EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000028310 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 12449 bases
Position: chrFKLU01000811.1:36172-48620
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000037960	Fox-1_C	PF12414.8	3.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039524	-	813	-	ENSLBEP00000037960	270 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000028310's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028310's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000028310	-	62	56.459	ENSLBEG00000026187	rbfox2	86	57.282
ENSLBEG00000028310	-	56	47.753	ENSLBEG00000014659	rbfox1	50	46.117

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028310	-	84	42.373	ENSG00000100320	RBFOX2	98	46.862	Homo_sapiens
ENSLBEG00000028310	-	69	58.009	ENSAPOG00000021561	-	52	58.874	Acanthochromis_polyacanthus
ENSLBEG00000028310	-	57	50.952	ENSAMEG00000007228	RBFOX2	77	46.694	Ailuropoda_melanoleuca
ENSLBEG00000028310	-	56	55.114	ENSACIG00000001690	rbfox2	61	56.647	Amphilophus_citrinellus
ENSLBEG00000028310	-	69	58.009	ENSAOCG00000015358	-	53	58.874	Amphiprion_ocellaris
ENSLBEG00000028310	-	69	59.389	ENSATEG00000009959	-	52	59.389	Anabas_testudineus
ENSLBEG00000028310	-	82	41.290	ENSAPLG00000007609	RBFOX2	60	47.059	Anas_platyrhynchos
ENSLBEG00000028310	-	82	41.290	ENSACAG00000016535	RBFOX2	50	47.059	Anolis_carolinensis
ENSLBEG00000028310	-	80	41.311	ENSANAG00000015245	RBFOX2	75	47.059	Aotus_nancymaae
ENSLBEG00000028310	-	69	57.576	ENSACLG00000017380	-	52	57.143	Astatotilapia_calliptera
ENSLBEG00000028310	-	57	57.286	ENSAMXG00000011451	rbfox2	50	56.281	Astyanax_mexicanus
ENSLBEG00000028310	-	82	41.270	ENSBTAG00000020125	RBFOX2	61	46.502	Bos_taurus
ENSLBEG00000028310	-	84	42.373	ENSCJAG00000019456	-	97	36.170	Callithrix_jacchus
ENSLBEG00000028310	-	69	47.479	ENSCJAG00000038886	-	58	46.639	Callithrix_jacchus
ENSLBEG00000028310	-	69	47.899	ENSCAFG00000001701	RBFOX2	60	47.059	Canis_familiaris
ENSLBEG00000028310	-	69	42.222	ENSCAFG00020004541	RBFOX2	54	38.785	Canis_lupus_dingo
ENSLBEG00000028310	-	66	80.488	ENSCHIG00000014027	RBFOX2	61	46.862	Capra_hircus
ENSLBEG00000028310	-	100	37.265	ENSTSYG00000014123	RBFOX2	78	41.695	Carlito_syrichta
ENSLBEG00000028310	-	53	45.652	ENSCAPG00000014308	RBFOX2	55	40.553	Cavia_aperea
ENSLBEG00000028310	-	69	47.899	ENSCPOG00000022180	RBFOX2	60	46.862	Cavia_porcellus
ENSLBEG00000028310	-	84	42.373	ENSCCAG00000036584	RBFOX2	78	41.554	Cebus_capucinus
ENSLBEG00000028310	-	84	42.373	ENSCATG00000038655	RBFOX2	96	36.119	Cercocebus_atys
ENSLBEG00000028310	-	82	41.479	ENSCLAG00000017106	RBFOX2	60	46.862	Chinchilla_lanigera
ENSLBEG00000028310	-	64	41.304	ENSCHOG00000002887	RBFOX2	51	49.367	Choloepus_hoffmanni
ENSLBEG00000028310	-	82	41.613	ENSCPBG00000023144	RBFOX2	73	38.610	Chrysemys_picta_bellii
ENSLBEG00000028310	-	84	42.373	ENSCANG00000035832	RBFOX2	100	36.216	Colobus_angolensis_palliatus
ENSLBEG00000028310	-	82	41.613	ENSCGRG00001017727	Rbfox2	60	47.059	Cricetulus_griseus_chok1gshd
ENSLBEG00000028310	-	82	41.479	ENSCGRG00000014237	Rbfox2	60	46.862	Cricetulus_griseus_crigri
ENSLBEG00000028310	-	52	53.297	ENSCVAG00000004491	rbfox2	76	53.846	Cyprinodon_variegatus
ENSLBEG00000028310	-	57	51.485	ENSDARG00000052182	rbfox2	79	55.941	Danio_rerio
ENSLBEG00000028310	-	69	47.899	ENSDNOG00000004372	RBFOX2	57	47.059	Dasypus_novemcinctus
ENSLBEG00000028310	-	82	43.000	ENSDORG00000015003	Rbfox2	62	48.498	Dipodomys_ordii
ENSLBEG00000028310	-	51	75.000	ENSEASG00005018920	RBFOX2	50	47.059	Equus_asinus_asinus
ENSLBEG00000028310	-	82	40.968	ENSECAG00000018923	RBFOX2	50	47.059	Equus_caballus
ENSLBEG00000028310	-	64	43.860	ENSEEUG00000004549	RBFOX2	57	42.982	Erinaceus_europaeus
ENSLBEG00000028310	-	57	60.452	ENSELUG00000000102	rbfox2	76	62.712	Esox_lucius
ENSLBEG00000028310	-	84	42.712	ENSFCAG00000010061	RBFOX2	78	41.892	Felis_catus
ENSLBEG00000028310	-	82	41.290	ENSFALG00000013111	RBFOX2	59	47.059	Ficedula_albicollis
ENSLBEG00000028310	-	57	47.525	ENSGMOG00000005278	rbfox2	53	47.525	Gadus_morhua
ENSLBEG00000028310	-	52	53.297	ENSGAFG00000008448	rbfox2	77	53.846	Gambusia_affinis
ENSLBEG00000028310	-	57	53.555	ENSGACG00000015968	rbfox2	54	54.028	Gasterosteus_aculeatus
ENSLBEG00000028310	-	62	51.389	ENSGACG00000007174	-	55	52.582	Gasterosteus_aculeatus
ENSLBEG00000028310	-	82	41.613	ENSGAGG00000025884	RBFOX2	72	41.912	Gopherus_agassizii
ENSLBEG00000028310	-	84	42.373	ENSGGOG00000037332	RBFOX2	78	41.695	Gorilla_gorilla
ENSLBEG00000028310	-	69	47.899	ENSHGLG00000012907	RBFOX2	61	47.059	Heterocephalus_glaber_female
ENSLBEG00000028310	-	69	47.699	ENSHGLG00100009986	RBFOX2	60	46.862	Heterocephalus_glaber_male
ENSLBEG00000028310	-	69	49.351	ENSIPUG00000016896	rbfox2	58	49.351	Ictalurus_punctatus
ENSLBEG00000028310	-	82	41.479	ENSSTOG00000014841	RBFOX2	60	46.862	Ictidomys_tridecemlineatus
ENSLBEG00000028310	-	82	41.883	ENSJJAG00000014885	Rbfox2	59	47.458	Jaculus_jaculus
ENSLBEG00000028310	-	69	57.576	ENSKMAG00000013354	-	65	62.759	Kryptolebias_marmoratus
ENSLBEG00000028310	-	62	44.643	ENSLACG00000003339	RBFOX2	55	43.891	Latimeria_chalumnae
ENSLBEG00000028310	-	82	42.038	ENSLAFG00000027140	RBFOX2	62	47.107	Loxodonta_africana
ENSLBEG00000028310	-	84	42.373	ENSMFAG00000031994	RBFOX2	89	36.216	Macaca_fascicularis
ENSLBEG00000028310	-	84	42.373	ENSMMUG00000014010	RBFOX2	100	36.216	Macaca_mulatta
ENSLBEG00000028310	-	84	42.373	ENSMNEG00000034388	RBFOX2	90	36.000	Macaca_nemestrina
ENSLBEG00000028310	-	84	42.373	ENSMLEG00000005854	RBFOX2	93	36.096	Mandrillus_leucophaeus
ENSLBEG00000028310	-	57	57.653	ENSMAMG00000004293	rbfox2	54	58.586	Mastacembelus_armatus
ENSLBEG00000028310	-	69	57.143	ENSMZEG00005004959	-	52	57.143	Maylandia_zebra
ENSLBEG00000028310	-	57	53.646	ENSMGAG00000012724	RBFOX2	100	53.646	Meleagris_gallopavo
ENSLBEG00000028310	-	82	41.479	ENSMAUG00000018816	Rbfox2	60	46.862	Mesocricetus_auratus
ENSLBEG00000028310	-	84	42.373	ENSMICG00000035417	RBFOX2	78	41.695	Microcebus_murinus
ENSLBEG00000028310	-	82	41.479	ENSMOCG00000009327	Rbfox2	60	46.862	Microtus_ochrogaster
ENSLBEG00000028310	-	57	56.886	ENSMMOG00000008287	rbfox2	75	57.485	Mola_mola
ENSLBEG00000028310	-	69	45.276	ENSMODG00000001122	RBFOX2	63	44.488	Monodelphis_domestica
ENSLBEG00000028310	-	57	58.081	ENSMALG00000000623	rbfox2	78	58.586	Monopterus_albus
ENSLBEG00000028310	-	82	41.613	MGP_CAROLIEiJ_G0019957	Rbfox2	60	47.059	Mus_caroli
ENSLBEG00000028310	-	85	44.912	ENSMUSG00000033565	Rbfox2	78	44.561	Mus_musculus
ENSLBEG00000028310	-	82	41.613	MGP_PahariEiJ_G0019967	Rbfox2	60	47.059	Mus_pahari
ENSLBEG00000028310	-	82	41.613	MGP_SPRETEiJ_G0020860	Rbfox2	60	47.059	Mus_spretus
ENSLBEG00000028310	-	82	41.401	ENSMPUG00000012555	RBFOX2	57	46.694	Mustela_putorius_furo
ENSLBEG00000028310	-	82	41.956	ENSMLUG00000002676	RBFOX2	58	46.531	Myotis_lucifugus
ENSLBEG00000028310	-	57	52.174	ENSNGAG00000020528	Rbfox2	60	46.862	Nannospalax_galili
ENSLBEG00000028310	-	84	42.373	ENSNLEG00000034979	RBFOX2	100	35.904	Nomascus_leucogenys
ENSLBEG00000028310	-	69	47.521	ENSMEUG00000001547	RBFOX2	62	46.694	Notamacropus_eugenii
ENSLBEG00000028310	-	69	47.699	ENSODEG00000009937	RBFOX2	60	46.862	Octodon_degus
ENSLBEG00000028310	-	57	60.190	ENSONIG00000008341	-	59	55.144	Oreochromis_niloticus
ENSLBEG00000028310	-	57	52.113	ENSONIG00000017998	rbfox2	52	53.052	Oreochromis_niloticus
ENSLBEG00000028310	-	84	42.949	ENSOCUG00000001349	RBFOX2	54	50.661	Oryctolagus_cuniculus
ENSLBEG00000028310	-	57	57.360	ENSORLG00000028082	rbfox2	54	54.245	Oryzias_latipes
ENSLBEG00000028310	-	57	57.360	ENSORLG00020008976	rbfox2	54	54.245	Oryzias_latipes_hni
ENSLBEG00000028310	-	57	57.360	ENSORLG00015007027	rbfox2	54	54.245	Oryzias_latipes_hsok
ENSLBEG00000028310	-	69	47.521	ENSOGAG00000033250	RBFOX2	61	46.694	Otolemur_garnettii
ENSLBEG00000028310	-	57	53.365	ENSOARG00000018669	RBFOX2	60	48.750	Ovis_aries
ENSLBEG00000028310	-	84	42.373	ENSPPAG00000035653	RBFOX2	90	36.096	Pan_paniscus
ENSLBEG00000028310	-	84	42.712	ENSPPRG00000015635	RBFOX2	78	41.892	Panthera_pardus
ENSLBEG00000028310	-	84	42.712	ENSPTIG00000019147	RBFOX2	78	41.892	Panthera_tigris_altaica
ENSLBEG00000028310	-	84	42.373	ENSPTRG00000014305	RBFOX2	78	41.695	Pan_troglodytes
ENSLBEG00000028310	-	84	42.373	ENSPANG00000007030	RBFOX2	95	36.000	Papio_anubis
ENSLBEG00000028310	-	57	49.246	ENSPKIG00000010816	-	51	50.251	Paramormyrops_kingsleyae
ENSLBEG00000028310	-	69	47.899	ENSPSIG00000017828	RBFOX2	60	47.059	Pelodiscus_sinensis
ENSLBEG00000028310	-	57	57.592	ENSPMGG00000007138	rbfox2	77	57.592	Periophthalmus_magnuspinnatus
ENSLBEG00000028310	-	82	41.479	ENSPEMG00000012542	Rbfox2	60	46.862	Peromyscus_maniculatus_bairdii
ENSLBEG00000028310	-	82	41.214	ENSPCIG00000021550	RBFOX2	63	46.473	Phascolarctos_cinereus
ENSLBEG00000028310	-	69	55.172	ENSPFOG00000001869	-	81	50.000	Poecilia_formosa
ENSLBEG00000028310	-	57	61.500	ENSPLAG00000002710	-	91	56.466	Poecilia_latipinna
ENSLBEG00000028310	-	57	55.897	ENSPLAG00000017308	rbfox2	77	55.897	Poecilia_latipinna
ENSLBEG00000028310	-	57	61.194	ENSPMEG00000013663	-	91	56.223	Poecilia_mexicana
ENSLBEG00000028310	-	57	56.061	ENSPMEG00000007320	rbfox2	78	56.566	Poecilia_mexicana
ENSLBEG00000028310	-	57	54.315	ENSPREG00000012955	rbfox2	78	54.822	Poecilia_reticulata
ENSLBEG00000028310	-	82	40.764	ENSPPYG00000011766	RBFOX2	80	36.096	Pongo_abelii
ENSLBEG00000028310	-	57	50.952	ENSPVAG00000015844	RBFOX2	62	46.694	Pteropus_vampyrus
ENSLBEG00000028310	-	69	56.466	ENSPNYG00000020595	-	53	56.897	Pundamilia_nyererei
ENSLBEG00000028310	-	82	41.479	ENSRNOG00000004688	Rbfox2	57	46.862	Rattus_norvegicus
ENSLBEG00000028310	-	84	42.373	ENSRBIG00000033696	RBFOX2	95	36.119	Rhinopithecus_bieti
ENSLBEG00000028310	-	84	42.373	ENSRROG00000035715	RBFOX2	100	36.000	Rhinopithecus_roxellana
ENSLBEG00000028310	-	84	42.373	ENSSBOG00000028291	RBFOX2	78	41.554	Saimiri_boliviensis_boliviensis
ENSLBEG00000028310	-	82	41.214	ENSSHAG00000006835	RBFOX2	58	46.473	Sarcophilus_harrisii
ENSLBEG00000028310	-	57	61.538	ENSSFOG00015010482	-	50	63.077	Scleropages_formosus
ENSLBEG00000028310	-	84	44.599	ENSSSCG00000000152	RBFOX2	78	44.251	Sus_scrofa
ENSLBEG00000028310	-	82	41.290	ENSTGUG00000010808	RBFOX2	61	47.059	Taeniopygia_guttata
ENSLBEG00000028310	-	57	60.106	ENSTRUG00000007739	-	73	47.170	Takifugu_rubripes
ENSLBEG00000028310	-	84	41.587	ENSTTRG00000006922	RBFOX2	62	46.694	Tursiops_truncatus
ENSLBEG00000028310	-	78	38.944	ENSUAMG00000010612	RBFOX2	57	43.723	Ursus_americanus
ENSLBEG00000028310	-	82	38.339	ENSVPAG00000002824	RBFOX2	62	42.739	Vicugna_pacos
ENSLBEG00000028310	-	84	44.876	ENSVVUG00000023561	RBFOX2	73	43.617	Vulpes_vulpes
ENSLBEG00000028310	-	81	41.584	ENSXETG00000000231	rbfox2	54	52.404	Xenopus_tropicalis
ENSLBEG00000028310	-	62	56.633	ENSXCOG00000013643	rbfox2	83	59.890	Xiphophorus_couchianus