EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSLOCG00000000012 (Gene tree)
Gene ID: 102694129
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Lepisosteus_oculatus
Status: putative
Strand: Plus strand
Length: 13851 bases
Position: chrJH591481.1:88642-102492
Accession: 102694129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSLOCP00000000018	CPSF_A	PF03178.15	1.1e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSLOCT00000000018	-	3833	XM_006643262	ENSLOCP00000000018	1044 (aa)	-	W5LV61

Gene Model

Click here to download ENSLOCG00000000012's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSLOCG00000000012's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSLOCG00000000012	ddb1	100	83.333	ENSG00000167986	DDB1	98	95.327	Homo_sapiens
ENSLOCG00000000012	ddb1	98	87.987	ENSAPOG00000005036	ddb1	91	86.877	Acanthochromis_polyacanthus
ENSLOCG00000000012	ddb1	100	83.333	ENSAMEG00000016518	DDB1	92	83.333	Ailuropoda_melanoleuca
ENSLOCG00000000012	ddb1	84	86.352	ENSACIG00000020624	ddb1	91	86.352	Amphilophus_citrinellus
ENSLOCG00000000012	ddb1	100	88.432	ENSAOCG00000003066	ddb1	92	88.432	Amphiprion_ocellaris
ENSLOCG00000000012	ddb1	100	88.324	ENSAPEG00000000092	ddb1	92	88.324	Amphiprion_percula
ENSLOCG00000000012	ddb1	93	88.084	ENSATEG00000020571	ddb1	89	88.084	Anabas_testudineus
ENSLOCG00000000012	ddb1	99	82.486	ENSAPLG00000007174	DDB1	91	82.486	Anas_platyrhynchos
ENSLOCG00000000012	ddb1	100	82.703	ENSACAG00000017758	DDB1	92	82.703	Anolis_carolinensis
ENSLOCG00000000012	ddb1	100	83.333	ENSANAG00000021878	DDB1	92	83.333	Aotus_nancymaae
ENSLOCG00000000012	ddb1	100	87.676	ENSACLG00000012401	ddb1	92	87.676	Astatotilapia_calliptera
ENSLOCG00000000012	ddb1	100	83.333	ENSBTAG00000021569	DDB1	86	83.333	Bos_taurus
ENSLOCG00000000012	ddb1	98	37.346	WBGene00010890	ddb-1	90	37.346	Caenorhabditis_elegans
ENSLOCG00000000012	ddb1	100	83.333	ENSCJAG00000019319	DDB1	92	83.333	Callithrix_jacchus
ENSLOCG00000000012	ddb1	100	83.333	ENSCAFG00000016264	DDB1	92	83.333	Canis_familiaris
ENSLOCG00000000012	ddb1	94	83.333	ENSCAFG00020012722	DDB1	91	83.333	Canis_lupus_dingo
ENSLOCG00000000012	ddb1	100	83.333	ENSCHIG00000014969	DDB1	92	83.333	Capra_hircus
ENSLOCG00000000012	ddb1	100	82.540	ENSTSYG00000008027	DDB1	92	82.540	Carlito_syrichta
ENSLOCG00000000012	ddb1	99	82.193	ENSCAPG00000010786	DDB1	93	82.193	Cavia_aperea
ENSLOCG00000000012	ddb1	100	82.540	ENSCPOG00000009956	DDB1	93	82.540	Cavia_porcellus
ENSLOCG00000000012	ddb1	100	83.333	ENSCCAG00000035883	DDB1	92	83.333	Cebus_capucinus
ENSLOCG00000000012	ddb1	100	83.333	ENSCATG00000044495	DDB1	92	83.333	Cercocebus_atys
ENSLOCG00000000012	ddb1	100	83.333	ENSCLAG00000004126	DDB1	92	83.333	Chinchilla_lanigera
ENSLOCG00000000012	ddb1	100	83.333	ENSCSAG00000006392	DDB1	92	83.333	Chlorocebus_sabaeus
ENSLOCG00000000012	ddb1	82	93.458	ENSCHOG00000011377	DDB1	77	93.458	Choloepus_hoffmanni
ENSLOCG00000000012	ddb1	100	82.595	ENSCPBG00000017728	DDB1	92	82.595	Chrysemys_picta_bellii
ENSLOCG00000000012	ddb1	99	64.486	ENSCING00000007437	-	90	64.486	Ciona_intestinalis
ENSLOCG00000000012	ddb1	89	56.656	ENSCSAVG00000004783	-	92	51.633	Ciona_savignyi
ENSLOCG00000000012	ddb1	100	83.333	ENSCANG00000019948	DDB1	92	83.333	Colobus_angolensis_palliatus
ENSLOCG00000000012	ddb1	100	83.333	ENSCGRG00001016599	Ddb1	92	83.333	Cricetulus_griseus_chok1gshd
ENSLOCG00000000012	ddb1	100	83.333	ENSCGRG00000013427	Ddb1	92	83.333	Cricetulus_griseus_crigri
ENSLOCG00000000012	ddb1	92	87.544	ENSCSEG00000012499	ddb1	91	86.483	Cynoglossus_semilaevis
ENSLOCG00000000012	ddb1	93	86.814	ENSCVAG00000019531	ddb1	91	86.814	Cyprinodon_variegatus
ENSLOCG00000000012	ddb1	100	86.393	ENSDARG00000074431	ddb1	92	86.393	Danio_rerio
ENSLOCG00000000012	ddb1	94	83.333	ENSDNOG00000014884	DDB1	90	83.333	Dasypus_novemcinctus
ENSLOCG00000000012	ddb1	84	83.333	ENSDORG00000000127	Ddb1	90	83.333	Dipodomys_ordii
ENSLOCG00000000012	ddb1	99	60.748	FBgn0260962	pic	90	60.748	Drosophila_melanogaster
ENSLOCG00000000012	ddb1	65	91.667	ENSETEG00000001053	-	60	91.667	Echinops_telfairi
ENSLOCG00000000012	ddb1	75	84.071	ENSEBUG00000014593	ddb1	86	84.071	Eptatretus_burgeri
ENSLOCG00000000012	ddb1	100	83.333	ENSEASG00005008184	DDB1	92	83.333	Equus_asinus_asinus
ENSLOCG00000000012	ddb1	100	83.333	ENSECAG00000012136	DDB1	92	83.333	Equus_caballus
ENSLOCG00000000012	ddb1	83	94.737	ENSEEUG00000003194	DDB1	76	94.737	Erinaceus_europaeus
ENSLOCG00000000012	ddb1	100	87.784	ENSELUG00000023868	ddb1	92	87.784	Esox_lucius
ENSLOCG00000000012	ddb1	100	83.333	ENSFCAG00000029716	DDB1	92	83.333	Felis_catus
ENSLOCG00000000012	ddb1	100	82.595	ENSFALG00000011981	DDB1	92	82.595	Ficedula_albicollis
ENSLOCG00000000012	ddb1	100	83.333	ENSFDAG00000005128	DDB1	92	83.333	Fukomys_damarensis
ENSLOCG00000000012	ddb1	89	93.798	ENSFHEG00000022133	ddb1	91	93.798	Fundulus_heteroclitus
ENSLOCG00000000012	ddb1	76	96.316	ENSGMOG00000019386	ddb1	82	96.316	Gadus_morhua
ENSLOCG00000000012	ddb1	100	83.333	ENSGALG00000042333	DDB1	92	83.333	Gallus_gallus
ENSLOCG00000000012	ddb1	94	86.977	ENSGAFG00000013142	ddb1	91	86.977	Gambusia_affinis
ENSLOCG00000000012	ddb1	95	86.073	ENSGACG00000017182	ddb1	92	86.073	Gasterosteus_aculeatus
ENSLOCG00000000012	ddb1	95	82.595	ENSGAGG00000014124	DDB1	92	82.595	Gopherus_agassizii
ENSLOCG00000000012	ddb1	100	83.333	ENSGGOG00000004052	DDB1	92	83.333	Gorilla_gorilla
ENSLOCG00000000012	ddb1	100	87.676	ENSHBUG00000008873	ddb1	92	87.676	Haplochromis_burtoni
ENSLOCG00000000012	ddb1	100	83.333	ENSHGLG00000018430	DDB1	92	83.333	Heterocephalus_glaber_female
ENSLOCG00000000012	ddb1	100	83.333	ENSHGLG00100014475	DDB1	92	83.333	Heterocephalus_glaber_male
ENSLOCG00000000012	ddb1	95	86.353	ENSHCOG00000018670	ddb1	91	86.353	Hippocampus_comes
ENSLOCG00000000012	ddb1	100	87.243	ENSIPUG00000005612	DDB1	92	87.243	Ictalurus_punctatus
ENSLOCG00000000012	ddb1	100	83.333	ENSSTOG00000007552	DDB1	92	83.333	Ictidomys_tridecemlineatus
ENSLOCG00000000012	ddb1	100	83.333	ENSJJAG00000017769	Ddb1	92	83.333	Jaculus_jaculus
ENSLOCG00000000012	ddb1	93	87.048	ENSKMAG00000002315	ddb1	91	87.048	Kryptolebias_marmoratus
ENSLOCG00000000012	ddb1	83	86.877	ENSLBEG00000017065	ddb1	89	86.877	Labrus_bergylta
ENSLOCG00000000012	ddb1	100	84.921	ENSLACG00000017611	DDB1	92	84.921	Latimeria_chalumnae
ENSLOCG00000000012	ddb1	100	83.333	ENSLAFG00000011513	DDB1	92	83.333	Loxodonta_africana
ENSLOCG00000000012	ddb1	100	83.333	ENSMFAG00000042035	DDB1	92	83.333	Macaca_fascicularis
ENSLOCG00000000012	ddb1	99	83.333	ENSMMUG00000002691	DDB1	100	89.474	Macaca_mulatta
ENSLOCG00000000012	ddb1	100	83.333	ENSMNEG00000031559	DDB1	92	83.333	Macaca_nemestrina
ENSLOCG00000000012	ddb1	100	83.333	ENSMLEG00000044136	DDB1	92	83.333	Mandrillus_leucophaeus
ENSLOCG00000000012	ddb1	100	88.649	ENSMAMG00000014372	ddb1	92	88.649	Mastacembelus_armatus
ENSLOCG00000000012	ddb1	100	87.676	ENSMZEG00005013835	ddb1	92	87.676	Maylandia_zebra
ENSLOCG00000000012	ddb1	93	82.486	ENSMGAG00000004990	DDB1	91	82.486	Meleagris_gallopavo
ENSLOCG00000000012	ddb1	100	83.333	ENSMAUG00000012926	Ddb1	92	83.333	Mesocricetus_auratus
ENSLOCG00000000012	ddb1	100	83.333	ENSMICG00000013703	DDB1	92	83.333	Microcebus_murinus
ENSLOCG00000000012	ddb1	100	82.540	ENSMOCG00000020499	Ddb1	92	82.540	Microtus_ochrogaster
ENSLOCG00000000012	ddb1	84	86.877	ENSMMOG00000001758	ddb1	91	86.877	Mola_mola
ENSLOCG00000000012	ddb1	96	87.500	ENSMODG00000020353	DDB1	88	87.500	Monodelphis_domestica
ENSLOCG00000000012	ddb1	100	88.432	ENSMALG00000014071	ddb1	92	88.432	Monopterus_albus
ENSLOCG00000000012	ddb1	100	83.333	MGP_CAROLIEiJ_G0022695	Ddb1	92	83.333	Mus_caroli
ENSLOCG00000000012	ddb1	100	83.333	ENSMUSG00000024740	Ddb1	92	83.333	Mus_musculus
ENSLOCG00000000012	ddb1	100	83.333	MGP_PahariEiJ_G0014189	Ddb1	92	83.333	Mus_pahari
ENSLOCG00000000012	ddb1	100	83.333	MGP_SPRETEiJ_G0023609	Ddb1	92	83.333	Mus_spretus
ENSLOCG00000000012	ddb1	100	83.333	ENSMPUG00000014200	DDB1	92	83.333	Mustela_putorius_furo
ENSLOCG00000000012	ddb1	100	83.333	ENSMLUG00000013232	DDB1	92	83.333	Myotis_lucifugus
ENSLOCG00000000012	ddb1	100	83.333	ENSNGAG00000009384	Ddb1	92	83.333	Nannospalax_galili
ENSLOCG00000000012	ddb1	100	87.784	ENSNBRG00000019581	ddb1	92	87.784	Neolamprologus_brichardi
ENSLOCG00000000012	ddb1	100	83.333	ENSNLEG00000002022	DDB1	92	83.333	Nomascus_leucogenys
ENSLOCG00000000012	ddb1	89	92.334	ENSMEUG00000001099	DDB1	85	92.334	Notamacropus_eugenii
ENSLOCG00000000012	ddb1	89	73.405	ENSOPRG00000008254	DDB1	81	73.405	Ochotona_princeps
ENSLOCG00000000012	ddb1	100	83.333	ENSODEG00000002419	DDB1	92	83.333	Octodon_degus
ENSLOCG00000000012	ddb1	100	87.784	ENSONIG00000005804	ddb1	92	87.784	Oreochromis_niloticus
ENSLOCG00000000012	ddb1	89	82.811	ENSOANG00000004897	DDB1	89	82.811	Ornithorhynchus_anatinus
ENSLOCG00000000012	ddb1	100	83.333	ENSOCUG00000001667	DDB1	92	83.333	Oryctolagus_cuniculus
ENSLOCG00000000012	ddb1	93	87.150	ENSORLG00000001399	ddb1	90	85.578	Oryzias_latipes
ENSLOCG00000000012	ddb1	93	87.033	ENSORLG00020001277	ddb1	87	87.033	Oryzias_latipes_hni
ENSLOCG00000000012	ddb1	94	86.574	ENSORLG00015002080	ddb1	91	86.574	Oryzias_latipes_hsok
ENSLOCG00000000012	ddb1	96	85.601	ENSOMEG00000006181	ddb1	91	85.601	Oryzias_melastigma
ENSLOCG00000000012	ddb1	100	83.333	ENSOGAG00000016103	DDB1	92	83.333	Otolemur_garnettii
ENSLOCG00000000012	ddb1	98	83.333	ENSOARG00000011716	DDB1	90	83.333	Ovis_aries
ENSLOCG00000000012	ddb1	100	83.333	ENSPPAG00000035343	DDB1	92	83.333	Pan_paniscus
ENSLOCG00000000012	ddb1	100	83.333	ENSPPRG00000013300	DDB1	92	83.333	Panthera_pardus
ENSLOCG00000000012	ddb1	98	82.378	ENSPTIG00000006909	DDB1	90	82.378	Panthera_tigris_altaica
ENSLOCG00000000012	ddb1	100	83.333	ENSPTRG00000003737	DDB1	92	83.333	Pan_troglodytes
ENSLOCG00000000012	ddb1	100	83.333	ENSPANG00000000242	DDB1	92	83.333	Papio_anubis
ENSLOCG00000000012	ddb1	95	86.338	ENSPKIG00000019213	ddb1	87	86.338	Paramormyrops_kingsleyae
ENSLOCG00000000012	ddb1	98	82.416	ENSPSIG00000013275	DDB1	92	82.416	Pelodiscus_sinensis
ENSLOCG00000000012	ddb1	84	86.877	ENSPMGG00000021179	ddb1	91	86.877	Periophthalmus_magnuspinnatus
ENSLOCG00000000012	ddb1	100	83.333	ENSPEMG00000012241	Ddb1	92	83.333	Peromyscus_maniculatus_bairdii
ENSLOCG00000000012	ddb1	88	79.390	ENSPMAG00000008479	ddb1	91	79.390	Petromyzon_marinus
ENSLOCG00000000012	ddb1	100	83.333	ENSPCIG00000002643	DDB1	92	83.333	Phascolarctos_cinereus
ENSLOCG00000000012	ddb1	100	87.243	ENSPFOG00000002768	ddb1	92	87.243	Poecilia_formosa
ENSLOCG00000000012	ddb1	100	87.135	ENSPLAG00000017227	ddb1	92	87.135	Poecilia_latipinna
ENSLOCG00000000012	ddb1	100	87.135	ENSPMEG00000011398	ddb1	92	87.135	Poecilia_mexicana
ENSLOCG00000000012	ddb1	93	87.266	ENSPREG00000004440	ddb1	89	87.266	Poecilia_reticulata
ENSLOCG00000000012	ddb1	100	83.333	ENSPPYG00000003193	DDB1	92	83.333	Pongo_abelii
ENSLOCG00000000012	ddb1	86	94.156	ENSPCAG00000011040	DDB1	78	94.156	Procavia_capensis
ENSLOCG00000000012	ddb1	100	83.333	ENSPCOG00000015176	DDB1	92	83.333	Propithecus_coquereli
ENSLOCG00000000012	ddb1	100	83.333	ENSPVAG00000003847	DDB1	92	83.333	Pteropus_vampyrus
ENSLOCG00000000012	ddb1	53	90.811	ENSPNYG00000010482	ddb1	99	90.811	Pundamilia_nyererei
ENSLOCG00000000012	ddb1	94	87.311	ENSPNAG00000006635	ddb1	89	87.311	Pygocentrus_nattereri
ENSLOCG00000000012	ddb1	100	83.333	ENSRNOG00000020715	Ddb1	92	83.333	Rattus_norvegicus
ENSLOCG00000000012	ddb1	100	83.333	ENSRBIG00000033611	DDB1	92	83.333	Rhinopithecus_bieti
ENSLOCG00000000012	ddb1	100	83.333	ENSRROG00000041407	DDB1	92	83.333	Rhinopithecus_roxellana
ENSLOCG00000000012	ddb1	100	83.333	ENSSBOG00000019775	DDB1	92	83.333	Saimiri_boliviensis_boliviensis
ENSLOCG00000000012	ddb1	93	80.900	ENSSHAG00000011600	DDB1	90	80.900	Sarcophilus_harrisii
ENSLOCG00000000012	ddb1	94	86.891	ENSSFOG00015011151	ddb1	89	86.891	Scleropages_formosus
ENSLOCG00000000012	ddb1	100	88.324	ENSSMAG00000009495	ddb1	92	88.324	Scophthalmus_maximus
ENSLOCG00000000012	ddb1	100	88.324	ENSSDUG00000004642	ddb1	92	88.324	Seriola_dumerili
ENSLOCG00000000012	ddb1	100	88.324	ENSSLDG00000015804	ddb1	92	88.324	Seriola_lalandi_dorsalis
ENSLOCG00000000012	ddb1	71	94.340	ENSSARG00000003290	-	67	94.340	Sorex_araneus
ENSLOCG00000000012	ddb1	100	83.333	ENSSPUG00000019338	DDB1	92	83.333	Sphenodon_punctatus
ENSLOCG00000000012	ddb1	93	88.084	ENSSPAG00000009888	ddb1	91	88.084	Stegastes_partitus
ENSLOCG00000000012	ddb1	100	83.333	ENSSSCG00000013094	DDB1	92	83.333	Sus_scrofa
ENSLOCG00000000012	ddb1	100	84.127	ENSTGUG00000006414	DDB1	92	84.127	Taeniopygia_guttata
ENSLOCG00000000012	ddb1	93	97.196	ENSTRUG00000016682	ddb1	89	97.196	Takifugu_rubripes
ENSLOCG00000000012	ddb1	89	81.769	ENSTNIG00000009565	ddb1	92	81.769	Tetraodon_nigroviridis
ENSLOCG00000000012	ddb1	92	95.294	ENSTTRG00000011055	DDB1	85	95.294	Tursiops_truncatus
ENSLOCG00000000012	ddb1	94	83.333	ENSUAMG00000017793	DDB1	86	83.333	Ursus_americanus
ENSLOCG00000000012	ddb1	94	83.333	ENSUMAG00000011788	DDB1	90	83.333	Ursus_maritimus
ENSLOCG00000000012	ddb1	89	81.905	ENSVPAG00000007963	DDB1	83	81.905	Vicugna_pacos
ENSLOCG00000000012	ddb1	100	83.333	ENSVVUG00000004987	DDB1	100	80.917	Vulpes_vulpes
ENSLOCG00000000012	ddb1	100	84.921	ENSXETG00000008820	ddb1	92	84.921	Xenopus_tropicalis
ENSLOCG00000000012	ddb1	84	86.220	ENSXCOG00000013956	ddb1	91	86.220	Xiphophorus_couchianus
ENSLOCG00000000012	ddb1	94	87.093	ENSXMAG00000000022	ddb1	91	87.093	Xiphophorus_maculatus