EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000028538 (Gene tree)
Gene ID: 109979581
Gene Symbol: -
Alias: -
Full Name: DNA-directed RNA polymerase II subunit RPB9-like
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 3375 bases
Position: chrFKLU01009060.1:1786-5160
Accession: 109979581
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038284	RNA_POL_M_15KD	PF02150.16	1.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039856	-	270	XM_020628397	ENSLBEP00000038284	89 (aa)	XP_020484053	-

Gene Model

Click here to download ENSLBEG00000028538's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028538's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000028538	-	100	100.000	ENSLBEG00000001220	polr2i	71	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028538	-	94	98.810	ENSG00000105258	POLR2I	95	98.810	Homo_sapiens
ENSLBEG00000028538	-	100	96.629	ENSAPOG00000012409	polr2i	71	96.629	Acanthochromis_polyacanthus
ENSLBEG00000028538	-	94	98.810	ENSAMEG00000000993	POLR2I	67	98.810	Ailuropoda_melanoleuca
ENSLBEG00000028538	-	100	96.629	ENSAOCG00000024378	polr2i	71	96.629	Amphiprion_ocellaris
ENSLBEG00000028538	-	100	96.629	ENSAPEG00000021748	polr2i	71	96.629	Amphiprion_percula
ENSLBEG00000028538	-	100	96.629	ENSATEG00000000758	polr2i	71	96.629	Anabas_testudineus
ENSLBEG00000028538	-	94	98.810	ENSANAG00000035318	POLR2I	67	98.810	Aotus_nancymaae
ENSLBEG00000028538	-	100	97.753	ENSACLG00000001663	polr2i	71	97.753	Astatotilapia_calliptera
ENSLBEG00000028538	-	100	100.000	ENSAMXG00000030198	polr2i	71	100.000	Astyanax_mexicanus
ENSLBEG00000028538	-	94	98.810	ENSBTAG00000015002	POLR2I	67	98.810	Bos_taurus
ENSLBEG00000028538	-	93	66.265	WBGene00022400	rpb-9	50	66.265	Caenorhabditis_elegans
ENSLBEG00000028538	-	94	98.810	ENSCJAG00000009671	POLR2I	67	98.810	Callithrix_jacchus
ENSLBEG00000028538	-	94	98.810	ENSCAFG00000006601	POLR2I	67	98.810	Canis_familiaris
ENSLBEG00000028538	-	94	98.810	ENSCAFG00020018113	POLR2I	67	98.810	Canis_lupus_dingo
ENSLBEG00000028538	-	94	98.810	ENSCHIG00000011961	POLR2I	67	98.810	Capra_hircus
ENSLBEG00000028538	-	94	98.810	ENSTSYG00000028318	-	67	98.810	Carlito_syrichta
ENSLBEG00000028538	-	74	72.727	ENSTSYG00000031752	-	59	72.727	Carlito_syrichta
ENSLBEG00000028538	-	94	98.810	ENSCPOG00000012097	POLR2I	67	98.810	Cavia_porcellus
ENSLBEG00000028538	-	94	98.810	ENSCCAG00000022138	-	67	98.810	Cebus_capucinus
ENSLBEG00000028538	-	94	96.429	ENSCCAG00000032214	-	67	96.429	Cebus_capucinus
ENSLBEG00000028538	-	94	98.810	ENSCATG00000017413	POLR2I	67	98.810	Cercocebus_atys
ENSLBEG00000028538	-	94	98.810	ENSCLAG00000011800	POLR2I	67	98.810	Chinchilla_lanigera
ENSLBEG00000028538	-	94	98.810	ENSCSAG00000004254	POLR2I	67	98.810	Chlorocebus_sabaeus
ENSLBEG00000028538	-	94	98.810	ENSCPBG00000006726	POLR2I	67	98.810	Chrysemys_picta_bellii
ENSLBEG00000028538	-	90	85.000	ENSCSAVG00000010630	-	63	85.000	Ciona_savignyi
ENSLBEG00000028538	-	94	98.810	ENSCANG00000031951	POLR2I	80	98.810	Colobus_angolensis_palliatus
ENSLBEG00000028538	-	100	93.258	ENSCSEG00000002213	polr2i	71	93.258	Cynoglossus_semilaevis
ENSLBEG00000028538	-	100	93.258	ENSCVAG00000014797	polr2i	71	93.258	Cyprinodon_variegatus
ENSLBEG00000028538	-	100	96.629	ENSDARG00000040443	polr2i	71	96.629	Danio_rerio
ENSLBEG00000028538	-	94	98.810	ENSDNOG00000015842	POLR2I	67	98.810	Dasypus_novemcinctus
ENSLBEG00000028538	-	74	72.727	ENSDORG00000028026	-	64	72.727	Dipodomys_ordii
ENSLBEG00000028538	-	94	98.810	ENSDORG00000001852	-	67	98.810	Dipodomys_ordii
ENSLBEG00000028538	-	92	75.610	ENSDORG00000029259	-	66	75.610	Dipodomys_ordii
ENSLBEG00000028538	-	89	73.418	ENSDORG00000028728	-	65	73.418	Dipodomys_ordii
ENSLBEG00000028538	-	90	85.000	FBgn0004855	RpII15	62	85.000	Drosophila_melanogaster
ENSLBEG00000028538	-	94	98.810	ENSETEG00000012679	POLR2I	67	98.810	Echinops_telfairi
ENSLBEG00000028538	-	100	88.889	ENSEBUG00000007333	polr2i	71	88.889	Eptatretus_burgeri
ENSLBEG00000028538	-	94	98.810	ENSEASG00005002231	POLR2I	67	98.810	Equus_asinus_asinus
ENSLBEG00000028538	-	94	98.810	ENSECAG00000013654	POLR2I	67	98.810	Equus_caballus
ENSLBEG00000028538	-	94	98.810	ENSEEUG00000002113	POLR2I	67	98.810	Erinaceus_europaeus
ENSLBEG00000028538	-	100	97.753	ENSELUG00000018012	polr2i	71	97.753	Esox_lucius
ENSLBEG00000028538	-	94	98.810	ENSFCAG00000026052	POLR2I	67	98.810	Felis_catus
ENSLBEG00000028538	-	72	93.750	ENSFALG00000006198	POLR2I	100	93.750	Ficedula_albicollis
ENSLBEG00000028538	-	94	98.810	ENSFDAG00000011350	POLR2I	67	98.810	Fukomys_damarensis
ENSLBEG00000028538	-	100	94.382	ENSFHEG00000015659	polr2i	71	94.382	Fundulus_heteroclitus
ENSLBEG00000028538	-	100	97.753	ENSGMOG00000013806	polr2i	71	97.753	Gadus_morhua
ENSLBEG00000028538	-	94	92.857	ENSGALG00000038595	POLR2I	65	92.857	Gallus_gallus
ENSLBEG00000028538	-	100	97.753	ENSGAFG00000001037	polr2i	71	97.753	Gambusia_affinis
ENSLBEG00000028538	-	100	98.876	ENSGACG00000006679	polr2i	71	98.876	Gasterosteus_aculeatus
ENSLBEG00000028538	-	94	98.810	ENSGAGG00000015806	POLR2I	67	98.810	Gopherus_agassizii
ENSLBEG00000028538	-	94	98.810	ENSGGOG00000015426	POLR2I	67	98.810	Gorilla_gorilla
ENSLBEG00000028538	-	100	96.629	ENSHBUG00000004140	polr2i	71	96.629	Haplochromis_burtoni
ENSLBEG00000028538	-	74	98.485	ENSHGLG00000007388	POLR2I	64	98.485	Heterocephalus_glaber_female
ENSLBEG00000028538	-	74	98.485	ENSHGLG00100014515	POLR2I	64	98.485	Heterocephalus_glaber_male
ENSLBEG00000028538	-	100	100.000	ENSHCOG00000010967	polr2i	71	100.000	Hippocampus_comes
ENSLBEG00000028538	-	100	96.629	ENSIPUG00000001127	polr2i	71	96.629	Ictalurus_punctatus
ENSLBEG00000028538	-	94	98.810	ENSSTOG00000009411	POLR2I	67	98.810	Ictidomys_tridecemlineatus
ENSLBEG00000028538	-	94	98.810	ENSJJAG00000014400	Polr2i	67	98.810	Jaculus_jaculus
ENSLBEG00000028538	-	100	96.629	ENSKMAG00000001567	polr2i	71	96.629	Kryptolebias_marmoratus
ENSLBEG00000028538	-	92	98.780	ENSLACG00000009590	POLR2I	66	98.780	Latimeria_chalumnae
ENSLBEG00000028538	-	100	98.876	ENSLOCG00000014818	polr2i	71	98.876	Lepisosteus_oculatus
ENSLBEG00000028538	-	94	98.810	ENSLAFG00000015527	POLR2I	67	98.810	Loxodonta_africana
ENSLBEG00000028538	-	94	98.810	ENSMFAG00000039443	POLR2I	67	98.810	Macaca_fascicularis
ENSLBEG00000028538	-	74	98.485	ENSMMUG00000000522	POLR2I	64	98.485	Macaca_mulatta
ENSLBEG00000028538	-	94	97.619	ENSMNEG00000029421	POLR2I	67	97.619	Macaca_nemestrina
ENSLBEG00000028538	-	94	98.810	ENSMLEG00000039720	POLR2I	67	98.810	Mandrillus_leucophaeus
ENSLBEG00000028538	-	100	95.506	ENSMAMG00000013970	polr2i	71	95.506	Mastacembelus_armatus
ENSLBEG00000028538	-	100	97.753	ENSMZEG00005013082	polr2i	71	97.753	Maylandia_zebra
ENSLBEG00000028538	-	94	92.857	ENSMGAG00000008576	POLR2I	67	92.857	Meleagris_gallopavo
ENSLBEG00000028538	-	94	98.810	ENSMAUG00000001001	Polr2i	67	98.810	Mesocricetus_auratus
ENSLBEG00000028538	-	94	98.810	ENSMICG00000010241	POLR2I	67	98.810	Microcebus_murinus
ENSLBEG00000028538	-	94	98.810	ENSMOCG00000011984	Polr2i	67	98.810	Microtus_ochrogaster
ENSLBEG00000028538	-	74	100.000	ENSMMOG00000004945	polr2i	64	100.000	Mola_mola
ENSLBEG00000028538	-	94	98.810	ENSMODG00000014172	POLR2I	67	98.810	Monodelphis_domestica
ENSLBEG00000028538	-	94	98.810	MGP_CAROLIEiJ_G0029507	Polr2i	67	98.810	Mus_caroli
ENSLBEG00000028538	-	94	98.810	ENSMUSG00000019738	Polr2i	80	98.485	Mus_musculus
ENSLBEG00000028538	-	94	98.810	MGP_PahariEiJ_G0012741	Polr2i	80	98.485	Mus_pahari
ENSLBEG00000028538	-	94	98.810	MGP_SPRETEiJ_G0030603	Polr2i	67	98.810	Mus_spretus
ENSLBEG00000028538	-	94	98.810	ENSMPUG00000005702	POLR2I	67	98.810	Mustela_putorius_furo
ENSLBEG00000028538	-	94	98.810	ENSMLUG00000012317	POLR2I	67	98.810	Myotis_lucifugus
ENSLBEG00000028538	-	94	98.810	ENSNGAG00000014966	Polr2i	67	98.810	Nannospalax_galili
ENSLBEG00000028538	-	100	96.629	ENSNBRG00000000723	polr2i	71	96.629	Neolamprologus_brichardi
ENSLBEG00000028538	-	94	98.810	ENSNLEG00000011691	POLR2I	67	98.810	Nomascus_leucogenys
ENSLBEG00000028538	-	94	98.810	ENSOPRG00000001789	-	67	98.810	Ochotona_princeps
ENSLBEG00000028538	-	94	98.810	ENSOPRG00000008681	-	67	98.810	Ochotona_princeps
ENSLBEG00000028538	-	89	79.747	ENSODEG00000017901	-	58	79.747	Octodon_degus
ENSLBEG00000028538	-	94	98.810	ENSODEG00000015015	-	67	98.810	Octodon_degus
ENSLBEG00000028538	-	100	97.753	ENSONIG00000005397	polr2i	71	97.753	Oreochromis_niloticus
ENSLBEG00000028538	-	94	98.810	ENSOCUG00000013044	POLR2I	67	98.810	Oryctolagus_cuniculus
ENSLBEG00000028538	-	94	97.619	ENSOCUG00000024998	-	67	97.619	Oryctolagus_cuniculus
ENSLBEG00000028538	-	100	94.382	ENSORLG00000013308	polr2i	71	94.382	Oryzias_latipes
ENSLBEG00000028538	-	100	95.506	ENSORLG00020011281	polr2i	71	95.506	Oryzias_latipes_hni
ENSLBEG00000028538	-	100	95.506	ENSORLG00015019529	polr2i	71	95.506	Oryzias_latipes_hsok
ENSLBEG00000028538	-	100	95.506	ENSOMEG00000012586	polr2i	71	95.506	Oryzias_melastigma
ENSLBEG00000028538	-	94	98.810	ENSOGAG00000024254	POLR2I	67	98.810	Otolemur_garnettii
ENSLBEG00000028538	-	94	98.810	ENSOARG00000005266	POLR2I	67	98.810	Ovis_aries
ENSLBEG00000028538	-	94	98.810	ENSPPAG00000033446	POLR2I	67	98.810	Pan_paniscus
ENSLBEG00000028538	-	94	98.810	ENSPPRG00000007194	POLR2I	67	98.810	Panthera_pardus
ENSLBEG00000028538	-	94	98.810	ENSPTIG00000018661	POLR2I	67	98.810	Panthera_tigris_altaica
ENSLBEG00000028538	-	94	98.810	ENSPTRG00000010885	POLR2I	67	98.810	Pan_troglodytes
ENSLBEG00000028538	-	94	98.810	ENSPANG00000004508	POLR2I	67	98.810	Papio_anubis
ENSLBEG00000028538	-	100	97.753	ENSPKIG00000001086	polr2i	71	97.753	Paramormyrops_kingsleyae
ENSLBEG00000028538	-	74	98.485	ENSPSIG00000011560	POLR2I	64	98.485	Pelodiscus_sinensis
ENSLBEG00000028538	-	100	92.473	ENSPMGG00000016154	polr2i	72	92.473	Periophthalmus_magnuspinnatus
ENSLBEG00000028538	-	94	98.810	ENSPEMG00000014212	Polr2i	67	98.810	Peromyscus_maniculatus_bairdii
ENSLBEG00000028538	-	94	98.810	ENSPCIG00000015436	-	67	98.810	Phascolarctos_cinereus
ENSLBEG00000028538	-	100	97.753	ENSPFOG00000016816	polr2i	71	97.753	Poecilia_formosa
ENSLBEG00000028538	-	100	97.753	ENSPLAG00000010639	polr2i	71	97.753	Poecilia_latipinna
ENSLBEG00000028538	-	100	97.753	ENSPMEG00000005956	polr2i	71	97.753	Poecilia_mexicana
ENSLBEG00000028538	-	100	97.753	ENSPREG00000004227	polr2i	71	97.753	Poecilia_reticulata
ENSLBEG00000028538	-	94	98.810	ENSPPYG00000009897	POLR2I	67	98.810	Pongo_abelii
ENSLBEG00000028538	-	94	98.810	ENSPCAG00000003494	POLR2I	67	98.810	Procavia_capensis
ENSLBEG00000028538	-	94	98.810	ENSPCOG00000018643	POLR2I	67	98.810	Propithecus_coquereli
ENSLBEG00000028538	-	94	98.810	ENSPVAG00000012883	POLR2I	67	98.810	Pteropus_vampyrus
ENSLBEG00000028538	-	100	97.753	ENSPNYG00000011908	polr2i	71	97.753	Pundamilia_nyererei
ENSLBEG00000028538	-	100	98.876	ENSPNAG00000005859	polr2i	71	98.876	Pygocentrus_nattereri
ENSLBEG00000028538	-	94	98.810	ENSRNOG00000020799	LOC103690054	67	98.810	Rattus_norvegicus
ENSLBEG00000028538	-	94	98.810	ENSRNOG00000050560	Polr2i	67	98.810	Rattus_norvegicus
ENSLBEG00000028538	-	94	98.810	ENSRBIG00000037225	POLR2I	67	98.810	Rhinopithecus_bieti
ENSLBEG00000028538	-	94	98.810	ENSRROG00000042843	POLR2I	67	98.810	Rhinopithecus_roxellana
ENSLBEG00000028538	-	84	48.000	YGL070C	RPB9	61	48.000	Saccharomyces_cerevisiae
ENSLBEG00000028538	-	94	98.810	ENSSBOG00000030799	-	67	98.810	Saimiri_boliviensis_boliviensis
ENSLBEG00000028538	-	100	98.876	ENSSFOG00015022523	polr2i	71	98.876	Scleropages_formosus
ENSLBEG00000028538	-	100	98.876	ENSSMAG00000003335	polr2i	71	98.876	Scophthalmus_maximus
ENSLBEG00000028538	-	100	96.629	ENSSDUG00000005483	polr2i	71	96.629	Seriola_dumerili
ENSLBEG00000028538	-	100	96.629	ENSSLDG00000009341	polr2i	71	96.629	Seriola_lalandi_dorsalis
ENSLBEG00000028538	-	94	98.810	ENSSARG00000009331	POLR2I	67	98.810	Sorex_araneus
ENSLBEG00000028538	-	94	97.619	ENSSPUG00000012658	POLR2I	67	97.619	Sphenodon_punctatus
ENSLBEG00000028538	-	100	97.753	ENSSPAG00000015734	polr2i	71	97.753	Stegastes_partitus
ENSLBEG00000028538	-	94	98.810	ENSSSCG00000039196	POLR2I	67	98.810	Sus_scrofa
ENSLBEG00000028538	-	100	100.000	ENSTRUG00000022235	polr2i	71	100.000	Takifugu_rubripes
ENSLBEG00000028538	-	100	100.000	ENSTNIG00000011737	polr2i	71	100.000	Tetraodon_nigroviridis
ENSLBEG00000028538	-	94	98.810	ENSTTRG00000003919	POLR2I	67	98.810	Tursiops_truncatus
ENSLBEG00000028538	-	94	98.810	ENSUAMG00000020575	POLR2I	67	98.810	Ursus_americanus
ENSLBEG00000028538	-	94	98.810	ENSUMAG00000020809	POLR2I	70	98.810	Ursus_maritimus
ENSLBEG00000028538	-	94	98.810	ENSVVUG00000013588	POLR2I	67	98.810	Vulpes_vulpes
ENSLBEG00000028538	-	100	97.753	ENSXCOG00000001119	polr2i	71	97.753	Xiphophorus_couchianus
ENSLBEG00000028538	-	100	97.753	ENSXMAG00000021278	polr2i	71	97.753	Xiphophorus_maculatus