EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000028983 (Gene tree)
Gene ID: 109979800
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Minus strand
Length: 9191 bases
Position: chrFKLU01009702.1:21-9211
Accession: 109979800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038807	ARS2	PF04959.13	3.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000040457	-	3441	XM_020628521	ENSLBEP00000038807	641 (aa)	XP_020484177	-

Gene Model

Click here to download ENSLBEG00000028983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000028983's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000028983	-	73	68.327	ENSLBEG00000016308	srrt	52	66.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000028983	-	71	67.719	ENSACIG00000015795	srrt	55	65.461	Amphilophus_citrinellus
ENSLBEG00000028983	-	81	67.719	ENSAOCG00000009693	srrt	65	65.461	Amphiprion_ocellaris
ENSLBEG00000028983	-	97	78.617	ENSAOCG00000009189	-	66	79.236	Amphiprion_ocellaris
ENSLBEG00000028983	-	72	67.719	ENSAPEG00000003646	srrt	56	65.493	Amphiprion_percula
ENSLBEG00000028983	-	97	78.617	ENSAPEG00000020016	-	68	79.236	Amphiprion_percula
ENSLBEG00000028983	-	54	86.705	ENSATEG00000003652	-	63	87.464	Anabas_testudineus
ENSLBEG00000028983	-	71	67.368	ENSATEG00000014425	srrt	54	65.132	Anabas_testudineus
ENSLBEG00000028983	-	97	76.527	ENSACLG00000009423	-	66	78.073	Astatotilapia_calliptera
ENSLBEG00000028983	-	69	41.129	WBGene00017085	E01A2.2	59	40.833	Caenorhabditis_elegans
ENSLBEG00000028983	-	75	64.685	ENSCLAG00000007568	SRRT	59	62.951	Chinchilla_lanigera
ENSLBEG00000028983	-	66	57.143	ENSCHOG00000007815	SRRT	59	63.934	Choloepus_hoffmanni
ENSLBEG00000028983	-	90	51.546	ENSCSAVG00000008394	-	67	51.056	Ciona_savignyi
ENSLBEG00000028983	-	55	66.234	ENSCGRG00000007292	Srrt	58	56.958	Cricetulus_griseus_crigri
ENSLBEG00000028983	-	79	84.726	ENSCSEG00000005233	-	55	86.777	Cynoglossus_semilaevis
ENSLBEG00000028983	-	97	52.044	ENSCVAG00000019848	srrt	58	64.626	Cyprinodon_variegatus
ENSLBEG00000028983	-	99	71.339	ENSCVAG00000017344	-	70	68.842	Cyprinodon_variegatus
ENSLBEG00000028983	-	56	63.636	ENSEBUG00000008517	-	52	63.636	Eptatretus_burgeri
ENSLBEG00000028983	-	97	63.850	ENSELUG00000021216	-	66	61.120	Esox_lucius
ENSLBEG00000028983	-	63	67.241	ENSFHEG00000002756	srrt	51	67.241	Fundulus_heteroclitus
ENSLBEG00000028983	-	68	79.577	ENSGMOG00000018694	-	53	78.621	Gadus_morhua
ENSLBEG00000028983	-	97	62.963	ENSGAFG00000020383	-	64	64.073	Gambusia_affinis
ENSLBEG00000028983	-	55	74.462	ENSGACG00000001100	-	66	68.770	Gasterosteus_aculeatus
ENSLBEG00000028983	-	96	49.921	ENSHGLG00000008344	Srrt	58	57.003	Heterocephalus_glaber_female
ENSLBEG00000028983	-	97	50.396	ENSHCOG00000005403	srrt	62	63.514	Hippocampus_comes
ENSLBEG00000028983	-	99	65.669	ENSHCOG00000008904	-	64	63.894	Hippocampus_comes
ENSLBEG00000028983	-	96	50.556	ENSJJAG00000010446	Srrt	59	58.632	Jaculus_jaculus
ENSLBEG00000028983	-	73	65.529	ENSKMAG00000013599	srrt	52	65.306	Kryptolebias_marmoratus
ENSLBEG00000028983	-	97	72.990	ENSKMAG00000008468	-	65	74.419	Kryptolebias_marmoratus
ENSLBEG00000028983	-	97	79.839	ENSMAMG00000010681	-	66	79.402	Mastacembelus_armatus
ENSLBEG00000028983	-	97	76.527	ENSMZEG00005028002	-	66	78.073	Maylandia_zebra
ENSLBEG00000028983	-	76	66.784	ENSMMOG00000016399	srrt	53	64.883	Mola_mola
ENSLBEG00000028983	-	61	60.588	ENSMALG00000005567	-	55	67.677	Monopterus_albus
ENSLBEG00000028983	-	96	48.811	MGP_PahariEiJ_G0024456	Srrt	59	58.306	Mus_pahari
ENSLBEG00000028983	-	97	76.849	ENSONIG00000016080	-	65	77.076	Oreochromis_niloticus
ENSLBEG00000028983	-	98	51.962	ENSOMEG00000003155	srrt	56	65.789	Oryzias_melastigma
ENSLBEG00000028983	-	97	71.176	ENSOMEG00000006963	-	65	71.358	Oryzias_melastigma
ENSLBEG00000028983	-	79	64.883	ENSPKIG00000005434	srrt	57	64.452	Paramormyrops_kingsleyae
ENSLBEG00000028983	-	70	66.431	ENSPMGG00000002841	srrt	53	64.726	Periophthalmus_magnuspinnatus
ENSLBEG00000028983	-	97	65.539	ENSPFOG00000016554	-	64	67.055	Poecilia_formosa
ENSLBEG00000028983	-	97	65.056	ENSPLAG00000004526	-	63	64.415	Poecilia_latipinna
ENSLBEG00000028983	-	97	65.539	ENSPMEG00000001520	-	66	67.055	Poecilia_mexicana
ENSLBEG00000028983	-	78	64.828	ENSPMEG00000001182	srrt	53	65.347	Poecilia_mexicana
ENSLBEG00000028983	-	64	51.399	ENSPVAG00000000834	SRRT	56	54.795	Pteropus_vampyrus
ENSLBEG00000028983	-	81	67.368	ENSSMAG00000015342	srrt	64	65.132	Scophthalmus_maximus
ENSLBEG00000028983	-	71	67.719	ENSSDUG00000012049	srrt	65	48.562	Seriola_dumerili
ENSLBEG00000028983	-	71	68.571	ENSSLDG00000017477	srrt	53	65.781	Seriola_lalandi_dorsalis
ENSLBEG00000028983	-	97	78.331	ENSSPAG00000018943	-	70	80.265	Stegastes_partitus
ENSLBEG00000028983	-	97	71.176	ENSTRUG00000000023	-	65	70.216	Takifugu_rubripes
ENSLBEG00000028983	-	97	66.456	ENSTNIG00000003111	-	65	66.939	Tetraodon_nigroviridis
ENSLBEG00000028983	-	99	64.882	ENSXMAG00000002090	-	64	67.554	Xiphophorus_maculatus
ENSLBEG00000028983	-	97	52.673	ENSXMAG00000007627	srrt	55	65.347	Xiphophorus_maculatus