EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000028426 (Gene tree)
Gene ID: 110002105
Gene Symbol: RAB1A
Alias: RAB1|YPT1
Full Name: ras-related protein ORAB-1
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8024 bases
Position: chrFKLU01000905.1:29897-37920
Accession: 110002105
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038138	MMR_HSR1	PF01926.23	2.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039705	RAB1A-202	1554	-	ENSLBEP00000038140	158 (aa)	-	-
ENSLBET00000039702	RAB1A-201	2498	XM_020657753	ENSLBEP00000038138	202 (aa)	XP_020513409	UPI0009B4D905

Gene Model

Click here to download ENSLBEG00000028426's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028426's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000028426	RAB1A	71	31.034	ENSLBEG00000017331	-	76	31.034
ENSLBEG00000028426	RAB1A	86	30.208	ENSLBEG00000016218	rasl11a	73	30.208
ENSLBEG00000028426	RAB1A	99	44.231	ENSLBEG00000005981	-	96	44.231
ENSLBEG00000028426	RAB1A	58	32.500	ENSLBEG00000013638	arl4aa	64	32.500
ENSLBEG00000028426	RAB1A	81	34.146	ENSLBEG00000003132	rras	81	34.146
ENSLBEG00000028426	RAB1A	96	38.265	ENSLBEG00000026930	rab6ba	93	38.265
ENSLBEG00000028426	RAB1A	85	33.898	ENSLBEG00000014885	rheb	95	33.898
ENSLBEG00000028426	RAB1A	82	51.205	ENSLBEG00000001146	rab30	82	51.205
ENSLBEG00000028426	RAB1A	77	41.509	ENSLBEG00000005128	-	71	41.509
ENSLBEG00000028426	RAB1A	89	41.530	ENSLBEG00000002926	si:dkey-34d22.5	81	41.530
ENSLBEG00000028426	RAB1A	79	30.303	ENSLBEG00000028391	dnajc27	60	30.303
ENSLBEG00000028426	RAB1A	69	30.496	ENSLBEG00000025929	arl3	75	30.496
ENSLBEG00000028426	RAB1A	59	32.500	ENSLBEG00000022310	arl8ba	53	32.500
ENSLBEG00000028426	RAB1A	95	32.990	ENSLBEG00000003644	rabl2	85	32.990
ENSLBEG00000028426	RAB1A	85	41.040	ENSLBEG00000027539	-	77	41.040
ENSLBEG00000028426	RAB1A	79	39.877	ENSLBEG00000017798	-	79	39.877
ENSLBEG00000028426	RAB1A	98	44.878	ENSLBEG00000016446	rab25b	96	44.878
ENSLBEG00000028426	RAB1A	97	36.098	ENSLBEG00000020582	rab9a	97	36.098
ENSLBEG00000028426	RAB1A	96	44.615	ENSLBEG00000004128	rab5c	89	44.615
ENSLBEG00000028426	RAB1A	75	32.237	ENSLBEG00000000119	rras2	81	32.927
ENSLBEG00000028426	RAB1A	96	46.193	ENSLBEG00000019428	rab18b	95	46.193
ENSLBEG00000028426	RAB1A	58	31.933	ENSLBEG00000012677	arl4cb	61	31.933
ENSLBEG00000028426	RAB1A	84	49.112	ENSLBEG00000013463	rab15	79	49.112
ENSLBEG00000028426	RAB1A	80	66.049	ENSLBEG00000001618	rab35b	80	66.049
ENSLBEG00000028426	RAB1A	79	39.877	ENSLBEG00000001796	RAB7A	79	39.877
ENSLBEG00000028426	RAB1A	84	45.304	ENSLBEG00000025798	zgc:101559	77	45.304
ENSLBEG00000028426	RAB1A	86	35.955	ENSLBEG00000001905	hrasb	93	35.955
ENSLBEG00000028426	RAB1A	81	31.548	ENSLBEG00000027628	si:cabz01085950.1	82	31.548
ENSLBEG00000028426	RAB1A	99	47.573	ENSLBEG00000016417	rab11al	95	47.573
ENSLBEG00000028426	RAB1A	98	32.843	ENSLBEG00000006152	-	99	32.843
ENSLBEG00000028426	RAB1A	99	46.154	ENSLBEG00000004172	-	96	46.154
ENSLBEG00000028426	RAB1A	85	44.944	ENSLBEG00000026777	rab33ba	77	44.944
ENSLBEG00000028426	RAB1A	89	55.801	ENSLBEG00000026779	rab13	91	55.801
ENSLBEG00000028426	RAB1A	98	75.635	ENSLBEG00000005791	-	92	75.635
ENSLBEG00000028426	RAB1A	58	33.613	ENSLBEG00000016494	arl2	61	33.613
ENSLBEG00000028426	RAB1A	99	42.254	ENSLBEG00000003101	rab4a	100	42.254
ENSLBEG00000028426	RAB1A	100	91.584	ENSLBEG00000021040	rab1ba	100	91.584
ENSLBEG00000028426	RAB1A	84	45.614	ENSLBEG00000001313	RAB39B	80	45.614
ENSLBEG00000028426	RAB1A	81	37.576	ENSLBEG00000028450	kras	93	36.158
ENSLBEG00000028426	RAB1A	98	43.284	ENSLBEG00000002367	rab25a	95	43.284
ENSLBEG00000028426	RAB1A	95	75.000	ENSLBEG00000027226	-	82	75.000
ENSLBEG00000028426	RAB1A	96	46.907	ENSLBEG00000020796	rab2a	99	45.455
ENSLBEG00000028426	RAB1A	96	45.641	ENSLBEG00000005861	rab18a	89	45.641
ENSLBEG00000028426	RAB1A	57	31.967	ENSLBEG00000027205	-	63	31.967
ENSLBEG00000028426	RAB1A	96	39.698	ENSLBEG00000003748	rab6a	93	39.698
ENSLBEG00000028426	RAB1A	96	31.156	ENSLBEG00000027691	RAB17	86	31.156
ENSLBEG00000028426	RAB1A	83	52.381	ENSLBEG00000006087	rab11ba	76	53.012
ENSLBEG00000028426	RAB1A	96	43.814	ENSLBEG00000002516	rab5aa	85	43.814
ENSLBEG00000028426	RAB1A	97	44.103	ENSLBEG00000026790	-	90	44.103
ENSLBEG00000028426	RAB1A	80	40.994	ENSLBEG00000019372	rab6bb	77	40.994
ENSLBEG00000028426	RAB1A	98	32.843	ENSLBEG00000018812	RAB29	99	32.843
ENSLBEG00000028426	RAB1A	97	45.641	ENSLBEG00000019435	rab14	90	45.641
ENSLBEG00000028426	RAB1A	84	47.929	ENSLBEG00000026989	RAB15	79	47.929
ENSLBEG00000028426	RAB1A	99	46.890	ENSLBEG00000015248	rab11bb	96	46.890
ENSLBEG00000028426	RAB1A	82	38.953	ENSLBEG00000005018	rab32b	81	38.953
ENSLBEG00000028426	RAB1A	96	37.688	ENSLBEG00000008746	RAB41	91	37.688
ENSLBEG00000028426	RAB1A	78	38.650	ENSLBEG00000026006	rab34a	61	38.650
ENSLBEG00000028426	RAB1A	79	61.875	ENSLBEG00000007681	si:dkey-16l2.16	77	61.111
ENSLBEG00000028426	RAB1A	97	33.846	ENSLBEG00000015149	-	86	33.846
ENSLBEG00000028426	RAB1A	99	49.515	ENSLBEG00000026857	rab11a	96	49.515
ENSLBEG00000028426	RAB1A	83	49.112	ENSLBEG00000013756	rab12	78	45.503
ENSLBEG00000028426	RAB1A	81	45.238	ENSLBEG00000014427	rab33a	75	45.238
ENSLBEG00000028426	RAB1A	58	44.538	ENSLBEG00000027819	rab34b	59	44.538
ENSLBEG00000028426	RAB1A	84	45.614	ENSLBEG00000022630	-	80	45.614
ENSLBEG00000028426	RAB1A	74	42.581	ENSLBEG00000018063	-	64	42.581
ENSLBEG00000028426	RAB1A	58	30.328	ENSLBEG00000010335	-	61	30.328
ENSLBEG00000028426	RAB1A	82	35.329	ENSLBEG00000025705	si:ch73-116o1.2	80	35.329
ENSLBEG00000028426	RAB1A	87	42.697	ENSLBEG00000001193	rab42a	82	42.697
ENSLBEG00000028426	RAB1A	100	93.596	ENSLBEG00000027781	rab1ab	100	93.596
ENSLBEG00000028426	RAB1A	87	39.773	ENSLBEG00000003235	rab22a	91	39.773
ENSLBEG00000028426	RAB1A	82	37.059	ENSLBEG00000018180	si:dkey-13a21.4	83	37.059
ENSLBEG00000028426	RAB1A	80	40.120	ENSLBEG00000011478	rab9b	76	40.120
ENSLBEG00000028426	RAB1A	82	33.133	ENSLBEG00000019137	rhebl1	85	33.133
ENSLBEG00000028426	RAB1A	62	33.083	ENSLBEG00000011152	arl4d	66	33.083
ENSLBEG00000028426	RAB1A	81	47.239	ENSLBEG00000010408	-	88	44.388
ENSLBEG00000028426	RAB1A	90	32.973	ENSLBEG00000013176	rab23	86	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028426	RAB1A	100	95.050	ENSG00000138069	RAB1A	98	100.000	Homo_sapiens
ENSLBEG00000028426	RAB1A	100	99.010	ENSAPOG00000008143	-	100	99.010	Acanthochromis_polyacanthus
ENSLBEG00000028426	RAB1A	100	95.050	ENSAMEG00000001127	RAB1A	99	95.050	Ailuropoda_melanoleuca
ENSLBEG00000028426	RAB1A	100	99.010	ENSAOCG00000020606	-	100	99.010	Amphiprion_ocellaris
ENSLBEG00000028426	RAB1A	100	99.010	ENSAPEG00000022488	-	100	99.010	Amphiprion_percula
ENSLBEG00000028426	RAB1A	100	95.050	ENSANAG00000020929	RAB1A	99	95.050	Aotus_nancymaae
ENSLBEG00000028426	RAB1A	100	98.515	ENSACLG00000003326	-	100	98.515	Astatotilapia_calliptera
ENSLBEG00000028426	RAB1A	100	92.079	ENSAMXG00000034850	-	100	92.079	Astyanax_mexicanus
ENSLBEG00000028426	RAB1A	100	95.050	ENSBTAG00000016720	RAB1A	99	95.050	Bos_taurus
ENSLBEG00000028426	RAB1A	100	95.050	ENSCJAG00000046275	RAB1A	99	95.050	Callithrix_jacchus
ENSLBEG00000028426	RAB1A	100	95.050	ENSCAFG00000003187	RAB1A	99	95.050	Canis_familiaris
ENSLBEG00000028426	RAB1A	100	95.050	ENSCAFG00020026971	RAB1A	99	95.050	Canis_lupus_dingo
ENSLBEG00000028426	RAB1A	98	94.924	ENSCHIG00000014060	RAB1A	100	92.195	Capra_hircus
ENSLBEG00000028426	RAB1A	100	93.564	ENSTSYG00000005996	RAB1A	100	94.924	Carlito_syrichta
ENSLBEG00000028426	RAB1A	100	95.050	ENSCPOG00000015437	RAB1A	99	95.050	Cavia_porcellus
ENSLBEG00000028426	RAB1A	100	95.050	ENSCCAG00000021869	RAB1A	99	95.050	Cebus_capucinus
ENSLBEG00000028426	RAB1A	100	95.050	ENSCATG00000030853	RAB1A	99	95.050	Cercocebus_atys
ENSLBEG00000028426	RAB1A	100	95.050	ENSCLAG00000014766	RAB1A	99	95.050	Chinchilla_lanigera
ENSLBEG00000028426	RAB1A	100	95.545	ENSCPBG00000013243	RAB1A	99	95.545	Chrysemys_picta_bellii
ENSLBEG00000028426	RAB1A	100	92.574	ENSCANG00000035916	RAB1A	99	92.574	Colobus_angolensis_palliatus
ENSLBEG00000028426	RAB1A	100	95.050	ENSCGRG00001012691	-	99	95.050	Cricetulus_griseus_chok1gshd
ENSLBEG00000028426	RAB1A	100	95.050	ENSCGRG00000008456	-	99	95.050	Cricetulus_griseus_crigri
ENSLBEG00000028426	RAB1A	100	95.050	ENSDNOG00000018236	RAB1A	99	95.050	Dasypus_novemcinctus
ENSLBEG00000028426	RAB1A	100	95.050	ENSDORG00000028628	-	99	95.050	Dipodomys_ordii
ENSLBEG00000028426	RAB1A	100	84.729	FBgn0285937	Rab1	99	84.729	Drosophila_melanogaster
ENSLBEG00000028426	RAB1A	100	95.050	ENSETEG00000002205	RAB1A	100	95.050	Echinops_telfairi
ENSLBEG00000028426	RAB1A	100	95.050	ENSEASG00005007298	RAB1A	99	95.050	Equus_asinus_asinus
ENSLBEG00000028426	RAB1A	100	95.050	ENSECAG00000009926	RAB1A	99	95.050	Equus_caballus
ENSLBEG00000028426	RAB1A	100	95.050	ENSEEUG00000011721	RAB1A	100	95.050	Erinaceus_europaeus
ENSLBEG00000028426	RAB1A	100	96.078	ENSELUG00000012166	RAB1A	96	96.078	Esox_lucius
ENSLBEG00000028426	RAB1A	100	95.050	ENSFCAG00000002536	RAB1A	99	95.050	Felis_catus
ENSLBEG00000028426	RAB1A	100	93.564	ENSFALG00000013624	RAB1A	99	93.564	Ficedula_albicollis
ENSLBEG00000028426	RAB1A	100	95.050	ENSFDAG00000019505	-	99	95.050	Fukomys_damarensis
ENSLBEG00000028426	RAB1A	100	98.020	ENSFHEG00000014414	-	100	98.020	Fundulus_heteroclitus
ENSLBEG00000028426	RAB1A	100	95.545	ENSGALG00000031582	RAB1A	99	95.545	Gallus_gallus
ENSLBEG00000028426	RAB1A	100	96.535	ENSGAFG00000000918	-	100	96.535	Gambusia_affinis
ENSLBEG00000028426	RAB1A	100	95.545	ENSGAGG00000006802	RAB1A	99	95.545	Gopherus_agassizii
ENSLBEG00000028426	RAB1A	100	95.050	ENSGGOG00000026603	RAB1A	99	95.050	Gorilla_gorilla
ENSLBEG00000028426	RAB1A	100	95.050	ENSHGLG00000013585	RAB1A	99	95.050	Heterocephalus_glaber_female
ENSLBEG00000028426	RAB1A	100	93.564	ENSHGLG00100007994	RAB1A	99	93.564	Heterocephalus_glaber_male
ENSLBEG00000028426	RAB1A	100	95.050	ENSSTOG00000020693	-	99	95.050	Ictidomys_tridecemlineatus
ENSLBEG00000028426	RAB1A	98	94.924	ENSJJAG00000014396	Rab1a	100	94.924	Jaculus_jaculus
ENSLBEG00000028426	RAB1A	98	98.477	ENSKMAG00000014038	-	93	98.477	Kryptolebias_marmoratus
ENSLBEG00000028426	RAB1A	100	96.040	ENSLACG00000012869	RAB1A	99	96.040	Latimeria_chalumnae
ENSLBEG00000028426	RAB1A	100	95.050	ENSLAFG00000016666	RAB1A	99	95.050	Loxodonta_africana
ENSLBEG00000028426	RAB1A	100	95.050	ENSMFAG00000046246	RAB1A	99	95.050	Macaca_fascicularis
ENSLBEG00000028426	RAB1A	98	94.924	ENSMMUG00000021721	RAB1A	91	94.924	Macaca_mulatta
ENSLBEG00000028426	RAB1A	95	96.335	ENSMNEG00000028414	-	96	96.335	Macaca_nemestrina
ENSLBEG00000028426	RAB1A	100	95.050	ENSMLEG00000042535	RAB1A	99	95.050	Mandrillus_leucophaeus
ENSLBEG00000028426	RAB1A	100	98.515	ENSMZEG00005013959	-	100	98.515	Maylandia_zebra
ENSLBEG00000028426	RAB1A	98	95.431	ENSMGAG00000004611	RAB1A	98	95.431	Meleagris_gallopavo
ENSLBEG00000028426	RAB1A	100	94.554	ENSMAUG00000012156	Rab1a	99	94.554	Mesocricetus_auratus
ENSLBEG00000028426	RAB1A	100	95.050	ENSMICG00000012587	RAB1A	99	95.050	Microcebus_murinus
ENSLBEG00000028426	RAB1A	100	94.554	ENSMOCG00000017022	Rab1a	99	94.554	Microtus_ochrogaster
ENSLBEG00000028426	RAB1A	100	96.535	ENSMMOG00000018709	RAB1A	100	96.535	Mola_mola
ENSLBEG00000028426	RAB1A	100	95.545	ENSMODG00000003340	RAB1A	99	95.545	Monodelphis_domestica
ENSLBEG00000028426	RAB1A	100	95.050	MGP_CAROLIEiJ_G0016115	Rab1a	99	95.050	Mus_caroli
ENSLBEG00000028426	RAB1A	100	95.050	ENSMUSG00000020149	Rab1a	100	95.050	Mus_musculus
ENSLBEG00000028426	RAB1A	100	95.050	MGP_PahariEiJ_G0016776	Rab1a	99	95.050	Mus_pahari
ENSLBEG00000028426	RAB1A	100	95.050	MGP_SPRETEiJ_G0016958	Rab1a	100	95.050	Mus_spretus
ENSLBEG00000028426	RAB1A	100	95.050	ENSMPUG00000006139	RAB1A	80	95.050	Mustela_putorius_furo
ENSLBEG00000028426	RAB1A	100	95.050	ENSMLUG00000009489	RAB1A	99	95.050	Myotis_lucifugus
ENSLBEG00000028426	RAB1A	100	95.050	ENSNGAG00000005838	Rab1a	99	95.050	Nannospalax_galili
ENSLBEG00000028426	RAB1A	100	98.515	ENSNBRG00000020492	-	100	98.515	Neolamprologus_brichardi
ENSLBEG00000028426	RAB1A	98	94.924	ENSOPRG00000006595	RAB1A	100	94.924	Ochotona_princeps
ENSLBEG00000028426	RAB1A	94	94.709	ENSODEG00000011248	-	96	94.792	Octodon_degus
ENSLBEG00000028426	RAB1A	100	96.535	ENSONIG00000006819	-	99	96.535	Oreochromis_niloticus
ENSLBEG00000028426	RAB1A	100	95.545	ENSOANG00000012438	RAB1A	99	95.545	Ornithorhynchus_anatinus
ENSLBEG00000028426	RAB1A	100	95.050	ENSOCUG00000017003	RAB1A	99	95.050	Oryctolagus_cuniculus
ENSLBEG00000028426	RAB1A	100	95.050	ENSOGAG00000026181	RAB1A	99	95.050	Otolemur_garnettii
ENSLBEG00000028426	RAB1A	98	94.924	ENSOARG00000019997	RAB1A	97	94.924	Ovis_aries
ENSLBEG00000028426	RAB1A	100	95.050	ENSPPAG00000030253	RAB1A	100	95.050	Pan_paniscus
ENSLBEG00000028426	RAB1A	100	95.050	ENSPPRG00000025077	RAB1A	99	95.050	Panthera_pardus
ENSLBEG00000028426	RAB1A	98	94.924	ENSPTIG00000013471	RAB1A	97	94.924	Panthera_tigris_altaica
ENSLBEG00000028426	RAB1A	100	95.050	ENSPTRG00000011989	RAB1A	99	95.050	Pan_troglodytes
ENSLBEG00000028426	RAB1A	100	95.050	ENSPANG00000010485	RAB1A	99	95.050	Papio_anubis
ENSLBEG00000028426	RAB1A	100	93.069	ENSPSIG00000008028	RAB1A	99	93.069	Pelodiscus_sinensis
ENSLBEG00000028426	RAB1A	100	98.020	ENSPMGG00000021015	-	99	98.020	Periophthalmus_magnuspinnatus
ENSLBEG00000028426	RAB1A	100	95.050	ENSPEMG00000009340	Rab1a	99	95.050	Peromyscus_maniculatus_bairdii
ENSLBEG00000028426	RAB1A	100	95.545	ENSPCIG00000023212	RAB1A	99	95.545	Phascolarctos_cinereus
ENSLBEG00000028426	RAB1A	100	96.040	ENSPFOG00000000498	-	98	96.040	Poecilia_formosa
ENSLBEG00000028426	RAB1A	100	96.040	ENSPLAG00000015592	-	100	96.040	Poecilia_latipinna
ENSLBEG00000028426	RAB1A	100	96.040	ENSPMEG00000005288	-	100	96.040	Poecilia_mexicana
ENSLBEG00000028426	RAB1A	100	95.050	ENSPPYG00000012360	RAB1A	99	95.050	Pongo_abelii
ENSLBEG00000028426	RAB1A	100	95.050	ENSPCOG00000017244	RAB1A	99	95.050	Propithecus_coquereli
ENSLBEG00000028426	RAB1A	100	98.515	ENSPNYG00000015841	-	100	98.515	Pundamilia_nyererei
ENSLBEG00000028426	RAB1A	100	95.050	ENSRNOG00000004992	Rab1a	99	95.050	Rattus_norvegicus
ENSLBEG00000028426	RAB1A	100	95.050	ENSSBOG00000023732	RAB1A	99	95.050	Saimiri_boliviensis_boliviensis
ENSLBEG00000028426	RAB1A	98	95.431	ENSSHAG00000003597	RAB1A	98	94.030	Sarcophilus_harrisii
ENSLBEG00000028426	RAB1A	100	99.505	ENSSMAG00000021049	-	100	99.505	Scophthalmus_maximus
ENSLBEG00000028426	RAB1A	100	98.515	ENSSDUG00000022535	RAB1A	100	98.515	Seriola_dumerili
ENSLBEG00000028426	RAB1A	100	95.545	ENSSPUG00000012822	RAB1A	99	95.545	Sphenodon_punctatus
ENSLBEG00000028426	RAB1A	100	99.010	ENSSPAG00000012564	-	100	99.010	Stegastes_partitus
ENSLBEG00000028426	RAB1A	100	95.050	ENSSSCG00000008359	RAB1A	100	94.924	Sus_scrofa
ENSLBEG00000028426	RAB1A	100	93.564	ENSTGUG00000002328	RAB1A	99	93.564	Taeniopygia_guttata
ENSLBEG00000028426	RAB1A	100	98.515	ENSTRUG00000024994	RAB1A	100	98.515	Takifugu_rubripes
ENSLBEG00000028426	RAB1A	98	94.924	ENSUMAG00000021038	RAB1A	99	94.924	Ursus_maritimus
ENSLBEG00000028426	RAB1A	98	94.444	ENSVPAG00000005640	RAB1A	99	94.444	Vicugna_pacos
ENSLBEG00000028426	RAB1A	100	95.050	ENSVVUG00000027588	RAB1A	99	95.050	Vulpes_vulpes
ENSLBEG00000028426	RAB1A	100	96.535	ENSXMAG00000015776	-	100	96.535	Xiphophorus_maculatus