EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000028208 (Gene tree)
Gene ID: 109989026
Gene Symbol: bms1
Alias: bms1l|im:7152071|wu:fb37d08
Full Name: ribosome biogenesis protein BMS1 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 10893 bases
Position: chrFKLU01000006.1:3804043-3814935
Accession: 109989026
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037799	AARP2CN	PF08142.12	1.6e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039361	-	3594	XM_020640630	ENSLBEP00000037799	1197 (aa)	XP_020496286	-

Gene Model

Click here to download ENSLBEG00000028208's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028208's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028208	bms1	97	66.156	ENSG00000165733	BMS1	82	71.071	Homo_sapiens
ENSLBEG00000028208	bms1	88	80.094	ENSAPOG00000002296	bms1	100	80.412	Acanthochromis_polyacanthus
ENSLBEG00000028208	bms1	99	60.463	ENSAMEG00000016834	BMS1	87	67.416	Ailuropoda_melanoleuca
ENSLBEG00000028208	bms1	100	73.844	ENSACIG00000002588	bms1	100	73.291	Amphilophus_citrinellus
ENSLBEG00000028208	bms1	100	78.887	ENSAOCG00000018088	bms1	100	79.739	Amphiprion_ocellaris
ENSLBEG00000028208	bms1	100	79.180	ENSAPEG00000014673	bms1	100	79.705	Amphiprion_percula
ENSLBEG00000028208	bms1	100	79.610	ENSATEG00000023465	bms1	100	79.041	Anabas_testudineus
ENSLBEG00000028208	bms1	95	61.477	ENSAPLG00000003759	BMS1	87	70.403	Anas_platyrhynchos
ENSLBEG00000028208	bms1	99	63.703	ENSACAG00000004537	-	81	70.208	Anolis_carolinensis
ENSLBEG00000028208	bms1	95	67.357	ENSANAG00000023432	BMS1	81	71.101	Aotus_nancymaae
ENSLBEG00000028208	bms1	100	78.383	ENSACLG00000001294	bms1	100	77.659	Astatotilapia_calliptera
ENSLBEG00000028208	bms1	99	60.385	ENSBTAG00000012878	BMS1	81	72.248	Bos_taurus
ENSLBEG00000028208	bms1	85	51.759	WBGene00022021	Y61A9LA.10	93	51.759	Caenorhabditis_elegans
ENSLBEG00000028208	bms1	97	66.667	ENSCJAG00000021705	BMS1	81	70.843	Callithrix_jacchus
ENSLBEG00000028208	bms1	97	66.260	ENSCAFG00000007114	BMS1	82	71.560	Canis_familiaris
ENSLBEG00000028208	bms1	97	66.260	ENSCAFG00020025282	BMS1	82	71.560	Canis_lupus_dingo
ENSLBEG00000028208	bms1	99	60.277	ENSCHIG00000023251	BMS1	81	72.018	Capra_hircus
ENSLBEG00000028208	bms1	99	57.132	ENSCAPG00000008652	BMS1	82	70.455	Cavia_aperea
ENSLBEG00000028208	bms1	99	60.429	ENSCPOG00000000502	BMS1	90	66.032	Cavia_porcellus
ENSLBEG00000028208	bms1	98	58.359	ENSCCAG00000024969	-	78	58.909	Cebus_capucinus
ENSLBEG00000028208	bms1	82	54.684	ENSCATG00000008695	-	70	56.954	Cercocebus_atys
ENSLBEG00000028208	bms1	97	66.261	ENSCATG00000030625	-	81	70.938	Cercocebus_atys
ENSLBEG00000028208	bms1	99	60.555	ENSCLAG00000002446	BMS1	82	71.136	Chinchilla_lanigera
ENSLBEG00000028208	bms1	97	66.413	ENSCSAG00000011118	BMS1	81	71.071	Chlorocebus_sabaeus
ENSLBEG00000028208	bms1	99	59.815	ENSCHOG00000011055	BMS1	81	70.159	Choloepus_hoffmanni
ENSLBEG00000028208	bms1	98	60.061	ENSCPBG00000025581	BMS1	86	68.269	Chrysemys_picta_bellii
ENSLBEG00000028208	bms1	84	58.495	ENSCING00000003181	-	96	58.495	Ciona_intestinalis
ENSLBEG00000028208	bms1	73	53.968	ENSCSAVG00000004113	-	88	55.275	Ciona_savignyi
ENSLBEG00000028208	bms1	97	67.021	ENSCANG00000011609	BMS1	82	70.843	Colobus_angolensis_palliatus
ENSLBEG00000028208	bms1	98	61.042	ENSCGRG00001019461	Bms1	82	71.526	Cricetulus_griseus_chok1gshd
ENSLBEG00000028208	bms1	98	61.042	ENSCGRG00000009016	Bms1	82	71.526	Cricetulus_griseus_crigri
ENSLBEG00000028208	bms1	100	75.159	ENSCSEG00000002469	bms1	100	73.646	Cynoglossus_semilaevis
ENSLBEG00000028208	bms1	100	77.979	ENSCVAG00000008371	bms1	100	77.896	Cyprinodon_variegatus
ENSLBEG00000028208	bms1	99	69.611	ENSDARG00000054154	bms1	90	72.016	Danio_rerio
ENSLBEG00000028208	bms1	54	66.199	ENSDNOG00000015761	BMS1	81	71.071	Dasypus_novemcinctus
ENSLBEG00000028208	bms1	95	67.402	ENSDORG00000002982	Bms1	82	71.298	Dipodomys_ordii
ENSLBEG00000028208	bms1	95	53.151	FBgn0036686	CG7728	91	57.561	Drosophila_melanogaster
ENSLBEG00000028208	bms1	84	63.393	ENSETEG00000009554	BMS1	72	69.108	Echinops_telfairi
ENSLBEG00000028208	bms1	99	59.679	ENSEASG00005006894	BMS1	82	70.387	Equus_asinus_asinus
ENSLBEG00000028208	bms1	99	60.417	ENSECAG00000001358	BMS1	82	70.387	Equus_caballus
ENSLBEG00000028208	bms1	99	73.242	ENSELUG00000001756	bms1	76	84.511	Esox_lucius
ENSLBEG00000028208	bms1	99	60.676	ENSFCAG00000011220	BMS1	87	66.346	Felis_catus
ENSLBEG00000028208	bms1	99	59.668	ENSFALG00000006882	BMS1	80	71.494	Ficedula_albicollis
ENSLBEG00000028208	bms1	99	60.401	ENSFDAG00000001422	BMS1	82	70.387	Fukomys_damarensis
ENSLBEG00000028208	bms1	100	77.329	ENSFHEG00000003367	bms1	100	77.018	Fundulus_heteroclitus
ENSLBEG00000028208	bms1	99	69.551	ENSGMOG00000000718	bms1	53	75.199	Gadus_morhua
ENSLBEG00000028208	bms1	99	60.476	ENSGALG00000002624	BMS1	81	71.789	Gallus_gallus
ENSLBEG00000028208	bms1	100	81.775	ENSGACG00000015334	bms1	89	80.159	Gasterosteus_aculeatus
ENSLBEG00000028208	bms1	98	64.774	ENSGAGG00000003467	BMS1	83	71.954	Gopherus_agassizii
ENSLBEG00000028208	bms1	100	78.043	ENSHBUG00000022628	bms1	100	77.576	Haplochromis_burtoni
ENSLBEG00000028208	bms1	99	60.449	ENSHGLG00000000477	BMS1	82	70.615	Heterocephalus_glaber_female
ENSLBEG00000028208	bms1	99	60.325	ENSHGLG00100002176	BMS1	82	70.615	Heterocephalus_glaber_male
ENSLBEG00000028208	bms1	99	76.631	ENSHCOG00000017604	bms1	99	75.705	Hippocampus_comes
ENSLBEG00000028208	bms1	99	69.298	ENSIPUG00000017855	bms1	84	79.167	Ictalurus_punctatus
ENSLBEG00000028208	bms1	98	65.134	ENSSTOG00000015063	BMS1	81	72.082	Ictidomys_tridecemlineatus
ENSLBEG00000028208	bms1	99	60.370	ENSJJAG00000017328	Bms1	82	71.298	Jaculus_jaculus
ENSLBEG00000028208	bms1	65	70.923	ENSKMAG00000021982	bms1	97	70.000	Kryptolebias_marmoratus
ENSLBEG00000028208	bms1	99	57.915	ENSLACG00000001600	BMS1	88	64.660	Latimeria_chalumnae
ENSLBEG00000028208	bms1	98	71.299	ENSLOCG00000012914	bms1	99	70.736	Lepisosteus_oculatus
ENSLBEG00000028208	bms1	99	64.795	ENSLAFG00000006250	BMS1	81	70.252	Loxodonta_africana
ENSLBEG00000028208	bms1	87	64.896	ENSMFAG00000037771	BMS1	89	71.071	Macaca_fascicularis
ENSLBEG00000028208	bms1	87	60.734	ENSMMUG00000007426	-	78	62.795	Macaca_mulatta
ENSLBEG00000028208	bms1	81	54.076	ENSMLEG00000029084	-	70	59.375	Mandrillus_leucophaeus
ENSLBEG00000028208	bms1	100	77.340	ENSMAMG00000020855	bms1	100	76.993	Mastacembelus_armatus
ENSLBEG00000028208	bms1	100	78.383	ENSMZEG00005005663	bms1	100	77.659	Maylandia_zebra
ENSLBEG00000028208	bms1	95	60.543	ENSMGAG00000001170	BMS1	81	71.466	Meleagris_gallopavo
ENSLBEG00000028208	bms1	98	61.401	ENSMAUG00000002195	Bms1	82	71.526	Mesocricetus_auratus
ENSLBEG00000028208	bms1	98	65.620	ENSMICG00000009977	BMS1	81	70.387	Microcebus_murinus
ENSLBEG00000028208	bms1	98	64.941	ENSMOCG00000002038	Bms1	82	71.526	Microtus_ochrogaster
ENSLBEG00000028208	bms1	100	76.403	ENSMMOG00000000977	bms1	100	76.073	Mola_mola
ENSLBEG00000028208	bms1	99	61.009	ENSMODG00000001177	BMS1	81	72.018	Monodelphis_domestica
ENSLBEG00000028208	bms1	100	80.016	ENSMALG00000009680	bms1	100	79.342	Monopterus_albus
ENSLBEG00000028208	bms1	79	77.966	MGP_CAROLIEiJ_G0028785	-	75	78.298	Mus_caroli
ENSLBEG00000028208	bms1	98	60.124	ENSMUSG00000030138	Bms1	82	71.071	Mus_musculus
ENSLBEG00000028208	bms1	98	63.557	MGP_PahariEiJ_G0022539	Bms1	88	66.561	Mus_pahari
ENSLBEG00000028208	bms1	98	59.892	MGP_SPRETEiJ_G0029816	Bms1	82	70.843	Mus_spretus
ENSLBEG00000028208	bms1	97	66.514	ENSMPUG00000017276	BMS1	82	70.938	Mustela_putorius_furo
ENSLBEG00000028208	bms1	99	60.077	ENSMLUG00000003260	BMS1	82	70.522	Myotis_lucifugus
ENSLBEG00000028208	bms1	99	55.929	ENSNGAG00000015258	Bms1	84	67.143	Nannospalax_galili
ENSLBEG00000028208	bms1	97	64.634	ENSNLEG00000015791	BMS1	81	70.843	Nomascus_leucogenys
ENSLBEG00000028208	bms1	85	74.083	ENSOPRG00000005195	BMS1	80	73.902	Ochotona_princeps
ENSLBEG00000028208	bms1	99	60.108	ENSODEG00000005554	BMS1	82	71.526	Octodon_degus
ENSLBEG00000028208	bms1	100	79.125	ENSONIG00000007227	bms1	100	77.878	Oreochromis_niloticus
ENSLBEG00000028208	bms1	56	64.382	ENSOANG00000000662	-	81	71.101	Ornithorhynchus_anatinus
ENSLBEG00000028208	bms1	95	67.886	ENSOCUG00000005354	BMS1	81	71.560	Oryctolagus_cuniculus
ENSLBEG00000028208	bms1	99	78.311	ENSORLG00000014655	bms1	99	78.146	Oryzias_latipes
ENSLBEG00000028208	bms1	99	74.940	ENSORLG00020016246	bms1	81	77.282	Oryzias_latipes_hni
ENSLBEG00000028208	bms1	99	75.851	ENSORLG00015014183	bms1	92	75.919	Oryzias_latipes_hsok
ENSLBEG00000028208	bms1	99	77.860	ENSOMEG00000015042	bms1	99	77.860	Oryzias_melastigma
ENSLBEG00000028208	bms1	99	60.091	ENSOGAG00000006511	BMS1	81	70.295	Otolemur_garnettii
ENSLBEG00000028208	bms1	99	60.169	ENSOARG00000003900	BMS1	81	71.364	Ovis_aries
ENSLBEG00000028208	bms1	97	63.619	ENSPPAG00000027837	BMS1	81	70.843	Pan_paniscus
ENSLBEG00000028208	bms1	99	60.413	ENSPPRG00000001311	BMS1	81	70.938	Panthera_pardus
ENSLBEG00000028208	bms1	99	59.447	ENSPTIG00000009652	BMS1	87	64.263	Panthera_tigris_altaica
ENSLBEG00000028208	bms1	97	66.667	ENSPTRG00000002441	BMS1	82	70.843	Pan_troglodytes
ENSLBEG00000028208	bms1	97	75.119	ENSPKIG00000008165	bms1	88	75.879	Paramormyrops_kingsleyae
ENSLBEG00000028208	bms1	97	66.511	ENSPSIG00000006481	BMS1	86	66.934	Pelodiscus_sinensis
ENSLBEG00000028208	bms1	98	55.796	ENSPEMG00000022467	Bms1	81	71.982	Peromyscus_maniculatus_bairdii
ENSLBEG00000028208	bms1	95	66.773	ENSPCIG00000001339	BMS1	80	71.330	Phascolarctos_cinereus
ENSLBEG00000028208	bms1	97	79.618	ENSPFOG00000015180	bms1	99	75.967	Poecilia_formosa
ENSLBEG00000028208	bms1	99	76.214	ENSPMEG00000023176	bms1	94	76.359	Poecilia_mexicana
ENSLBEG00000028208	bms1	99	75.371	ENSPREG00000002695	bms1	99	75.783	Poecilia_reticulata
ENSLBEG00000028208	bms1	54	64.259	ENSPPYG00000002836	-	70	70.843	Pongo_abelii
ENSLBEG00000028208	bms1	73	72.297	ENSPCAG00000014528	BMS1	66	72.297	Procavia_capensis
ENSLBEG00000028208	bms1	94	62.815	ENSPCOG00000023834	-	79	71.391	Propithecus_coquereli
ENSLBEG00000028208	bms1	99	60.000	ENSPVAG00000000725	BMS1	82	70.615	Pteropus_vampyrus
ENSLBEG00000028208	bms1	100	75.890	ENSPNYG00000018866	bms1	100	74.029	Pundamilia_nyererei
ENSLBEG00000028208	bms1	96	75.625	ENSPNAG00000000676	bms1	89	76.555	Pygocentrus_nattereri
ENSLBEG00000028208	bms1	80	60.188	ENSRNOG00000006576	Bms1	78	71.330	Rattus_norvegicus
ENSLBEG00000028208	bms1	97	66.565	ENSRROG00000040101	BMS1	81	66.984	Rhinopithecus_roxellana
ENSLBEG00000028208	bms1	84	43.137	YPL217C	-	85	45.395	Saccharomyces_cerevisiae
ENSLBEG00000028208	bms1	88	70.548	ENSSBOG00000035778	BMS1	81	70.387	Saimiri_boliviensis_boliviensis
ENSLBEG00000028208	bms1	99	64.392	ENSSHAG00000005062	BMS1	80	72.018	Sarcophilus_harrisii
ENSLBEG00000028208	bms1	55	75.228	ENSSFOG00015022313	bms1	93	75.791	Scleropages_formosus
ENSLBEG00000028208	bms1	100	78.698	ENSSMAG00000019966	bms1	100	78.457	Scophthalmus_maximus
ENSLBEG00000028208	bms1	100	78.935	ENSSDUG00000016875	bms1	100	78.208	Seriola_dumerili
ENSLBEG00000028208	bms1	100	78.956	ENSSLDG00000015199	bms1	100	78.072	Seriola_lalandi_dorsalis
ENSLBEG00000028208	bms1	69	49.836	ENSSARG00000014407	BMS1	66	74.000	Sorex_araneus
ENSLBEG00000028208	bms1	98	68.404	ENSSPUG00000014454	BMS1	81	72.120	Sphenodon_punctatus
ENSLBEG00000028208	bms1	97	66.463	ENSSSCG00000010198	BMS1	82	71.625	Sus_scrofa
ENSLBEG00000028208	bms1	94	67.572	ENSTGUG00000006302	-	80	71.724	Taeniopygia_guttata
ENSLBEG00000028208	bms1	99	74.286	ENSTNIG00000006216	bms1	83	80.365	Tetraodon_nigroviridis
ENSLBEG00000028208	bms1	64	69.079	ENSTBEG00000001673	-	62	68.350	Tupaia_belangeri
ENSLBEG00000028208	bms1	99	59.861	ENSTTRG00000007983	BMS1	80	74.390	Tursiops_truncatus
ENSLBEG00000028208	bms1	99	60.944	ENSUAMG00000023996	BMS1	87	66.774	Ursus_americanus
ENSLBEG00000028208	bms1	99	60.789	ENSUMAG00000016523	BMS1	87	66.453	Ursus_maritimus
ENSLBEG00000028208	bms1	71	72.973	ENSVPAG00000007477	BMS1	72	72.973	Vicugna_pacos
ENSLBEG00000028208	bms1	97	65.954	ENSVVUG00000021305	BMS1	84	71.560	Vulpes_vulpes
ENSLBEG00000028208	bms1	98	61.124	ENSXETG00000008158	bms1	89	62.913	Xenopus_tropicalis
ENSLBEG00000028208	bms1	99	74.313	ENSXCOG00000000506	bms1	96	84.521	Xiphophorus_couchianus
ENSLBEG00000028208	bms1	99	74.794	ENSXMAG00000014236	bms1	99	76.053	Xiphophorus_maculatus