EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000028046 (Gene tree)
Gene ID: 109993392
Gene Symbol: -
Alias: -
Full Name: tetratricopeptide repeat protein 31-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 11821 bases
Position: chrFKLU01000256.1:663008-674828
Accession: 109993392
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037580	RRM_1	PF00076.22	6.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039131	-	3303	XM_020646345	ENSLBEP00000037580	642 (aa)	XP_020502001	UPI0009B4D1CE

Gene Model

Click here to download ENSLBEG00000028046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000028046	-	51	40.476	ENSLBEG00000017203	-	86	33.712
ENSLBEG00000028046	-	51	40.541	ENSLBEG00000021088	-	80	33.712

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028046	-	99	53.636	ENSAPOG00000022403	-	99	55.573	Acanthochromis_polyacanthus
ENSLBEG00000028046	-	56	41.274	ENSAPOG00000005058	si:dkey-33c12.4	83	33.798	Acanthochromis_polyacanthus
ENSLBEG00000028046	-	57	40.849	ENSAOCG00000020066	si:dkey-33c12.4	51	40.811	Amphiprion_ocellaris
ENSLBEG00000028046	-	99	55.287	ENSAOCG00000000431	-	99	56.794	Amphiprion_ocellaris
ENSLBEG00000028046	-	99	55.022	ENSAPEG00000023603	-	99	55.994	Amphiprion_percula
ENSLBEG00000028046	-	72	36.327	ENSATEG00000018885	si:dkey-33c12.4	53	41.555	Anabas_testudineus
ENSLBEG00000028046	-	52	37.895	ENSATEG00000001220	zgc:123010	55	37.895	Anabas_testudineus
ENSLBEG00000028046	-	99	52.266	ENSATEG00000018302	-	99	54.788	Anabas_testudineus
ENSLBEG00000028046	-	62	39.430	ENSACLG00000014192	si:dkey-33c12.4	64	38.462	Astatotilapia_calliptera
ENSLBEG00000028046	-	95	51.212	ENSACLG00000003019	-	100	54.516	Astatotilapia_calliptera
ENSLBEG00000028046	-	54	37.838	ENSACLG00000010188	zgc:123010	65	37.838	Astatotilapia_calliptera
ENSLBEG00000028046	-	56	37.089	ENSAMXG00000041967	zgc:123010	66	34.818	Astyanax_mexicanus
ENSLBEG00000028046	-	78	40.812	ENSAMXG00000010871	si:dkey-33c12.4	66	43.261	Astyanax_mexicanus
ENSLBEG00000028046	-	70	31.072	ENSCPBG00000024454	-	67	32.596	Chrysemys_picta_bellii
ENSLBEG00000028046	-	78	49.538	ENSCSEG00000002755	-	90	51.119	Cynoglossus_semilaevis
ENSLBEG00000028046	-	95	49.839	ENSCVAG00000004187	-	100	50.806	Cyprinodon_variegatus
ENSLBEG00000028046	-	56	39.071	ENSCVAG00000006564	-	53	38.814	Cyprinodon_variegatus
ENSLBEG00000028046	-	66	43.056	ENSDARG00000057890	si:dkey-33c12.4	82	39.894	Danio_rerio
ENSLBEG00000028046	-	51	36.145	ENSDARG00000039082	zgc:123010	64	36.145	Danio_rerio
ENSLBEG00000028046	-	50	38.095	ENSELUG00000021447	-	53	38.095	Esox_lucius
ENSLBEG00000028046	-	82	43.345	ENSELUG00000001633	-	82	43.268	Esox_lucius
ENSLBEG00000028046	-	84	37.238	ENSELUG00000002009	si:dkey-33c12.4	98	36.471	Esox_lucius
ENSLBEG00000028046	-	56	39.295	ENSFHEG00000005521	si:dkey-33c12.4	54	39.674	Fundulus_heteroclitus
ENSLBEG00000028046	-	89	51.282	ENSFHEG00000009983	-	96	51.618	Fundulus_heteroclitus
ENSLBEG00000028046	-	59	30.990	ENSGALG00000036747	TTC31	65	30.990	Gallus_gallus
ENSLBEG00000028046	-	99	52.851	ENSGAFG00000016594	-	99	53.929	Gambusia_affinis
ENSLBEG00000028046	-	56	38.298	ENSGAFG00000017596	si:dkey-33c12.4	54	38.522	Gambusia_affinis
ENSLBEG00000028046	-	56	37.396	ENSGACG00000004936	-	90	37.396	Gasterosteus_aculeatus
ENSLBEG00000028046	-	62	39.524	ENSHBUG00000010735	si:dkey-33c12.4	61	39.192	Haplochromis_burtoni
ENSLBEG00000028046	-	88	38.937	ENSIPUG00000005998	si:dkey-33c12.4	85	39.966	Ictalurus_punctatus
ENSLBEG00000028046	-	97	50.946	ENSKMAG00000006468	-	99	54.016	Kryptolebias_marmoratus
ENSLBEG00000028046	-	56	38.667	ENSKMAG00000016610	si:dkey-33c12.4	54	39.678	Kryptolebias_marmoratus
ENSLBEG00000028046	-	51	34.135	ENSLACG00000009001	zgc:123010	72	34.135	Latimeria_chalumnae
ENSLBEG00000028046	-	83	32.799	ENSLACG00000004602	-	91	34.229	Latimeria_chalumnae
ENSLBEG00000028046	-	69	44.124	ENSLOCG00000001861	-	64	44.371	Lepisosteus_oculatus
ENSLBEG00000028046	-	80	54.667	ENSMAMG00000004311	-	85	55.048	Mastacembelus_armatus
ENSLBEG00000028046	-	56	42.005	ENSMAMG00000000111	si:dkey-33c12.4	54	41.892	Mastacembelus_armatus
ENSLBEG00000028046	-	54	37.838	ENSMZEG00005027733	zgc:123010	65	37.838	Maylandia_zebra
ENSLBEG00000028046	-	62	39.430	ENSMZEG00005014276	si:dkey-33c12.4	61	39.100	Maylandia_zebra
ENSLBEG00000028046	-	95	52.504	ENSMZEG00005000585	-	100	54.839	Maylandia_zebra
ENSLBEG00000028046	-	53	37.000	ENSMALG00000017698	zgc:123010	56	37.000	Monopterus_albus
ENSLBEG00000028046	-	56	42.473	ENSMALG00000002265	si:dkey-33c12.4	71	37.792	Monopterus_albus
ENSLBEG00000028046	-	99	55.387	ENSMALG00000003167	-	99	55.267	Monopterus_albus
ENSLBEG00000028046	-	95	52.791	ENSONIG00000007538	-	97	55.385	Oreochromis_niloticus
ENSLBEG00000028046	-	99	48.154	ENSORLG00000030385	-	99	49.002	Oryzias_latipes
ENSLBEG00000028046	-	58	36.267	ENSORLG00000029651	si:dkey-33c12.4	64	34.895	Oryzias_latipes
ENSLBEG00000028046	-	66	35.129	ENSORLG00020008750	si:dkey-33c12.4	60	35.129	Oryzias_latipes_hni
ENSLBEG00000028046	-	99	48.068	ENSORLG00015008400	-	99	49.150	Oryzias_latipes_hsok
ENSLBEG00000028046	-	99	50.229	ENSOMEG00000009428	-	99	50.460	Oryzias_melastigma
ENSLBEG00000028046	-	61	37.500	ENSOMEG00000003408	zgc:123010	50	38.579	Oryzias_melastigma
ENSLBEG00000028046	-	84	41.894	ENSPKIG00000011819	-	78	41.756	Paramormyrops_kingsleyae
ENSLBEG00000028046	-	56	38.692	ENSPFOG00000009143	si:dkey-33c12.4	53	38.587	Poecilia_formosa
ENSLBEG00000028046	-	74	60.649	ENSPFOG00000017092	-	99	60.852	Poecilia_formosa
ENSLBEG00000028046	-	56	38.965	ENSPLAG00000022537	si:dkey-33c12.4	55	38.859	Poecilia_latipinna
ENSLBEG00000028046	-	56	38.692	ENSPMEG00000015590	si:dkey-33c12.4	53	38.587	Poecilia_mexicana
ENSLBEG00000028046	-	98	52.656	ENSPMEG00000009905	-	99	54.743	Poecilia_mexicana
ENSLBEG00000028046	-	98	52.262	ENSPREG00000016861	-	99	55.360	Poecilia_reticulata
ENSLBEG00000028046	-	54	37.838	ENSPNYG00000007893	zgc:123010	65	37.838	Pundamilia_nyererei
ENSLBEG00000028046	-	62	39.430	ENSPNYG00000018262	si:dkey-33c12.4	61	39.100	Pundamilia_nyererei
ENSLBEG00000028046	-	95	52.181	ENSPNYG00000001047	-	100	54.267	Pundamilia_nyererei
ENSLBEG00000028046	-	66	44.056	ENSPNAG00000018386	si:dkey-33c12.4	67	44.156	Pygocentrus_nattereri
ENSLBEG00000028046	-	60	35.537	ENSPNAG00000007579	zgc:123010	67	35.537	Pygocentrus_nattereri
ENSLBEG00000028046	-	78	39.695	ENSSFOG00015009199	-	70	41.649	Scleropages_formosus
ENSLBEG00000028046	-	58	30.214	ENSSFOG00015021394	zgc:123010	60	30.214	Scleropages_formosus
ENSLBEG00000028046	-	65	46.905	ENSSFOG00015005186	-	66	46.889	Scleropages_formosus
ENSLBEG00000028046	-	86	32.828	ENSSMAG00000008147	si:dkey-33c12.4	61	38.028	Scophthalmus_maximus
ENSLBEG00000028046	-	51	33.971	ENSSMAG00000021096	-	68	33.971	Scophthalmus_maximus
ENSLBEG00000028046	-	100	51.198	ENSSMAG00000010960	-	100	52.180	Scophthalmus_maximus
ENSLBEG00000028046	-	55	37.500	ENSSMAG00000002904	zgc:123010	68	37.500	Scophthalmus_maximus
ENSLBEG00000028046	-	56	42.318	ENSSDUG00000003213	si:dkey-33c12.4	57	42.204	Seriola_dumerili
ENSLBEG00000028046	-	94	58.682	ENSSDUG00000010976	-	99	60.096	Seriola_dumerili
ENSLBEG00000028046	-	56	41.935	ENSSLDG00000009448	si:dkey-33c12.4	53	42.049	Seriola_lalandi_dorsalis
ENSLBEG00000028046	-	91	58.264	ENSSLDG00000012846	-	99	59.900	Seriola_lalandi_dorsalis
ENSLBEG00000028046	-	99	53.997	ENSSPAG00000004843	-	99	54.932	Stegastes_partitus
ENSLBEG00000028046	-	99	39.437	ENSTRUG00000000057	-	98	40.845	Takifugu_rubripes
ENSLBEG00000028046	-	56	36.512	ENSTRUG00000022374	si:dkey-33c12.4	79	30.993	Takifugu_rubripes
ENSLBEG00000028046	-	56	38.587	ENSXMAG00000018535	si:dkey-33c12.4	54	37.867	Xiphophorus_maculatus