-	99	76.301	Echinops_telfairi
ENSLBEG00000027999	lsm12b	85	67.665	ENSEBUG00000016299	lsm12a	92	67.665	Eptatretus_burgeri
ENSLBEG00000027999	lsm12b	100	85.714	ENSEASG00005010155	LSM12	100	85.714	Equus_asinus_asinus
ENSLBEG00000027999	lsm12b	100	85.714	ENSECAG00000009071	LSM12	100	85.714	Equus_caballus
ENSLBEG00000027999	lsm12b	78	85.621	ENSEEUG00000002419	-	100	85.621	Erinaceus_europaeus
ENSLBEG00000027999	lsm12b	100	94.898	ENSELUG00000015538	lsm12b	100	90.306	Esox_lucius
ENSLBEG00000027999	lsm12b	100	93.367	ENSELUG00000000256	-	100	93.367	Esox_lucius
ENSLBEG00000027999	lsm12b	100	85.714	ENSFCAG00000037021	LSM12	100	85.714	Felis_catus
ENSLBEG00000027999	lsm12b	80	82.051	ENSFDAG00000008954	LSM12	91	82.051	Fukomys_damarensis
ENSLBEG00000027999	lsm12b	100	97.449	ENSFHEG00000019913	lsm12b	100	97.449	Fundulus_heteroclitus
ENSLBEG00000027999	lsm12b	81	98.101	ENSGMOG00000015449	lsm12b	100	98.101	Gadus_morhua
ENSLBEG00000027999	lsm12b	78	86.275	ENSGALG00000039803	LSM12	100	86.275	Gallus_gallus
ENSLBEG00000027999	lsm12b	100	97.449	ENSGAFG00000011829	lsm12b	100	97.449	Gambusia_affinis
ENSLBEG00000027999	lsm12b	81	98.734	ENSGACG00000003428	lsm12b	100	98.734	Gasterosteus_aculeatus
ENSLBEG00000027999	lsm12b	100	85.204	ENSGAGG00000021965	LSM12	100	85.204	Gopherus_agassizii
ENSLBEG00000027999	lsm12b	100	85.714	ENSGGOG00000010589	-	100	85.714	Gorilla_gorilla
ENSLBEG00000027999	lsm12b	85	97.605	ENSHBUG00000007667	lsm12b	74	97.605	Haplochromis_burtoni
ENSLBEG00000027999	lsm12b	100	85.714	ENSHGLG00000011411	LSM12	100	85.714	Heterocephalus_glaber_female
ENSLBEG00000027999	lsm12b	79	85.065	ENSHGLG00100000241	LSM12	82	85.065	Heterocephalus_glaber_male
ENSLBEG00000027999	lsm12b	100	96.429	ENSHCOG00000002094	lsm12b	100	96.429	Hippocampus_comes
ENSLBEG00000027999	lsm12b	99	83.505	ENSIPUG00000008936	lsm12a	99	83.505	Ictalurus_punctatus
ENSLBEG00000027999	lsm12b	100	95.408	ENSIPUG00000014800	lsm12	100	95.408	Ictalurus_punctatus
ENSLBEG00000027999	lsm12b	100	85.714	ENSSTOG00000007403	LSM12	100	85.714	Ictidomys_tridecemlineatus
ENSLBEG00000027999	lsm12b	80	73.585	ENSJJAG00000014652	-	95	73.585	Jaculus_jaculus
ENSLBEG00000027999	lsm12b	96	76.316	ENSJJAG00000011793	-	100	76.316	Jaculus_jaculus
ENSLBEG00000027999	lsm12b	100	84.694	ENSJJAG00000004364	-	100	85.455	Jaculus_jaculus
ENSLBEG00000027999	lsm12b	85	97.006	ENSKMAG00000007704	lsm12b	56	97.006	Kryptolebias_marmoratus
ENSLBEG00000027999	lsm12b	100	88.776	ENSLACG00000015981	LSM12	100	88.776	Latimeria_chalumnae
ENSLBEG00000027999	lsm12b	100	93.367	ENSLOCG00000013079	lsm12b	99	93.367	Lepisosteus_oculatus
ENSLBEG00000027999	lsm12b	100	85.714	ENSLAFG00000005202	LSM12	100	85.714	Loxodonta_africana
ENSLBEG00000027999	lsm12b	100	85.714	ENSMFAG00000031376	LSM12	100	85.714	Macaca_fascicularis
ENSLBEG00000027999	lsm12b	65	74.713	ENSMMUG00000042106	-	100	74.713	Macaca_mulatta
ENSLBEG00000027999	lsm12b	100	85.714	ENSMMUG00000006804	LSM12	100	85.714	Macaca_mulatta
ENSLBEG00000027999	lsm12b	100	85.714	ENSMNEG00000030594	-	100	85.714	Macaca_nemestrina
ENSLBEG00000027999	lsm12b	100	85.714	ENSMLEG00000039934	LSM12	100	85.714	Mandrillus_leucophaeus
ENSLBEG00000027999	lsm12b	100	98.980	ENSMAMG00000004279	lsm12b	100	98.980	Mastacembelus_armatus
ENSLBEG00000027999	lsm12b	100	97.959	ENSMZEG00005005754	lsm12b	100	97.959	Maylandia_zebra
ENSLBEG00000027999	lsm12b	100	86.224	ENSMICG00000037219	LSM12	100	86.224	Microcebus_murinus
ENSLBEG00000027999	lsm12b	100	73.469	ENSMOCG00000017015	-	86	73.469	Microtus_ochrogaster
ENSLBEG00000027999	lsm12b	100	85.714	ENSMOCG00000019878	-	100	85.714	Microtus_ochrogaster
ENSLBEG00000027999	lsm12b	100	98.980	ENSMMOG00000020848	lsm12b	100	98.980	Mola_mola
ENSLBEG00000027999	lsm12b	100	98.980	ENSMALG00000007578	lsm12b	100	98.980	Monopterus_albus
ENSLBEG00000027999	lsm12b	100	85.204	MGP_CAROLIEiJ_G0017241	Lsm12	100	85.204	Mus_caroli
ENSLBEG00000027999	lsm12b	100	85.714	ENSMUSG00000020922	Lsm12	100	85.714	Mus_musculus
ENSLBEG00000027999	lsm12b	100	78.873	MGP_PahariEiJ_G0018371	Lsm12	100	78.873	Mus_pahari
ENSLBEG00000027999	lsm12b	100	85.204	MGP_SPRETEiJ_G0018084	Lsm12	100	85.204	Mus_spretus
ENSLBEG00000027999	lsm12b	100	86.224	ENSMLUG00000006391	LSM12	100	86.224	Myotis_lucifugus
ENSLBEG00000027999	lsm12b	100	59.113	ENSNGAG00000015429	-	100	59.113	Nannospalax_galili
ENSLBEG00000027999	lsm12b	100	85.714	ENSNGAG00000001870	Lsm12	100	85.714	Nannospalax_galili
ENSLBEG00000027999	lsm12b	100	97.959	ENSNBRG00000006266	lsm12b	100	97.959	Neolamprologus_brichardi
ENSLBEG00000027999	lsm12b	100	85.714	ENSNLEG00000005580	-	100	85.714	Nomascus_leucogenys
ENSLBEG00000027999	lsm12b	85	85.542	ENSMEUG00000007501	-	100	85.542	Notamacropus_eugenii
ENSLBEG00000027999	lsm12b	100	85.714	ENSOPRG00000008552	LSM12	100	85.714	Ochotona_princeps
ENSLBEG00000027999	lsm12b	100	78.061	ENSODEG00000007886	-	74	78.061	Octodon_degus
ENSLBEG00000027999	lsm12b	99	85.567	ENSODEG00000017998	-	99	85.567	Octodon_degus
ENSLBEG00000027999	lsm12b	100	97.959	ENSONIG00000007933	lsm12b	100	97.959	Oreochromis_niloticus
ENSLBEG00000027999	lsm12b	99	79.487	ENSOCUG00000024823	-	100	79.487	Oryctolagus_cuniculus
ENSLBEG00000027999	lsm12b	99	80.513	ENSOCUG00000021254	-	100	80.513	Oryctolagus_cuniculus
ENSLBEG00000027999	lsm12b	100	83.920	ENSOCUG00000008566	-	100	83.920	Oryctolagus_cuniculus
ENSLBEG00000027999	lsm12b	99	80.000	ENSOCUG00000027889	-	100	80.000	Oryctolagus_cuniculus
ENSLBEG00000027999	lsm12b	100	97.959	ENSORLG00000011310	lsm12b	100	97.959	Oryzias_latipes
ENSLBEG00000027999	lsm12b	100	97.959	ENSORLG00020002060	lsm12b	92	97.959	Oryzias_latipes_hni
ENSLBEG00000027999	lsm12b	100	97.959	ENSORLG00015001647	lsm12b	92	97.959	Oryzias_latipes_hsok
ENSLBEG00000027999	lsm12b	100	98.980	ENSOMEG00000006184	lsm12b	92	98.980	Oryzias_melastigma
ENSLBEG00000027999	lsm12b	100	86.224	ENSOGAG00000010489	LSM12	100	86.224	Otolemur_garnettii
ENSLBEG00000027999	lsm12b	100	82.673	ENSOARG00000006589	LSM12	100	82.673	Ovis_aries
ENSLBEG00000027999	lsm12b	100	76.020	ENSPPAG00000034974	-	100	76.020	Pan_paniscus
ENSLBEG00000027999	lsm12b	100	85.714	ENSPPRG00000023420	LSM12	100	85.714	Panthera_pardus
ENSLBEG00000027999	lsm12b	72	84.545	ENSPTIG00000014850	-	100	84.545	Panthera_tigris_altaica
ENSLBEG00000027999	lsm12b	78	85.621	ENSPTIG00000012704	-	82	85.621	Panthera_tigris_altaica
ENSLBEG00000027999	lsm12b	100	85.714	ENSPTRG00000009261	LSM12	100	85.714	Pan_troglodytes
ENSLBEG00000027999	lsm12b	100	85.714	ENSPANG00000021315	-	100	85.714	Papio_anubis
ENSLBEG00000027999	lsm12b	100	93.878	ENSPKIG00000021058	lsm12b	100	93.878	Paramormyrops_kingsleyae
ENSLBEG00000027999	lsm12b	100	84.694	ENSPKIG00000017932	-	100	84.694	Paramormyrops_kingsleyae
ENSLBEG00000027999	lsm12b	100	97.959	ENSPMGG00000021344	lsm12b	100	97.959	Periophthalmus_magnuspinnatus
ENSLBEG00000027999	lsm12b	100	85.714	ENSPEMG00000012199	Lsm12	100	85.714	Peromyscus_maniculatus_bairdii
ENSLBEG00000027999	lsm12b	89	68.000	ENSPMAG00000005461	lsm12a	99	68.000	Petromyzon_marinus
ENSLBEG00000027999	lsm12b	100	85.714	ENSPCIG00000020244	LSM12	100	85.714	Phascolarctos_cinereus
ENSLBEG00000027999	lsm12b	100	96.429	ENSPFOG00000015930	lsm12b	100	96.429	Poecilia_formosa
ENSLBEG00000027999	lsm12b	100	96.429	ENSPLAG00000021089	lsm12b	100	96.429	Poecilia_latipinna
ENSLBEG00000027999	lsm12b	100	96.429	ENSPMEG00000012961	lsm12b	100	96.429	Poecilia_mexicana
ENSLBEG00000027999	lsm12b	87	97.661	ENSPREG00000010236	lsm12b	95	97.661	Poecilia_reticulata
ENSLBEG00000027999	lsm12b	100	85.714	ENSPPYG00000008344	LSM12	100	85.714	Pongo_abelii
ENSLBEG00000027999	lsm12b	81	86.164	ENSPCAG00000008790	LSM12	100	86.164	Procavia_capensis
ENSLBEG00000027999	lsm12b	100	85.714	ENSPCOG00000027951	LSM12	100	85.714	Propithecus_coquereli
ENSLBEG00000027999	lsm12b	100	86.224	ENSPVAG00000013706	LSM12	100	86.224	Pteropus_vampyrus
ENSLBEG00000027999	lsm12b	100	97.959	ENSPNYG00000003386	lsm12b	100	97.959	Pundamilia_nyererei
ENSLBEG00000027999	lsm12b	100	94.388	ENSPNAG00000004186	lsm12b	100	94.388	Pygocentrus_nattereri
ENSLBEG00000027999	lsm12b	100	85.714	ENSPNAG00000018435	lsm12a	100	85.714	Pygocentrus_nattereri
ENSLBEG00000027999	lsm12b	100	85.714	ENSRNOG00000020894	Lsm12	100	85.714	Rattus_norvegicus
ENSLBEG00000027999	lsm12b	100	85.714	ENSRBIG00000027910	LSM12	100	85.714	Rhinopithecus_bieti
ENSLBEG00000027999	lsm12b	99	53.608	ENSRROG00000000537	-	99	53.608	Rhinopithecus_roxellana
ENSLBEG00000027999	lsm12b	100	85.714	ENSRROG00000045530	-	100	85.714	Rhinopithecus_roxellana
ENSLBEG00000027999	lsm12b	100	85.714	ENSSBOG00000025310	LSM12	100	85.714	Saimiri_boliviensis_boliviensis
ENSLBEG00000027999	lsm12b	81	84.177	ENSSHAG00000014914	LSM12	100	84.177	Sarcophilus_harrisii
ENSLBEG00000027999	lsm12b	100	95.408	ENSSFOG00015009612	lsm12	100	95.408	Scleropages_formosus
ENSLBEG00000027999	lsm12b	100	94.898	ENSSFOG00015020392	lsm12a	100	94.898	Scleropages_formosus
ENSLBEG00000027999	lsm12b	100	98.980	ENSSMAG00000008089	lsm12b	100	98.980	Scophthalmus_maximus
ENSLBEG00000027999	lsm12b	100	98.980	ENSSDUG00000012711	lsm12b	100	98.980	Seriola_dumerili
ENSLBEG00000027999	lsm12b	100	98.980	ENSSLDG00000007404	lsm12b	100	98.980	Seriola_lalandi_dorsalis
ENSLBEG00000027999	lsm12b	78	84.967	ENSSARG00000005537	LSM12	100	84.967	Sorex_araneus
ENSLBEG00000027999	lsm12b	100	86.224	ENSSPUG00000011984	LSM12	100	86.224	Sphenodon_punctatus
ENSLBEG00000027999	lsm12b	100	99.490	ENSSPAG00000017058	lsm12b	100	99.490	Stegastes_partitus
ENSLBEG00000027999	lsm12b	100	85.714	ENSSSCG00000032394	LSM12	100	85.714	Sus_scrofa
ENSLBEG00000027999	lsm12b	100	97.959	ENSTRUG00000007121	lsm12b	100	97.959	Takifugu_rubripes
ENSLBEG00000027999	lsm12b	100	96.939	ENSTNIG00000014436	lsm12b	100	96.939	Tetraodon_nigroviridis
ENSLBEG00000027999	lsm12b	100	85.204	ENSTBEG00000012523	-	100	85.204	Tupaia_belangeri
ENSLBEG00000027999	lsm12b	100	83.163	ENSTBEG00000012392	-	100	83.163	Tupaia_belangeri
ENSLBEG00000027999	lsm12b	100	85.714	ENSTTRG00000010433	LSM12	100	85.714	Tursiops_truncatus
ENSLBEG00000027999	lsm12b	100	85.714	ENSUAMG00000006313	LSM12	100	85.714	Ursus_americanus
ENSLBEG00000027999	lsm12b	81	82.911	ENSUMAG00000012987	LSM12	90	82.911	Ursus_maritimus
ENSLBEG00000027999	lsm12b	100	81.122	ENSVPAG00000011145	LSM12	100	81.122	Vicugna_pacos
ENSLBEG00000027999	lsm12b	100	85.714	ENSVVUG00000017581	LSM12	100	85.714	Vulpes_vulpes
ENSLBEG00000027999	lsm12b	82	61.250	ENSXETG00000003371	lsm12	77	61.250	Xenopus_tropicalis
ENSLBEG00000027999	lsm12b	100	97.449	ENSXCOG00000003994	lsm12b	100	97.449	Xiphophorus_couchianus
ENSLBEG00000027999	lsm12b	100	97.449	ENSXMAG00000020950	lsm12b	100	97.449	Xiphophorus_maculatus