EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000028724 (Gene tree)
Gene ID: 109992715
Gene Symbol: arl13a
Alias: zgc:73398
Full Name: ADP ribosylation factor like GTPase 13A
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 4820 bases
Position: chrFKLU01000238.1:696334-701153
Accession: 109992715
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038521	MMR_HSR1	PF01926.23	1.9e-06	1	1
ENSLBEP00000038520	MMR_HSR1	PF01926.23	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000040115	-	1164	-	ENSLBEP00000038521	387 (aa)	-	-
ENSLBET00000040114	-	2449	XM_020645440	ENSLBEP00000038520	441 (aa)	XP_020501096	UPI0009B3BF6C

Gene Model

Click here to download ENSLBEG00000028724's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028724's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000028724	arl13a	53	46.860	ENSLBEG00000014612	arl13b	63	41.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028724	arl13a	99	75.628	ENSACIG00000012235	arl13a	100	78.208	Amphilophus_citrinellus
ENSLBEG00000028724	arl13a	94	79.856	ENSAOCG00000024309	arl13a	96	80.815	Amphiprion_ocellaris
ENSLBEG00000028724	arl13a	99	82.353	ENSAPEG00000006626	arl13a	100	83.032	Amphiprion_percula
ENSLBEG00000028724	arl13a	99	81.757	ENSATEG00000018113	arl13a	100	82.658	Anabas_testudineus
ENSLBEG00000028724	arl13a	99	80.203	ENSACLG00000000738	arl13a	100	80.203	Astatotilapia_calliptera
ENSLBEG00000028724	arl13a	93	61.298	ENSAMXG00000021495	arl13a	98	61.244	Astyanax_mexicanus
ENSLBEG00000028724	arl13a	56	48.858	ENSCPBG00000014304	ARL13A	82	48.858	Chrysemys_picta_bellii
ENSLBEG00000028724	arl13a	52	41.463	ENSCGRG00001021947	Arl13a	53	41.463	Cricetulus_griseus_chok1gshd
ENSLBEG00000028724	arl13a	52	41.463	ENSCGRG00000007297	Arl13a	53	41.463	Cricetulus_griseus_crigri
ENSLBEG00000028724	arl13a	99	57.895	ENSCSEG00000002533	arl13a	99	61.631	Cynoglossus_semilaevis
ENSLBEG00000028724	arl13a	99	77.273	ENSCVAG00000005783	arl13a	99	76.364	Cyprinodon_variegatus
ENSLBEG00000028724	arl13a	99	67.882	ENSDARG00000052575	arl13a	99	67.882	Danio_rerio
ENSLBEG00000028724	arl13a	100	78.300	ENSFHEG00000017023	arl13a	100	77.578	Fundulus_heteroclitus
ENSLBEG00000028724	arl13a	100	77.201	ENSGAFG00000019994	arl13a	100	75.450	Gambusia_affinis
ENSLBEG00000028724	arl13a	99	71.394	ENSGACG00000017318	arl13a	99	77.482	Gasterosteus_aculeatus
ENSLBEG00000028724	arl13a	99	82.955	ENSHBUG00000016100	arl13a	100	82.955	Haplochromis_burtoni
ENSLBEG00000028724	arl13a	94	70.264	ENSHCOG00000005206	arl13a	100	69.690	Hippocampus_comes
ENSLBEG00000028724	arl13a	99	60.204	ENSIPUG00000017720	arl13a	98	61.183	Ictalurus_punctatus
ENSLBEG00000028724	arl13a	99	74.266	ENSKMAG00000001139	arl13a	99	74.266	Kryptolebias_marmoratus
ENSLBEG00000028724	arl13a	99	52.125	ENSLOCG00000015307	arl13a	99	52.009	Lepisosteus_oculatus
ENSLBEG00000028724	arl13a	94	74.171	ENSMAMG00000020385	arl13a	100	74.408	Mastacembelus_armatus
ENSLBEG00000028724	arl13a	99	82.955	ENSMZEG00005007052	arl13a	100	83.333	Maylandia_zebra
ENSLBEG00000028724	arl13a	52	41.951	ENSMAUG00000001355	-	51	41.951	Mesocricetus_auratus
ENSLBEG00000028724	arl13a	52	41.951	ENSMAUG00000010729	-	51	41.951	Mesocricetus_auratus
ENSLBEG00000028724	arl13a	99	73.146	ENSMMOG00000000880	arl13a	100	72.573	Mola_mola
ENSLBEG00000028724	arl13a	99	72.539	ENSMALG00000009029	arl13a	100	73.127	Monopterus_albus
ENSLBEG00000028724	arl13a	52	42.647	MGP_CAROLIEiJ_G0033386	Arl13a	53	42.647	Mus_caroli
ENSLBEG00000028724	arl13a	52	44.118	ENSMUSG00000052549	Arl13a	54	44.118	Mus_musculus
ENSLBEG00000028724	arl13a	52	44.118	MGP_PahariEiJ_G0031926	Arl13a	53	44.118	Mus_pahari
ENSLBEG00000028724	arl13a	52	44.118	MGP_SPRETEiJ_G0034551	Arl13a	53	44.118	Mus_spretus
ENSLBEG00000028724	arl13a	99	79.545	ENSNBRG00000021766	arl13a	100	79.293	Neolamprologus_brichardi
ENSLBEG00000028724	arl13a	93	83.614	ENSONIG00000002645	arl13a	100	83.614	Oreochromis_niloticus
ENSLBEG00000028724	arl13a	99	72.646	ENSORLG00000001425	arl13a	100	74.830	Oryzias_latipes
ENSLBEG00000028724	arl13a	99	73.923	ENSORLG00020021844	arl13a	100	74.830	Oryzias_latipes_hni
ENSLBEG00000028724	arl13a	99	72.870	ENSORLG00015011862	arl13a	100	75.057	Oryzias_latipes_hsok
ENSLBEG00000028724	arl13a	99	73.409	ENSOMEG00000015603	arl13a	100	74.545	Oryzias_melastigma
ENSLBEG00000028724	arl13a	99	54.222	ENSPKIG00000013558	arl13a	98	53.882	Paramormyrops_kingsleyae
ENSLBEG00000028724	arl13a	58	50.667	ENSPSIG00000003515	ARL13A	100	50.667	Pelodiscus_sinensis
ENSLBEG00000028724	arl13a	99	65.829	ENSPMGG00000017973	arl13a	100	67.470	Periophthalmus_magnuspinnatus
ENSLBEG00000028724	arl13a	100	75.621	ENSPFOG00000016707	arl13a	100	76.298	Poecilia_formosa
ENSLBEG00000028724	arl13a	100	72.010	ENSPLAG00000011307	arl13a	100	73.028	Poecilia_latipinna
ENSLBEG00000028724	arl13a	100	76.749	ENSPMEG00000017855	arl13a	100	78.104	Poecilia_mexicana
ENSLBEG00000028724	arl13a	100	76.749	ENSPREG00000011435	arl13a	100	78.104	Poecilia_reticulata
ENSLBEG00000028724	arl13a	99	79.949	ENSPNYG00000011485	arl13a	100	79.949	Pundamilia_nyererei
ENSLBEG00000028724	arl13a	52	43.627	ENSRNOG00000055454	Arl13a	51	43.627	Rattus_norvegicus
ENSLBEG00000028724	arl13a	93	59.806	ENSSFOG00015010065	arl13a	99	59.080	Scleropages_formosus
ENSLBEG00000028724	arl13a	99	72.127	ENSSMAG00000013557	arl13a	100	76.812	Scophthalmus_maximus
ENSLBEG00000028724	arl13a	99	79.897	ENSSDUG00000000933	arl13a	100	80.155	Seriola_dumerili
ENSLBEG00000028724	arl13a	99	81.674	ENSSLDG00000009973	arl13a	100	81.900	Seriola_lalandi_dorsalis
ENSLBEG00000028724	arl13a	99	75.065	ENSSPAG00000009109	arl13a	96	83.594	Stegastes_partitus
ENSLBEG00000028724	arl13a	99	74.065	ENSXCOG00000016270	arl13a	99	73.067	Xiphophorus_couchianus
ENSLBEG00000028724	arl13a	100	78.104	ENSXMAG00000013485	arl13a	100	77.652	Xiphophorus_maculatus