EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLBEG00000028842 (Gene tree)
Gene ID: -
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 1879 bases
Position: chrFKLU01009294.1:628-2506
Accession: ZDB-GENE-050306-33
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038680	Pept_tRNA_hydro	PF01195.19	6.5e-31	1	1
ENSLBEP00000038679	Pept_tRNA_hydro	PF01195.19	8.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000040287	-	558	-	ENSLBEP00000038679	185 (aa)	-	-
ENSLBET00000040288	-	507	-	ENSLBEP00000038680	168 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000028842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028842	ptrh1	75	59.524	ENSG00000187024	PTRH1	83	53.509	Homo_sapiens
ENSLBEG00000028842	ptrh1	75	53.175	ENSAMEG00000016791	PTRH1	58	53.175	Ailuropoda_melanoleuca
ENSLBEG00000028842	ptrh1	76	85.827	ENSACIG00000006734	ptrh1	61	81.560	Amphilophus_citrinellus
ENSLBEG00000028842	ptrh1	75	61.905	ENSANAG00000025547	PTRH1	71	54.615	Aotus_nancymaae
ENSLBEG00000028842	ptrh1	75	87.302	ENSACLG00000025462	ptrh1	50	87.302	Astatotilapia_calliptera
ENSLBEG00000028842	ptrh1	75	60.317	ENSCJAG00000019841	PTRH1	71	52.308	Callithrix_jacchus
ENSLBEG00000028842	ptrh1	84	48.077	ENSCAFG00000020123	PTRH1	73	48.077	Canis_familiaris
ENSLBEG00000028842	ptrh1	84	48.387	ENSCAFG00020015776	PTRH1	70	48.387	Canis_lupus_dingo
ENSLBEG00000028842	ptrh1	75	58.730	ENSCHIG00000008188	PTRH1	59	58.730	Capra_hircus
ENSLBEG00000028842	ptrh1	61	43.966	ENSCAPG00000015926	PTRH1	83	43.966	Cavia_aperea
ENSLBEG00000028842	ptrh1	75	58.730	ENSCPOG00000023968	PTRH1	73	49.682	Cavia_porcellus
ENSLBEG00000028842	ptrh1	75	60.317	ENSCCAG00000023134	PTRH1	61	59.459	Cebus_capucinus
ENSLBEG00000028842	ptrh1	75	59.524	ENSCATG00000042852	PTRH1	61	58.559	Cercocebus_atys
ENSLBEG00000028842	ptrh1	86	49.686	ENSCLAG00000011155	PTRH1	74	49.686	Chinchilla_lanigera
ENSLBEG00000028842	ptrh1	75	59.524	ENSCSAG00000013748	PTRH1	55	59.524	Chlorocebus_sabaeus
ENSLBEG00000028842	ptrh1	63	58.095	ENSCPBG00000025207	PTRH1	60	58.095	Chrysemys_picta_bellii
ENSLBEG00000028842	ptrh1	75	59.524	ENSCANG00000039856	PTRH1	61	58.559	Colobus_angolensis_palliatus
ENSLBEG00000028842	ptrh1	75	60.317	ENSCGRG00001013108	Ptrh1	62	60.317	Cricetulus_griseus_chok1gshd
ENSLBEG00000028842	ptrh1	75	60.317	ENSCGRG00000016553	Ptrh1	69	60.317	Cricetulus_griseus_crigri
ENSLBEG00000028842	ptrh1	81	75.912	ENSCSEG00000010332	ptrh1	50	75.912	Cynoglossus_semilaevis
ENSLBEG00000028842	ptrh1	65	85.455	ENSCVAG00000003873	-	80	85.455	Cyprinodon_variegatus
ENSLBEG00000028842	ptrh1	86	68.056	ENSDARG00000098206	ptrh1	75	63.158	Danio_rerio
ENSLBEG00000028842	ptrh1	75	60.317	ENSDNOG00000024194	PTRH1	59	60.317	Dasypus_novemcinctus
ENSLBEG00000028842	ptrh1	75	58.268	ENSDORG00000013321	Ptrh1	59	58.268	Dipodomys_ordii
ENSLBEG00000028842	ptrh1	75	59.524	ENSEASG00005020466	PTRH1	59	59.524	Equus_asinus_asinus
ENSLBEG00000028842	ptrh1	88	51.852	ENSECAG00000007615	PTRH1	60	51.852	Equus_caballus
ENSLBEG00000028842	ptrh1	80	79.259	ENSELUG00000015467	ptrh1	50	79.259	Esox_lucius
ENSLBEG00000028842	ptrh1	72	59.504	ENSFCAG00000001483	PTRH1	57	59.504	Felis_catus
ENSLBEG00000028842	ptrh1	76	56.693	ENSFALG00000001352	PTRH1	60	56.693	Ficedula_albicollis
ENSLBEG00000028842	ptrh1	75	59.524	ENSFDAG00000020077	PTRH1	62	59.524	Fukomys_damarensis
ENSLBEG00000028842	ptrh1	71	66.942	ENSGMOG00000009801	PTRH1	86	66.942	Gadus_morhua
ENSLBEG00000028842	ptrh1	75	84.921	ENSGAFG00000016215	ptrh1	53	84.921	Gambusia_affinis
ENSLBEG00000028842	ptrh1	75	85.714	ENSGACG00000014682	ptrh1	66	85.714	Gasterosteus_aculeatus
ENSLBEG00000028842	ptrh1	73	59.836	ENSGAGG00000022860	PTRH1	54	60.000	Gopherus_agassizii
ENSLBEG00000028842	ptrh1	75	58.730	ENSGGOG00000011033	PTRH1	61	57.658	Gorilla_gorilla
ENSLBEG00000028842	ptrh1	75	58.730	ENSHGLG00000019147	PTRH1	62	58.730	Heterocephalus_glaber_female
ENSLBEG00000028842	ptrh1	73	58.197	ENSHGLG00100003681	PTRH1	61	58.197	Heterocephalus_glaber_male
ENSLBEG00000028842	ptrh1	75	57.937	ENSSTOG00000008942	PTRH1	59	57.937	Ictidomys_tridecemlineatus
ENSLBEG00000028842	ptrh1	75	58.730	ENSJJAG00000014338	Ptrh1	61	58.730	Jaculus_jaculus
ENSLBEG00000028842	ptrh1	79	64.925	ENSLACG00000016741	PTRH1	55	64.925	Latimeria_chalumnae
ENSLBEG00000028842	ptrh1	67	58.929	ENSLAFG00000021934	PTRH1	55	58.929	Loxodonta_africana
ENSLBEG00000028842	ptrh1	75	59.524	ENSMFAG00000001700	PTRH1	61	58.559	Macaca_fascicularis
ENSLBEG00000028842	ptrh1	75	59.524	ENSMMUG00000016424	PTRH1	61	58.559	Macaca_mulatta
ENSLBEG00000028842	ptrh1	75	59.524	ENSMNEG00000033061	PTRH1	61	58.559	Macaca_nemestrina
ENSLBEG00000028842	ptrh1	85	84.028	ENSMAMG00000017386	ptrh1	53	84.028	Mastacembelus_armatus
ENSLBEG00000028842	ptrh1	75	86.508	ENSMZEG00005020001	ptrh1	50	86.508	Maylandia_zebra
ENSLBEG00000028842	ptrh1	75	59.524	ENSMAUG00000006266	Ptrh1	62	59.524	Mesocricetus_auratus
ENSLBEG00000028842	ptrh1	75	59.524	ENSMICG00000005611	PTRH1	61	58.559	Microcebus_murinus
ENSLBEG00000028842	ptrh1	75	59.524	ENSMOCG00000013992	Ptrh1	62	59.524	Microtus_ochrogaster
ENSLBEG00000028842	ptrh1	75	55.556	ENSMODG00000005503	PTRH1	58	55.556	Monodelphis_domestica
ENSLBEG00000028842	ptrh1	75	59.524	MGP_CAROLIEiJ_G0023450	Ptrh1	62	59.524	Mus_caroli
ENSLBEG00000028842	ptrh1	75	59.524	ENSMUSG00000053746	Ptrh1	62	59.524	Mus_musculus
ENSLBEG00000028842	ptrh1	75	59.524	MGP_PahariEiJ_G0024907	Ptrh1	62	59.524	Mus_pahari
ENSLBEG00000028842	ptrh1	75	60.317	MGP_SPRETEiJ_G0024367	Ptrh1	62	60.317	Mus_spretus
ENSLBEG00000028842	ptrh1	75	53.125	ENSMPUG00000013790	PTRH1	59	53.125	Mustela_putorius_furo
ENSLBEG00000028842	ptrh1	75	54.015	ENSMLUG00000013454	PTRH1	62	54.015	Myotis_lucifugus
ENSLBEG00000028842	ptrh1	75	59.524	ENSNGAG00000014008	Ptrh1	62	59.524	Nannospalax_galili
ENSLBEG00000028842	ptrh1	75	58.730	ENSNLEG00000017468	PTRH1	61	57.658	Nomascus_leucogenys
ENSLBEG00000028842	ptrh1	86	50.314	ENSODEG00000004012	PTRH1	75	50.314	Octodon_degus
ENSLBEG00000028842	ptrh1	75	57.143	ENSOANG00000011891	PTRH1	56	57.143	Ornithorhynchus_anatinus
ENSLBEG00000028842	ptrh1	75	57.937	ENSOCUG00000006894	PTRH1	55	57.937	Oryctolagus_cuniculus
ENSLBEG00000028842	ptrh1	75	58.730	ENSOGAG00000008094	PTRH1	60	58.730	Otolemur_garnettii
ENSLBEG00000028842	ptrh1	75	51.095	ENSOARG00000011808	PTRH1	58	51.095	Ovis_aries
ENSLBEG00000028842	ptrh1	75	59.524	ENSPPAG00000041782	PTRH1	61	58.559	Pan_paniscus
ENSLBEG00000028842	ptrh1	72	59.504	ENSPPRG00000007889	PTRH1	61	56.757	Panthera_pardus
ENSLBEG00000028842	ptrh1	75	59.524	ENSPTRG00000021394	PTRH1	61	58.559	Pan_troglodytes
ENSLBEG00000028842	ptrh1	65	56.250	ENSPANG00000031755	PTRH1	50	56.250	Papio_anubis
ENSLBEG00000028842	ptrh1	80	55.245	ENSPSIG00000013828	PTRH1	52	55.245	Pelodiscus_sinensis
ENSLBEG00000028842	ptrh1	83	59.184	ENSPMGG00000002148	ptrh1	64	57.664	Periophthalmus_magnuspinnatus
ENSLBEG00000028842	ptrh1	75	59.524	ENSPEMG00000014360	Ptrh1	62	59.524	Peromyscus_maniculatus_bairdii
ENSLBEG00000028842	ptrh1	75	86.508	ENSPLAG00000023354	ptrh1	50	86.508	Poecilia_latipinna
ENSLBEG00000028842	ptrh1	75	55.556	ENSPPYG00000019628	PTRH1	53	55.556	Pongo_abelii
ENSLBEG00000028842	ptrh1	75	59.524	ENSPCAG00000007016	PTRH1	59	59.524	Procavia_capensis
ENSLBEG00000028842	ptrh1	75	59.524	ENSPCOG00000014541	PTRH1	61	58.559	Propithecus_coquereli
ENSLBEG00000028842	ptrh1	75	59.524	ENSPVAG00000000954	PTRH1	59	59.524	Pteropus_vampyrus
ENSLBEG00000028842	ptrh1	75	61.111	ENSRNOG00000049034	Ptrh1	62	61.111	Rattus_norvegicus
ENSLBEG00000028842	ptrh1	75	59.524	ENSRBIG00000027290	PTRH1	61	58.559	Rhinopithecus_bieti
ENSLBEG00000028842	ptrh1	75	59.524	ENSRROG00000028799	PTRH1	61	58.559	Rhinopithecus_roxellana
ENSLBEG00000028842	ptrh1	70	33.607	YHR189W	PTH1	64	33.607	Saccharomyces_cerevisiae
ENSLBEG00000028842	ptrh1	75	59.524	ENSSBOG00000026699	PTRH1	61	58.559	Saimiri_boliviensis_boliviensis
ENSLBEG00000028842	ptrh1	75	54.962	ENSSHAG00000018238	PTRH1	64	54.962	Sarcophilus_harrisii
ENSLBEG00000028842	ptrh1	76	71.654	ENSSFOG00015007053	ptrh1	63	71.654	Scleropages_formosus
ENSLBEG00000028842	ptrh1	75	85.039	ENSSMAG00000016747	ptrh1	60	80.851	Scophthalmus_maximus
ENSLBEG00000028842	ptrh1	81	83.212	ENSSDUG00000013471	ptrh1	63	88.136	Seriola_dumerili
ENSLBEG00000028842	ptrh1	75	86.614	ENSSLDG00000024662	ptrh1	56	86.614	Seriola_lalandi_dorsalis
ENSLBEG00000028842	ptrh1	75	54.762	ENSSPUG00000000040	PTRH1	55	54.762	Sphenodon_punctatus
ENSLBEG00000028842	ptrh1	76	85.039	ENSSPAG00000003298	ptrh1	64	85.039	Stegastes_partitus
ENSLBEG00000028842	ptrh1	75	60.317	ENSSSCG00000005615	PTRH1	59	60.317	Sus_scrofa
ENSLBEG00000028842	ptrh1	75	56.349	ENSTGUG00000003648	PTRH1	94	56.349	Taeniopygia_guttata
ENSLBEG00000028842	ptrh1	83	79.021	ENSTNIG00000016735	ptrh1	63	79.021	Tetraodon_nigroviridis
ENSLBEG00000028842	ptrh1	75	53.968	ENSTTRG00000016458	PTRH1	59	53.968	Tursiops_truncatus
ENSLBEG00000028842	ptrh1	75	57.143	ENSUAMG00000023948	-	57	57.143	Ursus_americanus
ENSLBEG00000028842	ptrh1	75	44.444	ENSVPAG00000001805	PTRH1	69	44.444	Vicugna_pacos
ENSLBEG00000028842	ptrh1	84	48.387	ENSVVUG00000013198	PTRH1	70	48.387	Vulpes_vulpes
ENSLBEG00000028842	ptrh1	76	57.031	ENSXETG00000009980	ptrh1	68	57.031	Xenopus_tropicalis
ENSLBEG00000028842	ptrh1	83	76.429	ENSXCOG00000011498	ptrh1	63	73.469	Xiphophorus_couchianus