EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000028618 (Gene tree)
Gene ID: 109987650
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3055 bases
Position: chrFKLU01000121.1:144635-147689
Accession: 109987650
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038398	MRP-S32	PF10210.9	1.7e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000039974	-	1127	XM_020638806	ENSLBEP00000038398	147 (aa)	XP_020494462	UPI0009B4E742

Gene Model

Click here to download ENSLBEG00000028618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028618's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028618	mrpl42	99	77.397	ENSAPOG00000010677	mrpl42	100	77.397	Acanthochromis_polyacanthus
ENSLBEG00000028618	mrpl42	99	79.310	ENSAOCG00000011620	mrpl42	100	79.310	Amphiprion_ocellaris
ENSLBEG00000028618	mrpl42	99	79.310	ENSAPEG00000019516	mrpl42	100	79.310	Amphiprion_percula
ENSLBEG00000028618	mrpl42	89	81.679	ENSATEG00000014106	mrpl42	100	81.679	Anabas_testudineus
ENSLBEG00000028618	mrpl42	67	74.747	ENSACAG00000012606	MRPL42	68	74.747	Anolis_carolinensis
ENSLBEG00000028618	mrpl42	99	69.655	ENSACLG00000026856	mrpl42	100	69.655	Astatotilapia_calliptera
ENSLBEG00000028618	mrpl42	93	47.143	ENSAMXG00000035149	mrpl42	94	47.143	Astyanax_mexicanus
ENSLBEG00000028618	mrpl42	99	65.517	ENSCSEG00000010067	mrpl42	99	65.517	Cynoglossus_semilaevis
ENSLBEG00000028618	mrpl42	99	71.034	ENSCVAG00000002612	mrpl42	100	71.034	Cyprinodon_variegatus
ENSLBEG00000028618	mrpl42	99	54.483	ENSDARG00000079391	mrpl42	100	54.483	Danio_rerio
ENSLBEG00000028618	mrpl42	67	50.476	ENSEBUG00000005581	mrpl42	78	50.476	Eptatretus_burgeri
ENSLBEG00000028618	mrpl42	98	69.444	ENSELUG00000001973	mrpl42	99	69.444	Esox_lucius
ENSLBEG00000028618	mrpl42	99	68.276	ENSFHEG00000018696	mrpl42	100	68.276	Fundulus_heteroclitus
ENSLBEG00000028618	mrpl42	65	78.125	ENSGMOG00000002972	mrpl42	99	78.125	Gadus_morhua
ENSLBEG00000028618	mrpl42	99	70.345	ENSGAFG00000018373	mrpl42	100	70.345	Gambusia_affinis
ENSLBEG00000028618	mrpl42	66	82.474	ENSGACG00000018811	mrpl42	100	82.474	Gasterosteus_aculeatus
ENSLBEG00000028618	mrpl42	99	70.345	ENSHBUG00000015960	mrpl42	100	70.345	Haplochromis_burtoni
ENSLBEG00000028618	mrpl42	99	62.329	ENSHCOG00000014046	mrpl42	100	62.329	Hippocampus_comes
ENSLBEG00000028618	mrpl42	67	63.636	ENSIPUG00000015395	mrpl42	67	63.636	Ictalurus_punctatus
ENSLBEG00000028618	mrpl42	99	69.655	ENSKMAG00000013671	mrpl42	100	69.655	Kryptolebias_marmoratus
ENSLBEG00000028618	mrpl42	99	74.483	ENSMAMG00000009737	mrpl42	100	74.483	Mastacembelus_armatus
ENSLBEG00000028618	mrpl42	99	69.655	ENSMZEG00005008545	mrpl42	96	69.655	Maylandia_zebra
ENSLBEG00000028618	mrpl42	71	75.000	ENSMMOG00000002317	mrpl42	68	75.000	Mola_mola
ENSLBEG00000028618	mrpl42	100	69.427	ENSMALG00000015794	mrpl42	98	69.427	Monopterus_albus
ENSLBEG00000028618	mrpl42	99	68.966	ENSNBRG00000003307	mrpl42	100	68.966	Neolamprologus_brichardi
ENSLBEG00000028618	mrpl42	99	69.655	ENSONIG00000011753	mrpl42	100	69.655	Oreochromis_niloticus
ENSLBEG00000028618	mrpl42	76	59.821	ENSOANG00000019984	-	76	59.821	Ornithorhynchus_anatinus
ENSLBEG00000028618	mrpl42	99	67.808	ENSORLG00000013500	mrpl42	86	66.892	Oryzias_latipes
ENSLBEG00000028618	mrpl42	99	70.548	ENSORLG00020000548	mrpl42	100	70.548	Oryzias_latipes_hni
ENSLBEG00000028618	mrpl42	99	68.276	ENSORLG00015016984	mrpl42	100	68.276	Oryzias_latipes_hsok
ENSLBEG00000028618	mrpl42	99	70.345	ENSOMEG00000010700	mrpl42	100	70.345	Oryzias_melastigma
ENSLBEG00000028618	mrpl42	99	63.014	ENSPKIG00000025457	mrpl42	100	63.014	Paramormyrops_kingsleyae
ENSLBEG00000028618	mrpl42	97	58.333	ENSPMGG00000019705	mrpl42	91	58.333	Periophthalmus_magnuspinnatus
ENSLBEG00000028618	mrpl42	97	45.223	ENSPMAG00000008091	mrpl42	100	45.223	Petromyzon_marinus
ENSLBEG00000028618	mrpl42	99	69.863	ENSPFOG00000016539	mrpl42	99	69.863	Poecilia_formosa
ENSLBEG00000028618	mrpl42	99	69.655	ENSPLAG00000001255	mrpl42	100	69.655	Poecilia_latipinna
ENSLBEG00000028618	mrpl42	99	69.655	ENSPMEG00000016462	mrpl42	100	69.655	Poecilia_mexicana
ENSLBEG00000028618	mrpl42	93	61.765	ENSPREG00000012053	mrpl42	100	61.765	Poecilia_reticulata
ENSLBEG00000028618	mrpl42	99	69.655	ENSPNYG00000009586	mrpl42	100	69.655	Pundamilia_nyererei
ENSLBEG00000028618	mrpl42	97	53.521	ENSPNAG00000020753	mrpl42	97	53.521	Pygocentrus_nattereri
ENSLBEG00000028618	mrpl42	99	77.241	ENSSMAG00000000262	mrpl42	100	77.241	Scophthalmus_maximus
ENSLBEG00000028618	mrpl42	99	78.621	ENSSDUG00000005949	mrpl42	100	78.621	Seriola_dumerili
ENSLBEG00000028618	mrpl42	99	76.552	ENSSLDG00000010159	mrpl42	100	76.552	Seriola_lalandi_dorsalis
ENSLBEG00000028618	mrpl42	99	71.233	ENSTRUG00000025949	mrpl42	99	71.233	Takifugu_rubripes
ENSLBEG00000028618	mrpl42	78	60.000	ENSXETG00000032902	mrpl42	92	60.000	Xenopus_tropicalis
ENSLBEG00000028618	mrpl42	99	63.514	ENSXCOG00000013875	mrpl42	99	63.514	Xiphophorus_couchianus