EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000028494 (Gene tree)
Gene ID: 109988170
Gene Symbol: si:dkey-19e4.5
Alias: fb82g02|wu:fb82g02
Full Name: probable peptidyl-tRNA hydrolase 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 8700 bases
Position: chrFKLU01000133.1:462389-471088
Accession: 109988170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038232	PTH2	PF01981.16	3.4e-35	1	1
ENSLBEP00000038233	PTH2	PF01981.16	4e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039800	-	805	XM_020639577	ENSLBEP00000038233	184 (aa)	XP_020495233	UPI0009B39BE0
ENSLBET00000039799	-	528	-	ENSLBEP00000038232	175 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000028494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000028494	si:dkey-19e4.5	66	48.276	ENSLBEG00000004103	ptrh2	60	48.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028494	si:dkey-19e4.5	100	96.739	ENSAPOG00000018297	si:dkey-19e4.5	100	96.739	Acanthochromis_polyacanthus
ENSLBEG00000028494	si:dkey-19e4.5	98	96.491	ENSACIG00000001450	si:dkey-19e4.5	97	96.491	Amphilophus_citrinellus
ENSLBEG00000028494	si:dkey-19e4.5	100	96.739	ENSAOCG00000000622	si:dkey-19e4.5	100	96.739	Amphiprion_ocellaris
ENSLBEG00000028494	si:dkey-19e4.5	100	96.739	ENSAPEG00000017071	si:dkey-19e4.5	100	96.739	Amphiprion_percula
ENSLBEG00000028494	si:dkey-19e4.5	100	91.304	ENSATEG00000003450	si:dkey-19e4.5	100	91.304	Anabas_testudineus
ENSLBEG00000028494	si:dkey-19e4.5	65	71.930	ENSACAG00000028513	-	99	71.930	Anolis_carolinensis
ENSLBEG00000028494	si:dkey-19e4.5	100	95.652	ENSACLG00000026360	si:dkey-19e4.5	100	95.652	Astatotilapia_calliptera
ENSLBEG00000028494	si:dkey-19e4.5	100	88.043	ENSAMXG00000016302	si:dkey-19e4.5	100	88.043	Astyanax_mexicanus
ENSLBEG00000028494	si:dkey-19e4.5	100	37.436	WBGene00016062	C24G6.8	61	37.755	Caenorhabditis_elegans
ENSLBEG00000028494	si:dkey-19e4.5	97	93.491	ENSCVAG00000018623	si:dkey-19e4.5	100	90.217	Cyprinodon_variegatus
ENSLBEG00000028494	si:dkey-19e4.5	99	90.230	ENSDARG00000089886	si:dkey-19e4.5	99	90.230	Danio_rerio
ENSLBEG00000028494	si:dkey-19e4.5	99	91.379	ENSELUG00000012877	si:dkey-19e4.5	100	89.840	Esox_lucius
ENSLBEG00000028494	si:dkey-19e4.5	98	90.643	ENSFHEG00000017879	si:dkey-19e4.5	98	91.228	Fundulus_heteroclitus
ENSLBEG00000028494	si:dkey-19e4.5	77	94.776	ENSGMOG00000018615	si:dkey-19e4.5	100	94.776	Gadus_morhua
ENSLBEG00000028494	si:dkey-19e4.5	98	91.228	ENSGAFG00000008238	si:dkey-19e4.5	95	89.130	Gambusia_affinis
ENSLBEG00000028494	si:dkey-19e4.5	77	97.015	ENSGACG00000011371	si:dkey-19e4.5	100	97.015	Gasterosteus_aculeatus
ENSLBEG00000028494	si:dkey-19e4.5	100	95.652	ENSHBUG00000003898	si:dkey-19e4.5	100	95.652	Haplochromis_burtoni
ENSLBEG00000028494	si:dkey-19e4.5	100	87.568	ENSHCOG00000011175	si:dkey-19e4.5	100	87.568	Hippocampus_comes
ENSLBEG00000028494	si:dkey-19e4.5	100	86.413	ENSIPUG00000023250	si:dkey-19e4.5	100	86.413	Ictalurus_punctatus
ENSLBEG00000028494	si:dkey-19e4.5	100	86.957	ENSKMAG00000018142	si:dkey-19e4.5	100	86.957	Kryptolebias_marmoratus
ENSLBEG00000028494	si:dkey-19e4.5	99	67.816	ENSLACG00000003702	si:dkey-19e4.5	99	66.120	Latimeria_chalumnae
ENSLBEG00000028494	si:dkey-19e4.5	100	86.413	ENSLOCG00000013652	si:dkey-19e4.5	100	86.413	Lepisosteus_oculatus
ENSLBEG00000028494	si:dkey-19e4.5	100	94.565	ENSMAMG00000023661	si:dkey-19e4.5	100	94.565	Mastacembelus_armatus
ENSLBEG00000028494	si:dkey-19e4.5	100	95.652	ENSMZEG00005006058	si:dkey-19e4.5	100	95.652	Maylandia_zebra
ENSLBEG00000028494	si:dkey-19e4.5	100	92.391	ENSMMOG00000009678	si:dkey-19e4.5	100	92.391	Mola_mola
ENSLBEG00000028494	si:dkey-19e4.5	99	92.529	ENSMALG00000021083	si:dkey-19e4.5	99	92.529	Monopterus_albus
ENSLBEG00000028494	si:dkey-19e4.5	82	72.789	ENSNBRG00000018523	si:dkey-19e4.5	71	73.649	Neolamprologus_brichardi
ENSLBEG00000028494	si:dkey-19e4.5	100	84.783	ENSORLG00000010093	si:dkey-19e4.5	100	84.783	Oryzias_latipes
ENSLBEG00000028494	si:dkey-19e4.5	100	84.783	ENSORLG00020005940	si:dkey-19e4.5	100	84.783	Oryzias_latipes_hni
ENSLBEG00000028494	si:dkey-19e4.5	100	84.783	ENSORLG00015002105	si:dkey-19e4.5	100	84.783	Oryzias_latipes_hsok
ENSLBEG00000028494	si:dkey-19e4.5	99	86.782	ENSOMEG00000001615	si:dkey-19e4.5	99	86.782	Oryzias_melastigma
ENSLBEG00000028494	si:dkey-19e4.5	100	88.587	ENSPKIG00000018613	-	100	88.587	Paramormyrops_kingsleyae
ENSLBEG00000028494	si:dkey-19e4.5	99	79.885	ENSPKIG00000016249	-	100	78.804	Paramormyrops_kingsleyae
ENSLBEG00000028494	si:dkey-19e4.5	100	88.649	ENSPFOG00000011934	si:dkey-19e4.5	100	89.189	Poecilia_formosa
ENSLBEG00000028494	si:dkey-19e4.5	100	89.130	ENSPLAG00000012878	si:dkey-19e4.5	100	89.130	Poecilia_latipinna
ENSLBEG00000028494	si:dkey-19e4.5	100	88.649	ENSPMEG00000015916	si:dkey-19e4.5	100	89.189	Poecilia_mexicana
ENSLBEG00000028494	si:dkey-19e4.5	100	89.130	ENSPREG00000021009	si:dkey-19e4.5	100	89.130	Poecilia_reticulata
ENSLBEG00000028494	si:dkey-19e4.5	100	95.652	ENSPNYG00000007117	si:dkey-19e4.5	100	95.652	Pundamilia_nyererei
ENSLBEG00000028494	si:dkey-19e4.5	100	88.587	ENSPNAG00000009107	si:dkey-19e4.5	100	88.587	Pygocentrus_nattereri
ENSLBEG00000028494	si:dkey-19e4.5	100	87.500	ENSSFOG00015018940	-	85	87.500	Scleropages_formosus
ENSLBEG00000028494	si:dkey-19e4.5	98	86.550	ENSSFOG00015015536	-	100	84.239	Scleropages_formosus
ENSLBEG00000028494	si:dkey-19e4.5	100	96.196	ENSSMAG00000004082	si:dkey-19e4.5	100	96.196	Scophthalmus_maximus
ENSLBEG00000028494	si:dkey-19e4.5	100	96.196	ENSSDUG00000008513	si:dkey-19e4.5	100	96.196	Seriola_dumerili
ENSLBEG00000028494	si:dkey-19e4.5	99	81.818	ENSSLDG00000017403	si:dkey-19e4.5	99	81.818	Seriola_lalandi_dorsalis
ENSLBEG00000028494	si:dkey-19e4.5	78	64.964	ENSSPUG00000009492	-	89	64.964	Sphenodon_punctatus
ENSLBEG00000028494	si:dkey-19e4.5	100	97.283	ENSSPAG00000008798	si:dkey-19e4.5	100	97.283	Stegastes_partitus
ENSLBEG00000028494	si:dkey-19e4.5	98	89.474	ENSTRUG00000020025	si:dkey-19e4.5	100	86.413	Takifugu_rubripes
ENSLBEG00000028494	si:dkey-19e4.5	100	90.217	ENSXCOG00000002547	si:dkey-19e4.5	100	90.217	Xiphophorus_couchianus
ENSLBEG00000028494	si:dkey-19e4.5	100	90.217	ENSXMAG00000025389	si:dkey-19e4.5	100	90.217	Xiphophorus_maculatus