EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000028720 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 12335 bases
Position: chrFKLU01000238.1:661746-674080
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038516	RRM_1	PF00076.22	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000040110	-	906	-	ENSLBEP00000038516	302 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000028720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028720's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028720	cstf2	87	89.062	ENSG00000101811	CSTF2	54	94.915	Homo_sapiens
ENSLBEG00000028720	cstf2	100	96.203	ENSAPOG00000005630	cstf2	69	96.203	Acanthochromis_polyacanthus
ENSLBEG00000028720	cstf2	82	94.915	ENSAMEG00000002082	CSTF2	53	94.915	Ailuropoda_melanoleuca
ENSLBEG00000028720	cstf2	93	96.610	ENSACIG00000012852	cstf2	67	92.405	Amphilophus_citrinellus
ENSLBEG00000028720	cstf2	95	94.937	ENSAOCG00000020905	cstf2	69	94.937	Amphiprion_ocellaris
ENSLBEG00000028720	cstf2	95	94.937	ENSAPEG00000006526	cstf2	69	94.937	Amphiprion_percula
ENSLBEG00000028720	cstf2	89	96.667	ENSATEG00000018186	cstf2	69	94.937	Anabas_testudineus
ENSLBEG00000028720	cstf2	75	93.478	ENSAPLG00000007255	CSTF2	50	85.455	Anas_platyrhynchos
ENSLBEG00000028720	cstf2	87	89.062	ENSANAG00000022342	CSTF2	63	94.915	Aotus_nancymaae
ENSLBEG00000028720	cstf2	100	91.139	ENSACLG00000000779	cstf2	66	92.405	Astatotilapia_calliptera
ENSLBEG00000028720	cstf2	93	96.610	ENSAMXG00000021477	cstf2	51	65.746	Astyanax_mexicanus
ENSLBEG00000028720	cstf2	82	94.915	ENSBTAG00000003547	CSTF2	53	94.915	Bos_taurus
ENSLBEG00000028720	cstf2	85	94.915	ENSCJAG00000004422	CSTF2	54	94.915	Callithrix_jacchus
ENSLBEG00000028720	cstf2	83	89.062	ENSCAFG00000017551	CSTF2	54	94.915	Canis_familiaris
ENSLBEG00000028720	cstf2	83	89.062	ENSCAFG00020007619	CSTF2	52	94.915	Canis_lupus_dingo
ENSLBEG00000028720	cstf2	82	94.915	ENSCHIG00000016994	CSTF2	53	94.915	Capra_hircus
ENSLBEG00000028720	cstf2	87	89.062	ENSTSYG00000006529	CSTF2	54	94.915	Carlito_syrichta
ENSLBEG00000028720	cstf2	87	89.062	ENSCPOG00000015255	CSTF2	54	94.915	Cavia_porcellus
ENSLBEG00000028720	cstf2	87	89.062	ENSCCAG00000032975	CSTF2	63	94.915	Cebus_capucinus
ENSLBEG00000028720	cstf2	87	89.062	ENSCATG00000022835	CSTF2	56	94.915	Cercocebus_atys
ENSLBEG00000028720	cstf2	85	94.915	ENSCLAG00000001904	CSTF2	54	94.915	Chinchilla_lanigera
ENSLBEG00000028720	cstf2	76	89.062	ENSCSAG00000010360	CSTF2	52	94.915	Chlorocebus_sabaeus
ENSLBEG00000028720	cstf2	87	89.062	ENSCANG00000030612	CSTF2	56	94.915	Colobus_angolensis_palliatus
ENSLBEG00000028720	cstf2	85	94.915	ENSCGRG00001023023	Cstf2	54	94.915	Cricetulus_griseus_chok1gshd
ENSLBEG00000028720	cstf2	75	93.220	ENSCGRG00000003897	Cstf2	54	93.220	Cricetulus_griseus_crigri
ENSLBEG00000028720	cstf2	93	96.610	ENSCVAG00000005731	cstf2	68	93.671	Cyprinodon_variegatus
ENSLBEG00000028720	cstf2	83	89.062	ENSDORG00000007195	Cstf2	53	94.915	Dipodomys_ordii
ENSLBEG00000028720	cstf2	83	89.062	ENSEASG00005001216	CSTF2	52	94.915	Equus_asinus_asinus
ENSLBEG00000028720	cstf2	83	89.062	ENSECAG00000009325	CSTF2	54	94.915	Equus_caballus
ENSLBEG00000028720	cstf2	83	89.062	ENSFCAG00000007000	CSTF2	54	94.915	Felis_catus
ENSLBEG00000028720	cstf2	87	89.062	ENSFDAG00000002416	CSTF2	54	94.915	Fukomys_damarensis
ENSLBEG00000028720	cstf2	93	94.915	ENSFHEG00000017065	cstf2	66	92.405	Fundulus_heteroclitus
ENSLBEG00000028720	cstf2	78	96.667	ENSGMOG00000005145	cstf2	67	96.667	Gadus_morhua
ENSLBEG00000028720	cstf2	93	89.062	ENSGALG00000006760	CSTF2	63	94.915	Gallus_gallus
ENSLBEG00000028720	cstf2	87	96.610	ENSGAFG00000020027	cstf2	67	93.671	Gambusia_affinis
ENSLBEG00000028720	cstf2	86	95.161	ENSGACG00000017326	cstf2	60	95.000	Gasterosteus_aculeatus
ENSLBEG00000028720	cstf2	87	89.062	ENSGGOG00000022267	CSTF2	67	94.915	Gorilla_gorilla
ENSLBEG00000028720	cstf2	100	91.139	ENSHBUG00000016183	cstf2	66	92.405	Haplochromis_burtoni
ENSLBEG00000028720	cstf2	75	84.746	ENSHGLG00000013455	-	54	84.746	Heterocephalus_glaber_female
ENSLBEG00000028720	cstf2	87	89.062	ENSHGLG00000000659	-	54	94.915	Heterocephalus_glaber_female
ENSLBEG00000028720	cstf2	75	84.746	ENSHGLG00100015391	-	54	84.746	Heterocephalus_glaber_male
ENSLBEG00000028720	cstf2	87	89.062	ENSHGLG00100001130	-	54	94.915	Heterocephalus_glaber_male
ENSLBEG00000028720	cstf2	94	96.667	ENSHCOG00000005157	cstf2	67	96.667	Hippocampus_comes
ENSLBEG00000028720	cstf2	87	89.062	ENSSTOG00000023445	CSTF2	54	94.915	Ictidomys_tridecemlineatus
ENSLBEG00000028720	cstf2	75	94.915	ENSJJAG00000020507	Cstf2	54	94.915	Jaculus_jaculus
ENSLBEG00000028720	cstf2	95	91.139	ENSKMAG00000001068	cstf2	67	91.139	Kryptolebias_marmoratus
ENSLBEG00000028720	cstf2	76	90.625	ENSLACG00000015927	CSTF2	54	94.915	Latimeria_chalumnae
ENSLBEG00000028720	cstf2	82	94.915	ENSLAFG00000000474	CSTF2	54	94.915	Loxodonta_africana
ENSLBEG00000028720	cstf2	87	89.062	ENSMFAG00000043888	CSTF2	56	94.915	Macaca_fascicularis
ENSLBEG00000028720	cstf2	87	89.062	ENSMMUG00000013008	CSTF2	56	94.915	Macaca_mulatta
ENSLBEG00000028720	cstf2	87	89.062	ENSMNEG00000041824	CSTF2	56	94.915	Macaca_nemestrina
ENSLBEG00000028720	cstf2	87	89.062	ENSMLEG00000036870	CSTF2	56	94.915	Mandrillus_leucophaeus
ENSLBEG00000028720	cstf2	91	88.235	ENSMAMG00000020364	cstf2	65	88.235	Mastacembelus_armatus
ENSLBEG00000028720	cstf2	100	91.139	ENSMZEG00005007200	cstf2	69	92.405	Maylandia_zebra
ENSLBEG00000028720	cstf2	78	100.000	ENSMGAG00000004139	CSTF2	61	100.000	Meleagris_gallopavo
ENSLBEG00000028720	cstf2	82	94.915	ENSMAUG00000000965	Cstf2	54	94.915	Mesocricetus_auratus
ENSLBEG00000028720	cstf2	87	89.062	ENSMICG00000014121	CSTF2	53	94.915	Microcebus_murinus
ENSLBEG00000028720	cstf2	82	94.915	ENSMOCG00000008081	Cstf2	54	94.915	Microtus_ochrogaster
ENSLBEG00000028720	cstf2	76	98.305	ENSMMOG00000000538	cstf2	56	94.872	Mola_mola
ENSLBEG00000028720	cstf2	85	94.915	MGP_CAROLIEiJ_G0033383	Cstf2	56	94.915	Mus_caroli
ENSLBEG00000028720	cstf2	85	94.915	ENSMUSG00000031256	Cstf2	56	94.915	Mus_musculus
ENSLBEG00000028720	cstf2	85	94.915	MGP_PahariEiJ_G0031923	Cstf2	56	94.915	Mus_pahari
ENSLBEG00000028720	cstf2	85	94.915	MGP_SPRETEiJ_G0034548	Cstf2	56	94.915	Mus_spretus
ENSLBEG00000028720	cstf2	83	89.062	ENSMPUG00000002339	CSTF2	50	94.915	Mustela_putorius_furo
ENSLBEG00000028720	cstf2	85	94.915	ENSNGAG00000021985	Cstf2	54	94.915	Nannospalax_galili
ENSLBEG00000028720	cstf2	89	100.000	ENSNBRG00000021694	cstf2	65	100.000	Neolamprologus_brichardi
ENSLBEG00000028720	cstf2	87	89.062	ENSNLEG00000007510	CSTF2	56	94.915	Nomascus_leucogenys
ENSLBEG00000028720	cstf2	93	90.625	ENSMEUG00000011186	-	53	94.915	Notamacropus_eugenii
ENSLBEG00000028720	cstf2	75	90.625	ENSMEUG00000007875	-	53	94.915	Notamacropus_eugenii
ENSLBEG00000028720	cstf2	87	89.062	ENSODEG00000002059	CSTF2	54	94.915	Octodon_degus
ENSLBEG00000028720	cstf2	83	89.062	ENSOCUG00000010468	CSTF2	54	94.915	Oryctolagus_cuniculus
ENSLBEG00000028720	cstf2	89	94.915	ENSORLG00000001380	cstf2	65	93.333	Oryzias_latipes
ENSLBEG00000028720	cstf2	89	94.915	ENSORLG00020021917	cstf2	65	93.333	Oryzias_latipes_hni
ENSLBEG00000028720	cstf2	89	94.915	ENSORLG00015011996	cstf2	65	93.333	Oryzias_latipes_hsok
ENSLBEG00000028720	cstf2	89	93.333	ENSOMEG00000015507	cstf2	65	93.333	Oryzias_melastigma
ENSLBEG00000028720	cstf2	82	94.915	ENSOGAG00000011192	CSTF2	50	94.915	Otolemur_garnettii
ENSLBEG00000028720	cstf2	82	94.915	ENSOARG00000001022	CSTF2	53	94.915	Ovis_aries
ENSLBEG00000028720	cstf2	87	89.062	ENSPPAG00000031804	CSTF2	67	94.915	Pan_paniscus
ENSLBEG00000028720	cstf2	83	89.062	ENSPPRG00000022492	CSTF2	54	94.915	Panthera_pardus
ENSLBEG00000028720	cstf2	83	87.500	ENSPTIG00000009922	CSTF2	54	93.220	Panthera_tigris_altaica
ENSLBEG00000028720	cstf2	87	89.062	ENSPTRG00000022090	CSTF2	67	94.915	Pan_troglodytes
ENSLBEG00000028720	cstf2	87	89.062	ENSPANG00000002303	CSTF2	56	94.915	Papio_anubis
ENSLBEG00000028720	cstf2	89	87.324	ENSPKIG00000005033	cstf2	61	96.610	Paramormyrops_kingsleyae
ENSLBEG00000028720	cstf2	100	96.203	ENSPMGG00000006534	cstf2	69	96.203	Periophthalmus_magnuspinnatus
ENSLBEG00000028720	cstf2	82	94.915	ENSPEMG00000019415	Cstf2	54	94.915	Peromyscus_maniculatus_bairdii
ENSLBEG00000028720	cstf2	87	96.610	ENSPLAG00000011176	cstf2	68	93.671	Poecilia_latipinna
ENSLBEG00000028720	cstf2	87	96.610	ENSPMEG00000017743	cstf2	68	93.671	Poecilia_mexicana
ENSLBEG00000028720	cstf2	76	89.062	ENSPPYG00000020541	CSTF2	52	94.915	Pongo_abelii
ENSLBEG00000028720	cstf2	87	89.062	ENSPCOG00000027744	CSTF2	67	94.915	Propithecus_coquereli
ENSLBEG00000028720	cstf2	75	96.000	ENSPVAG00000008342	CSTF2	50	96.000	Pteropus_vampyrus
ENSLBEG00000028720	cstf2	100	91.139	ENSPNYG00000010852	cstf2	98	65.517	Pundamilia_nyererei
ENSLBEG00000028720	cstf2	85	94.915	ENSRNOG00000048025	Cstf2	54	94.915	Rattus_norvegicus
ENSLBEG00000028720	cstf2	87	89.062	ENSRBIG00000030745	CSTF2	55	94.915	Rhinopithecus_bieti
ENSLBEG00000028720	cstf2	87	89.062	ENSRROG00000045042	CSTF2	56	94.915	Rhinopithecus_roxellana
ENSLBEG00000028720	cstf2	87	89.062	ENSSBOG00000021649	CSTF2	63	94.915	Saimiri_boliviensis_boliviensis
ENSLBEG00000028720	cstf2	94	96.667	ENSSMAG00000013463	cstf2	65	96.667	Scophthalmus_maximus
ENSLBEG00000028720	cstf2	85	94.915	ENSSSCG00000012486	CSTF2	61	94.915	Sus_scrofa
ENSLBEG00000028720	cstf2	93	89.062	ENSTGUG00000002253	CSTF2	54	94.915	Taeniopygia_guttata
ENSLBEG00000028720	cstf2	95	89.231	ENSTNIG00000016860	cstf2	67	95.000	Tetraodon_nigroviridis
ENSLBEG00000028720	cstf2	83	89.062	ENSTTRG00000013556	CSTF2	54	94.915	Tursiops_truncatus
ENSLBEG00000028720	cstf2	82	94.915	ENSUAMG00000026605	CSTF2	54	94.915	Ursus_americanus
ENSLBEG00000028720	cstf2	83	87.500	ENSUMAG00000012417	CSTF2	51	93.220	Ursus_maritimus
ENSLBEG00000028720	cstf2	83	89.062	ENSVVUG00000004717	CSTF2	54	94.915	Vulpes_vulpes
ENSLBEG00000028720	cstf2	91	94.915	ENSXETG00000009642	cstf2	67	94.915	Xenopus_tropicalis
ENSLBEG00000028720	cstf2	85	96.610	ENSXCOG00000016436	cstf2	73	93.671	Xiphophorus_couchianus