EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000028485 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain-helicase-DNA-binding protein 3-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 29513 bases
Position: chrFKLU01000024.1:2478520-2508032
Accession: 109980699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038221	ResIII	PF04851.15	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039788	-	5586	XM_020629176	ENSLBEP00000038221	1861 (aa)	XP_020484832	-

Gene Model

Click here to download ENSLBEG00000028485's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028485's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000028485	chd3	76	70.548	ENSLBEG00000026652	-	95	70.411
ENSLBEG00000028485	chd3	87	72.840	ENSLBEG00000012434	CHD4	85	72.840

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028485	chd3	92	81.008	ENSG00000170004	CHD3	87	81.008	Homo_sapiens
ENSLBEG00000028485	chd3	85	86.606	ENSAPOG00000005614	chd3	99	85.221	Acanthochromis_polyacanthus
ENSLBEG00000028485	chd3	63	73.122	ENSAMEG00000003025	-	98	71.226	Ailuropoda_melanoleuca
ENSLBEG00000028485	chd3	85	85.504	ENSACIG00000019671	chd3	99	85.714	Amphilophus_citrinellus
ENSLBEG00000028485	chd3	93	95.935	ENSAOCG00000023784	chd3	99	86.728	Amphiprion_ocellaris
ENSLBEG00000028485	chd3	93	95.935	ENSAPEG00000006341	chd3	89	94.841	Amphiprion_percula
ENSLBEG00000028485	chd3	91	93.496	ENSATEG00000000848	chd3	89	92.460	Anabas_testudineus
ENSLBEG00000028485	chd3	90	83.534	ENSACAG00000004276	CHD3	84	83.534	Anolis_carolinensis
ENSLBEG00000028485	chd3	90	81.890	ENSANAG00000034323	CHD3	86	81.890	Aotus_nancymaae
ENSLBEG00000028485	chd3	93	84.529	ENSACLG00000009222	chd3	90	92.697	Astatotilapia_calliptera
ENSLBEG00000028485	chd3	91	88.261	ENSBTAG00000014377	CHD3	87	88.261	Bos_taurus
ENSLBEG00000028485	chd3	92	81.008	ENSCJAG00000014766	CHD3	95	70.601	Callithrix_jacchus
ENSLBEG00000028485	chd3	94	70.505	ENSCAFG00000016859	CHD3	95	69.211	Canis_familiaris
ENSLBEG00000028485	chd3	90	72.997	ENSCAFG00020007422	CHD3	98	71.889	Canis_lupus_dingo
ENSLBEG00000028485	chd3	92	80.469	ENSCHIG00000016737	CHD3	90	73.545	Capra_hircus
ENSLBEG00000028485	chd3	91	87.826	ENSTSYG00000035658	CHD3	98	67.795	Carlito_syrichta
ENSLBEG00000028485	chd3	91	87.826	ENSCAPG00000014864	CHD3	95	66.546	Cavia_aperea
ENSLBEG00000028485	chd3	91	87.826	ENSCPOG00000022653	CHD3	95	68.932	Cavia_porcellus
ENSLBEG00000028485	chd3	92	81.008	ENSCCAG00000034792	CHD3	92	70.901	Cebus_capucinus
ENSLBEG00000028485	chd3	92	81.008	ENSCATG00000041717	CHD3	95	70.706	Cercocebus_atys
ENSLBEG00000028485	chd3	91	87.826	ENSCLAG00000010523	CHD3	97	70.554	Chinchilla_lanigera
ENSLBEG00000028485	chd3	92	81.008	ENSCSAG00000011122	CHD3	91	73.382	Chlorocebus_sabaeus
ENSLBEG00000028485	chd3	89	74.106	ENSCPBG00000011966	CHD3	99	74.207	Chrysemys_picta_bellii
ENSLBEG00000028485	chd3	92	81.008	ENSCANG00000037641	CHD3	92	74.066	Colobus_angolensis_palliatus
ENSLBEG00000028485	chd3	91	87.826	ENSCGRG00001011306	Chd3	97	69.826	Cricetulus_griseus_chok1gshd
ENSLBEG00000028485	chd3	90	73.713	ENSCGRG00000007878	Chd3	83	77.621	Cricetulus_griseus_crigri
ENSLBEG00000028485	chd3	93	86.348	ENSCSEG00000004489	chd3	99	86.292	Cynoglossus_semilaevis
ENSLBEG00000028485	chd3	93	83.608	ENSCVAG00000007293	chd3	99	82.948	Cyprinodon_variegatus
ENSLBEG00000028485	chd3	93	78.283	ENSDARG00000021405	chd3	96	78.962	Danio_rerio
ENSLBEG00000028485	chd3	83	82.534	ENSDNOG00000047846	CHD3	82	83.128	Dasypus_novemcinctus
ENSLBEG00000028485	chd3	92	80.620	ENSDORG00000010713	Chd3	87	87.826	Dipodomys_ordii
ENSLBEG00000028485	chd3	91	86.522	ENSETEG00000017733	CHD3	89	86.522	Echinops_telfairi
ENSLBEG00000028485	chd3	66	86.730	ENSEBUG00000008310	chd3	85	83.556	Eptatretus_burgeri
ENSLBEG00000028485	chd3	87	75.986	ENSEASG00005019360	CHD3	92	75.986	Equus_asinus_asinus
ENSLBEG00000028485	chd3	88	71.477	ENSECAG00000010051	CHD3	98	70.350	Equus_caballus
ENSLBEG00000028485	chd3	85	75.610	ENSEEUG00000015205	CHD3	83	75.610	Erinaceus_europaeus
ENSLBEG00000028485	chd3	80	96.599	ENSELUG00000019499	chd3	99	96.599	Esox_lucius
ENSLBEG00000028485	chd3	91	86.957	ENSFCAG00000009629	CHD3	92	69.522	Felis_catus
ENSLBEG00000028485	chd3	89	75.986	ENSFDAG00000008220	CHD3	86	75.986	Fukomys_damarensis
ENSLBEG00000028485	chd3	87	90.086	ENSGMOG00000013599	chd3	86	90.086	Gadus_morhua
ENSLBEG00000028485	chd3	61	86.240	ENSGAFG00000004055	chd3	99	87.018	Gambusia_affinis
ENSLBEG00000028485	chd3	89	93.089	ENSGACG00000019275	chd3	89	91.600	Gasterosteus_aculeatus
ENSLBEG00000028485	chd3	76	72.030	ENSGAGG00000013164	CHD3	99	73.149	Gopherus_agassizii
ENSLBEG00000028485	chd3	92	81.008	ENSGGOG00000013496	CHD3	98	69.636	Gorilla_gorilla
ENSLBEG00000028485	chd3	93	75.986	ENSHGLG00000012017	CHD3	89	75.986	Heterocephalus_glaber_female
ENSLBEG00000028485	chd3	82	78.862	ENSHGLG00100013902	CHD3	88	78.400	Heterocephalus_glaber_male
ENSLBEG00000028485	chd3	94	86.415	ENSHCOG00000010170	chd3	90	86.415	Hippocampus_comes
ENSLBEG00000028485	chd3	85	80.465	ENSIPUG00000003271	chd3	93	80.270	Ictalurus_punctatus
ENSLBEG00000028485	chd3	92	80.233	ENSSTOG00000025907	CHD3	97	70.570	Ictidomys_tridecemlineatus
ENSLBEG00000028485	chd3	92	78.598	ENSJJAG00000017633	Chd3	96	73.298	Jaculus_jaculus
ENSLBEG00000028485	chd3	90	89.912	ENSKMAG00000019292	chd3	99	82.388	Kryptolebias_marmoratus
ENSLBEG00000028485	chd3	90	81.467	ENSLACG00000008031	CHD3	95	68.793	Latimeria_chalumnae
ENSLBEG00000028485	chd3	90	87.600	ENSLOCG00000013965	chd3	84	86.905	Lepisosteus_oculatus
ENSLBEG00000028485	chd3	91	88.938	ENSLAFG00000000572	CHD3	92	88.938	Loxodonta_africana
ENSLBEG00000028485	chd3	92	81.008	ENSMFAG00000020113	CHD3	92	75.287	Macaca_fascicularis
ENSLBEG00000028485	chd3	92	81.890	ENSMMUG00000022221	CHD3	90	72.528	Macaca_mulatta
ENSLBEG00000028485	chd3	92	81.008	ENSMNEG00000001728	CHD3	92	74.557	Macaca_nemestrina
ENSLBEG00000028485	chd3	92	81.008	ENSMLEG00000032249	CHD3	95	70.706	Mandrillus_leucophaeus
ENSLBEG00000028485	chd3	85	84.518	ENSMAMG00000000564	chd3	99	84.880	Mastacembelus_armatus
ENSLBEG00000028485	chd3	91	87.826	ENSMAUG00000013873	Chd3	88	75.986	Mesocricetus_auratus
ENSLBEG00000028485	chd3	93	76.344	ENSMICG00000008741	CHD3	93	67.924	Microcebus_murinus
ENSLBEG00000028485	chd3	93	75.899	ENSMOCG00000004848	Chd3	97	70.285	Microtus_ochrogaster
ENSLBEG00000028485	chd3	89	96.581	ENSMMOG00000012699	chd3	98	83.635	Mola_mola
ENSLBEG00000028485	chd3	88	72.384	ENSMODG00000007509	CHD3	96	72.701	Monodelphis_domestica
ENSLBEG00000028485	chd3	91	87.826	MGP_CAROLIEiJ_G0016564	Chd3	96	71.405	Mus_caroli
ENSLBEG00000028485	chd3	91	87.826	ENSMUSG00000018474	Chd3	96	71.398	Mus_musculus
ENSLBEG00000028485	chd3	92	87.826	MGP_PahariEiJ_G0017695	Chd3	96	71.475	Mus_pahari
ENSLBEG00000028485	chd3	93	75.986	MGP_SPRETEiJ_G0017400	Chd3	96	71.429	Mus_spretus
ENSLBEG00000028485	chd3	82	71.781	ENSMPUG00000008861	CHD3	98	70.436	Mustela_putorius_furo
ENSLBEG00000028485	chd3	92	82.661	ENSMLUG00000014643	-	87	82.000	Myotis_lucifugus
ENSLBEG00000028485	chd3	91	87.826	ENSNGAG00000000773	Chd3	88	75.986	Nannospalax_galili
ENSLBEG00000028485	chd3	86	83.323	ENSNBRG00000000636	chd3	98	84.022	Neolamprologus_brichardi
ENSLBEG00000028485	chd3	94	69.663	ENSNLEG00000009770	CHD3	96	69.157	Nomascus_leucogenys
ENSLBEG00000028485	chd3	83	75.540	ENSMEUG00000005852	CHD3	83	75.540	Notamacropus_eugenii
ENSLBEG00000028485	chd3	90	71.067	ENSOPRG00000011069	CHD3	96	70.996	Ochotona_princeps
ENSLBEG00000028485	chd3	91	87.826	ENSODEG00000017785	CHD3	89	75.986	Octodon_degus
ENSLBEG00000028485	chd3	91	95.935	ENSONIG00000009292	chd3	94	94.094	Oreochromis_niloticus
ENSLBEG00000028485	chd3	92	72.060	ENSOCUG00000029299	CHD3	89	71.881	Oryctolagus_cuniculus
ENSLBEG00000028485	chd3	81	84.492	ENSORLG00000007107	chd3	98	83.200	Oryzias_latipes
ENSLBEG00000028485	chd3	53	89.444	ENSORLG00020008387	chd3	90	88.889	Oryzias_latipes_hni
ENSLBEG00000028485	chd3	83	92.000	ENSOMEG00000013691	chd3	99	82.854	Oryzias_melastigma
ENSLBEG00000028485	chd3	91	87.826	ENSOGAG00000003216	CHD3	87	87.826	Otolemur_garnettii
ENSLBEG00000028485	chd3	92	77.165	ENSOARG00000017855	CHD3	89	72.636	Ovis_aries
ENSLBEG00000028485	chd3	92	81.890	ENSPPAG00000032886	CHD3	89	82.800	Pan_paniscus
ENSLBEG00000028485	chd3	91	87.391	ENSPPRG00000000626	CHD3	93	71.824	Panthera_pardus
ENSLBEG00000028485	chd3	92	81.008	ENSPTRG00000008714	CHD3	92	74.066	Pan_troglodytes
ENSLBEG00000028485	chd3	92	81.008	ENSPANG00000023938	CHD3	92	75.287	Papio_anubis
ENSLBEG00000028485	chd3	91	92.276	ENSPKIG00000006305	chd3	88	92.339	Paramormyrops_kingsleyae
ENSLBEG00000028485	chd3	54	78.891	ENSPSIG00000010177	CHD3	97	76.433	Pelodiscus_sinensis
ENSLBEG00000028485	chd3	91	87.826	ENSPEMG00000014262	Chd3	89	75.986	Peromyscus_maniculatus_bairdii
ENSLBEG00000028485	chd3	92	75.566	ENSPCIG00000005442	CHD3	97	73.751	Phascolarctos_cinereus
ENSLBEG00000028485	chd3	93	93.200	ENSPFOG00000012464	chd3	84	93.254	Poecilia_formosa
ENSLBEG00000028485	chd3	92	84.590	ENSPLAG00000002887	chd3	92	92.056	Poecilia_latipinna
ENSLBEG00000028485	chd3	55	90.654	ENSPMEG00000016725	chd3	91	92.056	Poecilia_mexicana
ENSLBEG00000028485	chd3	91	91.632	ENSPREG00000011044	chd3	95	84.692	Poecilia_reticulata
ENSLBEG00000028485	chd3	91	80.620	ENSPPYG00000007940	CHD3	91	71.010	Pongo_abelii
ENSLBEG00000028485	chd3	87	74.034	ENSPCAG00000004350	CHD3	93	72.090	Procavia_capensis
ENSLBEG00000028485	chd3	94	71.527	ENSPCOG00000020952	CHD3	93	70.250	Propithecus_coquereli
ENSLBEG00000028485	chd3	79	70.905	ENSPVAG00000016344	CHD3	81	70.672	Pteropus_vampyrus
ENSLBEG00000028485	chd3	91	91.463	ENSPNAG00000020393	chd3	96	81.576	Pygocentrus_nattereri
ENSLBEG00000028485	chd3	84	87.826	ENSRNOG00000009722	Chd3	91	75.986	Rattus_norvegicus
ENSLBEG00000028485	chd3	92	81.008	ENSRBIG00000033562	CHD3	92	72.334	Rhinopithecus_bieti
ENSLBEG00000028485	chd3	92	81.008	ENSRROG00000029554	CHD3	95	70.706	Rhinopithecus_roxellana
ENSLBEG00000028485	chd3	92	81.008	ENSSBOG00000020719	CHD3	93	73.662	Saimiri_boliviensis_boliviensis
ENSLBEG00000028485	chd3	94	70.997	ENSSHAG00000014412	CHD3	95	72.104	Sarcophilus_harrisii
ENSLBEG00000028485	chd3	84	79.607	ENSSFOG00015023123	chd3	95	74.019	Scleropages_formosus
ENSLBEG00000028485	chd3	84	96.957	ENSSMAG00000006451	chd3	91	94.118	Scophthalmus_maximus
ENSLBEG00000028485	chd3	52	92.571	ENSSDUG00000005792	chd3	91	94.286	Seriola_dumerili
ENSLBEG00000028485	chd3	93	95.935	ENSSPAG00000013694	chd3	99	86.241	Stegastes_partitus
ENSLBEG00000028485	chd3	92	80.556	ENSSSCG00000021363	CHD3	92	77.949	Sus_scrofa
ENSLBEG00000028485	chd3	77	88.079	ENSTRUG00000014990	chd3	89	87.348	Takifugu_rubripes
ENSLBEG00000028485	chd3	92	81.689	ENSTNIG00000012998	chd3	95	81.267	Tetraodon_nigroviridis
ENSLBEG00000028485	chd3	59	85.047	ENSTBEG00000011454	-	63	85.047	Tupaia_belangeri
ENSLBEG00000028485	chd3	85	87.391	ENSTTRG00000010295	CHD3	91	71.401	Tursiops_truncatus
ENSLBEG00000028485	chd3	92	71.571	ENSUAMG00000005475	CHD3	94	74.728	Ursus_americanus
ENSLBEG00000028485	chd3	52	91.304	ENSVPAG00000010794	-	56	92.593	Vicugna_pacos
ENSLBEG00000028485	chd3	98	70.057	ENSVVUG00000028011	CHD3	97	70.188	Vulpes_vulpes
ENSLBEG00000028485	chd3	91	82.072	ENSXETG00000012991	chd3	88	64.136	Xenopus_tropicalis
ENSLBEG00000028485	chd3	61	81.504	ENSXCOG00000000809	chd3	96	88.076	Xiphophorus_couchianus
ENSLBEG00000028485	chd3	85	82.215	ENSXMAG00000016035	chd3	99	82.657	Xiphophorus_maculatus