EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSLBEG00000029018 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Labrus_bergylta
Status: putative
Strand: Plus strand
Length: 5104 bases
Position: chrFKLU01009864.1:3539-8642
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLBEP00000038843	RVT_1	PF00078.27	9.7e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLBET00000040499	-	5104	-	ENSLBEP00000038843	1144 (aa)	-	-

Gene Model

Click here to download ENSLBEG00000029018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLBEG00000029018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSLBEG00000029018	-	99	40.870	ENSLBEG00000008483	-	86	40.870
ENSLBEG00000029018	-	80	54.803	ENSLBEG00000011646	-	95	54.803
ENSLBEG00000029018	-	70	54.545	ENSLBEG00000013480	-	86	54.545
ENSLBEG00000029018	-	72	42.515	ENSLBEG00000009538	-	86	42.515
ENSLBEG00000029018	-	99	40.870	ENSLBEG00000007968	-	86	40.870
ENSLBEG00000029018	-	72	42.635	ENSLBEG00000016824	-	86	42.635
ENSLBEG00000029018	-	72	42.635	ENSLBEG00000015201	-	86	42.635
ENSLBEG00000029018	-	64	41.949	ENSLBEG00000022930	-	90	41.949
ENSLBEG00000029018	-	65	55.391	ENSLBEG00000029028	-	79	55.405
ENSLBEG00000029018	-	86	99.191	ENSLBEG00000008622	-	100	99.191
ENSLBEG00000029018	-	99	40.870	ENSLBEG00000012182	-	86	40.870
ENSLBEG00000029018	-	99	40.957	ENSLBEG00000007872	-	86	40.957
ENSLBEG00000029018	-	81	43.469	ENSLBEG00000008569	-	90	43.362
ENSLBEG00000029018	-	72	42.635	ENSLBEG00000014347	-	86	42.635
ENSLBEG00000029018	-	72	42.635	ENSLBEG00000011022	-	90	42.635

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLBEG00000029018	-	99	57.780	ENSATEG00000021554	-	87	57.780	Anabas_testudineus
ENSLBEG00000029018	-	90	41.051	ENSAMXG00000037575	-	95	41.051	Astyanax_mexicanus
ENSLBEG00000029018	-	99	47.249	ENSDARG00000098779	BX547930.4	87	47.249	Danio_rerio
ENSLBEG00000029018	-	51	30.588	ENSDARG00000098557	BX323564.1	60	30.413	Danio_rerio
ENSLBEG00000029018	-	99	54.331	ENSDARG00000101795	CABZ01033394.1	86	54.331	Danio_rerio
ENSLBEG00000029018	-	99	50.087	ENSDARG00000105157	BX649434.3	86	50.087	Danio_rerio
ENSLBEG00000029018	-	99	40.731	ENSDARG00000100303	CU638714.1	86	40.644	Danio_rerio
ENSLBEG00000029018	-	99	54.016	ENSGMOG00000001470	-	87	53.751	Gadus_morhua
ENSLBEG00000029018	-	99	58.385	ENSGACG00000000122	-	85	58.385	Gasterosteus_aculeatus
ENSLBEG00000029018	-	73	71.928	ENSKMAG00000017599	-	94	71.928	Kryptolebias_marmoratus
ENSLBEG00000029018	-	99	40.628	ENSORLG00000024845	-	86	40.628	Oryzias_latipes
ENSLBEG00000029018	-	86	65.615	ENSORLG00000024114	-	88	65.615	Oryzias_latipes
ENSLBEG00000029018	-	99	40.453	ENSORLG00020022348	-	86	40.453	Oryzias_latipes_hni
ENSLBEG00000029018	-	99	38.394	ENSOMEG00000013951	-	86	38.394	Oryzias_melastigma
ENSLBEG00000029018	-	99	51.619	ENSSDUG00000006191	-	86	51.881	Seriola_dumerili
ENSLBEG00000029018	-	99	66.491	ENSXMAG00000028545	-	88	66.491	Xiphophorus_maculatus
ENSLBEG00000029018	-	99	50.306	ENSXMAG00000028372	-	89	50.306	Xiphophorus_maculatus
ENSLBEG00000029018	-	99	65.435	ENSXMAG00000024932	-	86	65.435	Xiphophorus_maculatus
ENSLBEG00000029018	-	99	65.347	ENSXMAG00000025449	-	86	65.347	Xiphophorus_maculatus