EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000028712 (Gene tree)
Gene ID: -
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 3551 bases
Position: chrFKLU01000238.1:577543-581093
Accession: ZDB-GENE-060825-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038506	MTS	PF05175.14	1.7e-05	1	1
ENSLBEP00000038506	Met_10	PF02475.16	6.4e-25	1	1
ENSLBEP00000038505	Met_10	PF02475.16	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000040098	-	1814	-	ENSLBEP00000038505	369 (aa)	-	-
ENSLBET00000040099	-	1170	-	ENSLBEP00000038506	389 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000028712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000028712	trmt12	55	100.000	ENSLBEG00000017456	-	87	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028712	trmt12	96	47.952	ENSG00000183665	TRMT12	92	47.952	Homo_sapiens
ENSLBEG00000028712	trmt12	100	72.414	ENSAPOG00000011979	trmt12	100	72.414	Acanthochromis_polyacanthus
ENSLBEG00000028712	trmt12	96	48.916	ENSAMEG00000019612	TRMT12	92	48.916	Ailuropoda_melanoleuca
ENSLBEG00000028712	trmt12	95	69.430	ENSACIG00000012982	trmt12	100	69.430	Amphilophus_citrinellus
ENSLBEG00000028712	trmt12	100	71.642	ENSAOCG00000020570	trmt12	99	72.917	Amphiprion_ocellaris
ENSLBEG00000028712	trmt12	100	72.388	ENSAPEG00000006335	trmt12	99	73.438	Amphiprion_percula
ENSLBEG00000028712	trmt12	100	72.167	ENSATEG00000018316	trmt12	100	72.167	Anabas_testudineus
ENSLBEG00000028712	trmt12	100	69.212	ENSACLG00000001008	trmt12	100	69.212	Astatotilapia_calliptera
ENSLBEG00000028712	trmt12	99	57.381	ENSAMXG00000040366	trmt12	99	57.381	Astyanax_mexicanus
ENSLBEG00000028712	trmt12	96	49.034	ENSBTAG00000020398	TRMT12	89	49.034	Bos_taurus
ENSLBEG00000028712	trmt12	96	46.747	ENSCJAG00000022174	TRMT12	92	46.747	Callithrix_jacchus
ENSLBEG00000028712	trmt12	96	46.731	ENSCAFG00000001040	TRMT12	94	46.731	Canis_familiaris
ENSLBEG00000028712	trmt12	96	46.731	ENSCAFG00020006500	TRMT12	94	46.731	Canis_lupus_dingo
ENSLBEG00000028712	trmt12	96	48.668	ENSCHIG00000016574	TRMT12	94	48.668	Capra_hircus
ENSLBEG00000028712	trmt12	96	48.905	ENSCPOG00000026520	TRMT12	93	48.905	Cavia_porcellus
ENSLBEG00000028712	trmt12	96	47.700	ENSCSAG00000018615	TRMT12	92	47.700	Chlorocebus_sabaeus
ENSLBEG00000028712	trmt12	96	50.118	ENSCPBG00000014290	TRMT12	93	50.118	Chrysemys_picta_bellii
ENSLBEG00000028712	trmt12	72	45.791	ENSCING00000019633	-	97	45.791	Ciona_intestinalis
ENSLBEG00000028712	trmt12	74	46.102	ENSCSAVG00000000415	-	92	46.102	Ciona_savignyi
ENSLBEG00000028712	trmt12	96	42.394	ENSCGRG00001014834	Trmt12	95	48.379	Cricetulus_griseus_chok1gshd
ENSLBEG00000028712	trmt12	99	64.964	ENSCSEG00000002675	trmt12	95	64.964	Cynoglossus_semilaevis
ENSLBEG00000028712	trmt12	100	65.432	ENSCVAG00000005590	trmt12	100	65.679	Cyprinodon_variegatus
ENSLBEG00000028712	trmt12	99	55.854	ENSDARG00000060338	trmt12	99	55.854	Danio_rerio
ENSLBEG00000028712	trmt12	96	47.700	ENSETEG00000009373	TRMT12	92	47.700	Echinops_telfairi
ENSLBEG00000028712	trmt12	96	48.426	ENSEASG00005022441	TRMT12	94	48.426	Equus_asinus_asinus
ENSLBEG00000028712	trmt12	96	47.458	ENSEEUG00000004844	TRMT12	93	47.458	Erinaceus_europaeus
ENSLBEG00000028712	trmt12	99	59.852	ENSELUG00000004240	trmt12	99	60.160	Esox_lucius
ENSLBEG00000028712	trmt12	66	56.098	ENSFALG00000003825	TRMT12	93	63.725	Ficedula_albicollis
ENSLBEG00000028712	trmt12	96	48.184	ENSFDAG00000016647	TRMT12	94	48.184	Fukomys_damarensis
ENSLBEG00000028712	trmt12	93	58.090	ENSFHEG00000017338	trmt12	96	58.090	Fundulus_heteroclitus
ENSLBEG00000028712	trmt12	89	53.908	ENSGALG00000006773	TRMT12	81	53.908	Gallus_gallus
ENSLBEG00000028712	trmt12	100	65.686	ENSGAFG00000020056	trmt12	100	65.686	Gambusia_affinis
ENSLBEG00000028712	trmt12	95	67.010	ENSGACG00000017351	trmt12	99	67.010	Gasterosteus_aculeatus
ENSLBEG00000028712	trmt12	96	51.064	ENSGAGG00000006032	TRMT12	95	51.064	Gopherus_agassizii
ENSLBEG00000028712	trmt12	100	68.966	ENSHBUG00000016412	trmt12	100	68.966	Haplochromis_burtoni
ENSLBEG00000028712	trmt12	96	47.700	ENSHGLG00000020498	TRMT12	94	47.700	Heterocephalus_glaber_female
ENSLBEG00000028712	trmt12	96	47.700	ENSHGLG00100020132	TRMT12	94	47.700	Heterocephalus_glaber_male
ENSLBEG00000028712	trmt12	100	69.444	ENSHCOG00000005050	trmt12	98	71.765	Hippocampus_comes
ENSLBEG00000028712	trmt12	100	57.457	ENSIPUG00000018011	trmt12	92	57.457	Ictalurus_punctatus
ENSLBEG00000028712	trmt12	96	48.068	ENSSTOG00000030617	TRMT12	94	48.068	Ictidomys_tridecemlineatus
ENSLBEG00000028712	trmt12	99	68.395	ENSKMAG00000000891	trmt12	99	68.395	Kryptolebias_marmoratus
ENSLBEG00000028712	trmt12	98	48.936	ENSLACG00000015869	TRMT12	94	48.936	Latimeria_chalumnae
ENSLBEG00000028712	trmt12	99	52.195	ENSLOCG00000015290	trmt12	99	52.195	Lepisosteus_oculatus
ENSLBEG00000028712	trmt12	96	47.596	ENSLAFG00000012519	TRMT12	94	47.596	Loxodonta_africana
ENSLBEG00000028712	trmt12	96	47.215	ENSMMUG00000015490	TRMT12	93	47.215	Macaca_mulatta
ENSLBEG00000028712	trmt12	99	70.647	ENSMAMG00000020311	trmt12	99	70.647	Mastacembelus_armatus
ENSLBEG00000028712	trmt12	100	68.966	ENSMZEG00005007349	trmt12	100	68.966	Maylandia_zebra
ENSLBEG00000028712	trmt12	99	50.239	ENSMGAG00000004174	TRMT12	95	50.239	Meleagris_gallopavo
ENSLBEG00000028712	trmt12	99	70.750	ENSMMOG00000000412	trmt12	99	70.750	Mola_mola
ENSLBEG00000028712	trmt12	96	49.127	ENSMODG00000021403	-	92	49.127	Monodelphis_domestica
ENSLBEG00000028712	trmt12	98	46.929	ENSMODG00000011798	-	85	46.929	Monodelphis_domestica
ENSLBEG00000028712	trmt12	100	71.429	ENSMALG00000008668	trmt12	100	71.429	Monopterus_albus
ENSLBEG00000028712	trmt12	96	47.330	MGP_CAROLIEiJ_G0019820	Trmt12	93	47.330	Mus_caroli
ENSLBEG00000028712	trmt12	96	48.058	ENSMUSG00000037085	Trmt12	92	48.058	Mus_musculus
ENSLBEG00000028712	trmt12	96	48.544	MGP_PahariEiJ_G0019829	Trmt12	93	48.544	Mus_pahari
ENSLBEG00000028712	trmt12	96	47.573	MGP_SPRETEiJ_G0020717	Trmt12	92	47.573	Mus_spretus
ENSLBEG00000028712	trmt12	96	48.317	ENSMPUG00000019150	TRMT12	93	48.317	Mustela_putorius_furo
ENSLBEG00000028712	trmt12	96	48.910	ENSMLUG00000003753	TRMT12	94	48.910	Myotis_lucifugus
ENSLBEG00000028712	trmt12	96	46.860	ENSNGAG00000014548	Trmt12	95	46.860	Nannospalax_galili
ENSLBEG00000028712	trmt12	100	68.966	ENSNBRG00000021510	trmt12	100	68.966	Neolamprologus_brichardi
ENSLBEG00000028712	trmt12	96	45.278	ENSOPRG00000008067	TRMT12	92	45.278	Ochotona_princeps
ENSLBEG00000028712	trmt12	96	47.458	ENSODEG00000018933	TRMT12	94	47.458	Octodon_degus
ENSLBEG00000028712	trmt12	100	70.443	ENSONIG00000002614	trmt12	100	70.443	Oreochromis_niloticus
ENSLBEG00000028712	trmt12	96	43.489	ENSOANG00000009987	TRMT12	95	43.489	Ornithorhynchus_anatinus
ENSLBEG00000028712	trmt12	99	43.056	ENSOCUG00000026379	TRMT12	96	43.056	Oryctolagus_cuniculus
ENSLBEG00000028712	trmt12	100	66.915	ENSORLG00000001280	trmt12	100	66.915	Oryzias_latipes
ENSLBEG00000028712	trmt12	100	66.667	ENSORLG00020000708	trmt12	100	66.667	Oryzias_latipes_hni
ENSLBEG00000028712	trmt12	100	65.423	ENSORLG00015012344	trmt12	100	65.423	Oryzias_latipes_hsok
ENSLBEG00000028712	trmt12	100	65.174	ENSOMEG00000015267	trmt12	98	65.174	Oryzias_melastigma
ENSLBEG00000028712	trmt12	96	48.317	ENSOGAG00000015845	TRMT12	94	48.317	Otolemur_garnettii
ENSLBEG00000028712	trmt12	99	56.757	ENSPKIG00000004640	trmt12	99	57.398	Paramormyrops_kingsleyae
ENSLBEG00000028712	trmt12	60	57.621	ENSPSIG00000003476	TRMT12	99	57.621	Pelodiscus_sinensis
ENSLBEG00000028712	trmt12	99	62.438	ENSPMGG00000016356	trmt12	97	62.438	Periophthalmus_magnuspinnatus
ENSLBEG00000028712	trmt12	96	49.500	ENSPCIG00000002967	TRMT12	85	49.500	Phascolarctos_cinereus
ENSLBEG00000028712	trmt12	95	66.927	ENSPFOG00000016931	trmt12	94	66.927	Poecilia_formosa
ENSLBEG00000028712	trmt12	99	66.253	ENSPLAG00000020621	trmt12	99	66.253	Poecilia_latipinna
ENSLBEG00000028712	trmt12	99	66.337	ENSPMEG00000000818	trmt12	99	66.337	Poecilia_mexicana
ENSLBEG00000028712	trmt12	99	66.420	ENSPREG00000011621	trmt12	99	66.420	Poecilia_reticulata
ENSLBEG00000028712	trmt12	96	47.711	ENSPPYG00000018866	TRMT12	92	47.711	Pongo_abelii
ENSLBEG00000028712	trmt12	96	48.675	ENSPCAG00000000556	TRMT12	93	48.675	Procavia_capensis
ENSLBEG00000028712	trmt12	96	48.184	ENSPVAG00000009149	TRMT12	93	48.184	Pteropus_vampyrus
ENSLBEG00000028712	trmt12	95	69.430	ENSPNYG00000010696	trmt12	100	69.430	Pundamilia_nyererei
ENSLBEG00000028712	trmt12	99	56.429	ENSPNAG00000019028	trmt12	99	56.429	Pygocentrus_nattereri
ENSLBEG00000028712	trmt12	96	48.786	ENSRNOG00000008978	Trmt12	94	48.786	Rattus_norvegicus
ENSLBEG00000028712	trmt12	96	47.750	ENSSHAG00000003345	TRMT12	92	47.750	Sarcophilus_harrisii
ENSLBEG00000028712	trmt12	99	53.606	ENSSFOG00015006090	trmt12	99	53.606	Scleropages_formosus
ENSLBEG00000028712	trmt12	99	73.449	ENSSMAG00000013247	trmt12	99	73.449	Scophthalmus_maximus
ENSLBEG00000028712	trmt12	100	73.827	ENSSDUG00000006168	trmt12	100	73.827	Seriola_dumerili
ENSLBEG00000028712	trmt12	100	73.153	ENSSLDG00000025007	trmt12	100	73.153	Seriola_lalandi_dorsalis
ENSLBEG00000028712	trmt12	96	49.289	ENSSPUG00000005321	TRMT12	93	49.289	Sphenodon_punctatus
ENSLBEG00000028712	trmt12	100	72.167	ENSSPAG00000009435	trmt12	97	72.167	Stegastes_partitus
ENSLBEG00000028712	trmt12	75	55.272	ENSTGUG00000002280	TRMT12	99	47.330	Taeniopygia_guttata
ENSLBEG00000028712	trmt12	99	65.915	ENSTRUG00000011548	trmt12	99	65.915	Takifugu_rubripes
ENSLBEG00000028712	trmt12	99	62.745	ENSTNIG00000016866	trmt12	99	62.745	Tetraodon_nigroviridis
ENSLBEG00000028712	trmt12	96	48.193	ENSUAMG00000002067	TRMT12	95	48.193	Ursus_americanus
ENSLBEG00000028712	trmt12	96	48.184	ENSVPAG00000006519	TRMT12	93	48.184	Vicugna_pacos
ENSLBEG00000028712	trmt12	96	46.731	ENSVVUG00000016790	TRMT12	93	46.731	Vulpes_vulpes
ENSLBEG00000028712	trmt12	99	50.000	ENSXETG00000009641	trmt12	95	50.000	Xenopus_tropicalis
ENSLBEG00000028712	trmt12	100	64.234	ENSXCOG00000016505	trmt12	100	64.234	Xiphophorus_couchianus
ENSLBEG00000028712	trmt12	100	65.517	ENSXMAG00000025318	trmt12	100	65.517	Xiphophorus_maculatus